| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is metL [H]
Identifier: 29143823
GI number: 29143823
Start: 3617767
End: 3620199
Strand: Reverse
Name: metL [H]
Synonym: t3517
Alternate gene names: 29143823
Gene position: 3620199-3617767 (Counterclockwise)
Preceding gene: 29143824
Following gene: 29143821
Centisome position: 75.55
GC content: 59.19
Gene sequence:
>2433_bases ATGAGTGTGATTGCGCAGGCAGGGGCGAAAGGTCGTCAACTGCATAAATTTGGCGGCAGTAGTCTGGCGGATGTGAAGTG TTACCTGCGTGTCGCAGGCATTATGGCGGAGTATTCGCAGCCTGACGATATGATGGTAGTGTCCGCCGCAGGCAGTACCA CCAACCAGTTGATTAGCTGGCTCAAGTTAAGCCAGACCGATCGCCTTTCTGCGCATCAGGTATTACAGACGTTACGCCGC TACCAGTGCGATCTGATTAGCGGGCTGCTTCCCGCCGACGCGGCAGATGACTTAACCAGCGCTTTTATCAGCGATCTGGA ACGTCTTGCCGCCTTGCTCGACGGCGGCGTAACGGATGCCGTCTATGCTGAGATCGTCGGACACGGCGAAATTTGGTCGG CGAGATTGATGTCCGCCGTCCTGAATCAGCAGGGGCTGGATGCCGCCTGGCTGGACGCGCGCGCATTTTTACGCGCCGAA CGCGCCGCACAGCCGCAGGTTGATGAAGGACTATCTTATCCTTTATTGCAACAGCTACTGGCGCAGCATCCTGGCAAACG TCTGGTCGTGACCGGGTTTATCAGCCGCAATCACGACGGCGAAACAGTCCTGTTAGGCCGTAACGGTTCCGACTATTCCG CCACGCAAATCGGCGCGTTGGCGGGCGTTTCCCGCGTGACCATCTGGAGCGATGTCGCGGGCGTTTATAGCGCCGACCCG CGCAAAGTGAAAGATGCCTGCCTGCTGCCGTTGCTGCGTCTGGACGAAGCCAGCGAGCTGGCGCGTCTGGCGGCGCCTGT TCTGCACGCCCGCACGCTACAGCCAGTGTCCGGCAGCGATATCGATTTGCAGTTGCGCTGTAGCTACACGCCGGATCAAG GGTCAACCCGAATTGAACGAGTGCTGGCTTCCGGGACGGGCGCGCGTATCGTGACCAGTCACGATGATATCTGTCTGATT GAGTTTCAGGTGCCCGCCAGCCAGGATTTCAGGCTGGCGCACAAAGAGCTCGACCAAATTTTAAAACGGGCGCAGGCGCG TCCGCTGGCGGTGGGCGTGCATCGCGATCGCCAGCTATTGCAGTTCTGCTATACCGCCGAGGTAGCGGATAGCGTACTGA AACTCCTCGACGATGTCGGACTGCCGGGCGAATTGCGCCTGCGGCAGGGGCTGGCGCTGGTGGCGATGGTCGGTGCGGGC GTCACTCGCAATCCGCTACACTGCCATCGCTTCTGGCAGCAGTTGAAAGGTCAGCCAGTGGAGTTTACCTGGCAGTCGGA GGAGGGCATCAGTCTGGTGGCGGTGCTGCGTACCGGCCCGACTGAGAGCCTGATTCAGGGGCTGCACCAGTCTGTTTTCC GCGCCGAAAAACGCATTGGCCTGATGCTGTTCGGTAAGGGGAACATCGGCTCCCGTTGGCTGGAACTATTTGCCCGTGAA CAAAGCACGCTTTCCGCGCGTACTGGTTTTGAATTTGTGCTGGCGGGCGTGGTGGATAGCCGCCGTAGCCTGTTGAATTA TGAAGGGCTGGACGCCAGCCGCGCGCTGGCATTCTTTGATGATGAAGCCGTTGAGCAGGACGAAGAGTCGCTATTCCTGT GGATGCGTGCGCATCCGTATGATGATTTAGTGGTGCTGGATGTGACAGCAAGCGAGCAACTGGCCGATCAGTACCTTGAT TTCGCCAGCCACGGTTTTCATGTGATTAGCGCCAATAAACTGGCGGGCGCAAGCGCCAGCGATAAGTATCGCCAGATTCA TGACGCGTTTGAAAAAACCGGGCGTTACTGGCTGTATAACGCCACCGTGGGCGCGGGGTTGCCGATCAACCACACGGTGC GGGATCTGATTGACAGCGGCGATACGATTCTCTCGATCAGCGGGATCTTCTCCGGGACGCTATCCTGGCTGTTCCTGCAA TTTGACGGCACGGTGCCGTTTACCGATCTGGTGGATCAGGCCTGGCAGCAGGGGCTGACGGAACCCGATCCGCGCGTCGA TCTTTCCGGAAAAGATGTCATGCGTAAGCTGGTGATTCTGGCGCGCGAGGCGGGATACGACATCGAGCCGGATCAGGTGC GTGTAGAATCGTTGGTGCCGGCGCACTGTGAAGAAGGGTCTATCGATCACTTTTTCGAAAACGGCGACGCGCTGAATGAA CAGATGGTGCAGCGTCTGGAGGCAGCCCGCGAACTGGGGCTGGTGTTGCGTTACGTGGCGCGTTTCGACGCCAATGGCAA AGCGCGCGTCGGCGTTGAAGCGGTGCGTCCGGAGCATCCGCTGGCGGCGCTGCTGCCGTGCGATAATGTCTTTGCTATTG AAAGCCGCTGGTATCGCGATAACCCGCTGGTGATCCGTGGGCCGGGCGCGGGTCGCGATGTGACCGCCGGGGCGATTCAG TCGGATATCAACCGCCTGGCGCAGCTATTGTAA
Upstream 100 bases:
>100_bases TCTCCGAAACGCTACTGCGTATCTCCACCGGTATTGAAGATGGCGAAGATTTAATTGCCGACCTGGAAAATGGCTTCCGG GCTGCAAACAAGGGGTAAAC
Downstream 100 bases:
>100_bases TACGCCCGCCTGCCGGATAGCGGCTTCGCCAGATCCGGCAGCGGGCAAACCGGGGTATCTGTTTATTCTTCGTCAGATGC GTTTTCTGCATTGGCGACGA
Product: bifunctional aspartate kinase II/homoserine dehydrogenase II
Products: NA
Alternate protein names: Aspartokinase II/homoserine dehydrogenase II; AKII-HDII; Aspartokinase; Homoserine dehydrogenase [H]
Number of amino acids: Translated: 810; Mature: 809
Protein sequence:
>810_residues MSVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMAEYSQPDDMMVVSAAGSTTNQLISWLKLSQTDRLSAHQVLQTLRR YQCDLISGLLPADAADDLTSAFISDLERLAALLDGGVTDAVYAEIVGHGEIWSARLMSAVLNQQGLDAAWLDARAFLRAE RAAQPQVDEGLSYPLLQQLLAQHPGKRLVVTGFISRNHDGETVLLGRNGSDYSATQIGALAGVSRVTIWSDVAGVYSADP RKVKDACLLPLLRLDEASELARLAAPVLHARTLQPVSGSDIDLQLRCSYTPDQGSTRIERVLASGTGARIVTSHDDICLI EFQVPASQDFRLAHKELDQILKRAQARPLAVGVHRDRQLLQFCYTAEVADSVLKLLDDVGLPGELRLRQGLALVAMVGAG VTRNPLHCHRFWQQLKGQPVEFTWQSEEGISLVAVLRTGPTESLIQGLHQSVFRAEKRIGLMLFGKGNIGSRWLELFARE QSTLSARTGFEFVLAGVVDSRRSLLNYEGLDASRALAFFDDEAVEQDEESLFLWMRAHPYDDLVVLDVTASEQLADQYLD FASHGFHVISANKLAGASASDKYRQIHDAFEKTGRYWLYNATVGAGLPINHTVRDLIDSGDTILSISGIFSGTLSWLFLQ FDGTVPFTDLVDQAWQQGLTEPDPRVDLSGKDVMRKLVILAREAGYDIEPDQVRVESLVPAHCEEGSIDHFFENGDALNE QMVQRLEAARELGLVLRYVARFDANGKARVGVEAVRPEHPLAALLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGAIQ SDINRLAQLL
Sequences:
>Translated_810_residues MSVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMAEYSQPDDMMVVSAAGSTTNQLISWLKLSQTDRLSAHQVLQTLRR YQCDLISGLLPADAADDLTSAFISDLERLAALLDGGVTDAVYAEIVGHGEIWSARLMSAVLNQQGLDAAWLDARAFLRAE RAAQPQVDEGLSYPLLQQLLAQHPGKRLVVTGFISRNHDGETVLLGRNGSDYSATQIGALAGVSRVTIWSDVAGVYSADP RKVKDACLLPLLRLDEASELARLAAPVLHARTLQPVSGSDIDLQLRCSYTPDQGSTRIERVLASGTGARIVTSHDDICLI EFQVPASQDFRLAHKELDQILKRAQARPLAVGVHRDRQLLQFCYTAEVADSVLKLLDDVGLPGELRLRQGLALVAMVGAG VTRNPLHCHRFWQQLKGQPVEFTWQSEEGISLVAVLRTGPTESLIQGLHQSVFRAEKRIGLMLFGKGNIGSRWLELFARE QSTLSARTGFEFVLAGVVDSRRSLLNYEGLDASRALAFFDDEAVEQDEESLFLWMRAHPYDDLVVLDVTASEQLADQYLD FASHGFHVISANKLAGASASDKYRQIHDAFEKTGRYWLYNATVGAGLPINHTVRDLIDSGDTILSISGIFSGTLSWLFLQ FDGTVPFTDLVDQAWQQGLTEPDPRVDLSGKDVMRKLVILAREAGYDIEPDQVRVESLVPAHCEEGSIDHFFENGDALNE QMVQRLEAARELGLVLRYVARFDANGKARVGVEAVRPEHPLAALLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGAIQ SDINRLAQLL >Mature_809_residues SVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMAEYSQPDDMMVVSAAGSTTNQLISWLKLSQTDRLSAHQVLQTLRRY QCDLISGLLPADAADDLTSAFISDLERLAALLDGGVTDAVYAEIVGHGEIWSARLMSAVLNQQGLDAAWLDARAFLRAER AAQPQVDEGLSYPLLQQLLAQHPGKRLVVTGFISRNHDGETVLLGRNGSDYSATQIGALAGVSRVTIWSDVAGVYSADPR KVKDACLLPLLRLDEASELARLAAPVLHARTLQPVSGSDIDLQLRCSYTPDQGSTRIERVLASGTGARIVTSHDDICLIE FQVPASQDFRLAHKELDQILKRAQARPLAVGVHRDRQLLQFCYTAEVADSVLKLLDDVGLPGELRLRQGLALVAMVGAGV TRNPLHCHRFWQQLKGQPVEFTWQSEEGISLVAVLRTGPTESLIQGLHQSVFRAEKRIGLMLFGKGNIGSRWLELFAREQ STLSARTGFEFVLAGVVDSRRSLLNYEGLDASRALAFFDDEAVEQDEESLFLWMRAHPYDDLVVLDVTASEQLADQYLDF ASHGFHVISANKLAGASASDKYRQIHDAFEKTGRYWLYNATVGAGLPINHTVRDLIDSGDTILSISGIFSGTLSWLFLQF DGTVPFTDLVDQAWQQGLTEPDPRVDLSGKDVMRKLVILAREAGYDIEPDQVRVESLVPAHCEEGSIDHFFENGDALNEQ MVQRLEAARELGLVLRYVARFDANGKARVGVEAVRPEHPLAALLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGAIQS DINRLAQLL
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the homoserine dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1790376, Length=810, Percent_Identity=94.0740740740741, Blast_Score=1560, Evalue=0.0, Organism=Escherichia coli, GI1786183, Length=828, Percent_Identity=30.7971014492754, Blast_Score=327, Evalue=2e-90, Organism=Escherichia coli, GI1790455, Length=288, Percent_Identity=31.25, Blast_Score=117, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6322599, Length=370, Percent_Identity=34.3243243243243, Blast_Score=163, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6320893, Length=474, Percent_Identity=23.8396624472574, Blast_Score=84, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR005106 - InterPro: IPR001341 - InterPro: IPR018042 - InterPro: IPR011147 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 [H]
Pfam domain/function: PF00696 AA_kinase; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]
EC number: =2.7.2.4; =1.1.1.3 [H]
Molecular weight: Translated: 88876; Mature: 88745
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS01042 HOMOSER_DHGENASE ; PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMAEYSQPDDMMVVSAAGSTTNQLISW CCCCHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHH LKLSQTDRLSAHQVLQTLRRYQCDLISGLLPADAADDLTSAFISDLERLAALLDGGVTDA HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH VYAEIVGHGEIWSARLMSAVLNQQGLDAAWLDARAFLRAERAAQPQVDEGLSYPLLQQLL HHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHH AQHPGKRLVVTGFISRNHDGETVLLGRNGSDYSATQIGALAGVSRVTIWSDVAGVYSADP HHCCCCEEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEHHHHHHHHCCCCC RKVKDACLLPLLRLDEASELARLAAPVLHARTLQPVSGSDIDLQLRCSYTPDQGSTRIER HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHH VLASGTGARIVTSHDDICLIEFQVPASQDFRLAHKELDQILKRAQARPLAVGVHRDRQLL HHHCCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHH QFCYTAEVADSVLKLLDDVGLPGELRLRQGLALVAMVGAGVTRNPLHCHRFWQQLKGQPV HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCE EFTWQSEEGISLVAVLRTGPTESLIQGLHQSVFRAEKRIGLMLFGKGNIGSRWLELFARE EEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH QSTLSARTGFEFVLAGVVDSRRSLLNYEGLDASRALAFFDDEAVEQDEESLFLWMRAHPY HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCHHHCCCCCCEEEEEECCCC DDLVVLDVTASEQLADQYLDFASHGFHVISANKLAGASASDKYRQIHDAFEKTGRYWLYN CCEEEEEECCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEE ATVGAGLPINHTVRDLIDSGDTILSISGIFSGTLSWLFLQFDGTVPFTDLVDQAWQQGLT ECCCCCCCCHHHHHHHHCCCCCEEEEHHHHHHCEEEEEEEECCCCCHHHHHHHHHHCCCC EPDPRVDLSGKDVMRKLVILAREAGYDIEPDQVRVESLVPAHCEEGSIDHFFENGDALNE CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHEEHHHHCCCCCCCCCCHHHHCCCCHHHH QMVQRLEAARELGLVLRYVARFDANGKARVGVEAVRPEHPLAALLPCDNVFAIESRWYRD HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECEEECCCCCCCEEEECCCCEEEECCCEECC NPLVIRGPGAGRDVTAGAIQSDINRLAQLL CCEEEECCCCCCCCHHHHHHHHHHHHHHHC >Mature Secondary Structure SVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMAEYSQPDDMMVVSAAGSTTNQLISW CCCHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHH LKLSQTDRLSAHQVLQTLRRYQCDLISGLLPADAADDLTSAFISDLERLAALLDGGVTDA HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH VYAEIVGHGEIWSARLMSAVLNQQGLDAAWLDARAFLRAERAAQPQVDEGLSYPLLQQLL HHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHH AQHPGKRLVVTGFISRNHDGETVLLGRNGSDYSATQIGALAGVSRVTIWSDVAGVYSADP HHCCCCEEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEHHHHHHHHCCCCC RKVKDACLLPLLRLDEASELARLAAPVLHARTLQPVSGSDIDLQLRCSYTPDQGSTRIER HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHH VLASGTGARIVTSHDDICLIEFQVPASQDFRLAHKELDQILKRAQARPLAVGVHRDRQLL HHHCCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHH QFCYTAEVADSVLKLLDDVGLPGELRLRQGLALVAMVGAGVTRNPLHCHRFWQQLKGQPV HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCE EFTWQSEEGISLVAVLRTGPTESLIQGLHQSVFRAEKRIGLMLFGKGNIGSRWLELFARE EEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH QSTLSARTGFEFVLAGVVDSRRSLLNYEGLDASRALAFFDDEAVEQDEESLFLWMRAHPY HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCHHHCCCCCCEEEEEECCCC DDLVVLDVTASEQLADQYLDFASHGFHVISANKLAGASASDKYRQIHDAFEKTGRYWLYN CCEEEEEECCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEE ATVGAGLPINHTVRDLIDSGDTILSISGIFSGTLSWLFLQFDGTVPFTDLVDQAWQQGLT ECCCCCCCCHHHHHHHHCCCCCEEEEHHHHHHCEEEEEEEECCCCCHHHHHHHHHHCCCC EPDPRVDLSGKDVMRKLVILAREAGYDIEPDQVRVESLVPAHCEEGSIDHFFENGDALNE CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHEEHHHHCCCCCCCCCCHHHHCCCCHHHH QMVQRLEAARELGLVLRYVARFDANGKARVGVEAVRPEHPLAALLPCDNVFAIESRWYRD HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECEEECCCCCCCEEEECCCCEEEECCCEECC NPLVIRGPGAGRDVTAGAIQSDINRLAQLL CCEEEECCCCCCCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6298218; 8346018; 9278503 [H]