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The map label for this gene is lsrG [H]

Identifier: 29143844

GI number: 29143844

Start: 3641692

End: 3642021

Strand: Reverse

Name: lsrG [H]

Synonym: t3539

Alternate gene names: 29143844

Gene position: 3642021-3641692 (Counterclockwise)

Preceding gene: 29143845

Following gene: 29143843

Centisome position: 76.0

GC content: 42.42

Gene sequence:

>330_bases
ATGACTGTTATTTTATTTGGAATAATCAGGGGGTTAATGATGCACGTTACGCTGGTTGAAATTAACGTTCATGATGACAA
GGTTGAACAATTTATCGATGTTTTTCGGCAGAATCATCTGGGCTCAATTAAAGAGCCGGGTAACTTGCGTTTTGATGTTC
TGCAGGATCCGCAGGTGCCTACGCGATTTTATATTTATGAAGCCTACGTTGATGAACAGGCCGTCGCTTTTCACAAGACA
ACGCCACACTATAAAACTTGCGTGGAGCAGCTTGAACCGTTGATGACCGGTCCGCGGACAAAAAAAGTTTTTATGGGTTT
GATGCCTTAA

Upstream 100 bases:

>100_bases
CATCATAACGAAACAGCAGAGCGTGCTTATGAGCTGTTTTTGAGTGAGAAAGGTTAAATGAGATCGCTTCCCCATCTTTT
ACCGATGCGAGGAGATGGGG

Downstream 100 bases:

>100_bases
GGAGCGCTCATGAACAGCCAGTTTGCCGGATTAACGCGCGAAGCATGTGTGGCATTGTTAGCGTCATATCCGCTTAGTGT
GGGTATTCTGGCAGGGCAGT

Product: autoinducer-2 (AI-2) modifying protein LsrG

Products: NA

Alternate protein names: AI-2-degrading protein lsrG [H]

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MTVILFGIIRGLMMHVTLVEINVHDDKVEQFIDVFRQNHLGSIKEPGNLRFDVLQDPQVPTRFYIYEAYVDEQAVAFHKT
TPHYKTCVEQLEPLMTGPRTKKVFMGLMP

Sequences:

>Translated_109_residues
MTVILFGIIRGLMMHVTLVEINVHDDKVEQFIDVFRQNHLGSIKEPGNLRFDVLQDPQVPTRFYIYEAYVDEQAVAFHKT
TPHYKTCVEQLEPLMTGPRTKKVFMGLMP
>Mature_108_residues
TVILFGIIRGLMMHVTLVEINVHDDKVEQFIDVFRQNHLGSIKEPGNLRFDVLQDPQVPTRFYIYEAYVDEQAVAFHKTT
PHYKTCVEQLEPLMTGPRTKKVFMGLMP

Specific function: Involved in the degradation of phospho-AI-2, thereby terminating induction of the lsr operon and closing the AI-2 signaling cycle. Catalyzes the cleavage of phosphorylated 4,5- dihydroxy-2,3-pentanedione (P-DPD) to 2-phosphoglycolic acid (PG) and another

COG id: COG1359

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lsrG family [H]

Homologues:

Organism=Escherichia coli, GI1787797, Length=96, Percent_Identity=80.2083333333333, Blast_Score=169, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007138
- InterPro:   IPR011008 [H]

Pfam domain/function: PF03992 ABM [H]

EC number: NA

Molecular weight: Translated: 12664; Mature: 12533

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVILFGIIRGLMMHVTLVEINVHDDKVEQFIDVFRQNHLGSIKEPGNLRFDVLQDPQVP
CEEEHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC
TRFYIYEAYVDEQAVAFHKTTPHYKTCVEQLEPLMTGPRTKKVFMGLMP
CEEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHEECCCC
>Mature Secondary Structure 
TVILFGIIRGLMMHVTLVEINVHDDKVEQFIDVFRQNHLGSIKEPGNLRFDVLQDPQVP
EEEHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC
TRFYIYEAYVDEQAVAFHKTTPHYKTCVEQLEPLMTGPRTKKVFMGLMP
CEEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA