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The map label for this gene is ygiQ [H]

Identifier: 29143430

GI number: 29143430

Start: 3169697

End: 3171868

Strand: Reverse

Name: ygiQ [H]

Synonym: t3088

Alternate gene names: 29143430

Gene position: 3171868-3169697 (Counterclockwise)

Preceding gene: 29143431

Following gene: 29143426

Centisome position: 66.19

GC content: 57.09

Gene sequence:

>2172_bases
ATGAGCGCTATCTCCCTGATCCAACCGGATCGCGACCTTTTCTCCTGGCCGCAGTACTGGGCCGCCTGTTTTGGGCCGGC
GCCGTTTTTGCCGATGTCACGTGAAGAGATGGATCAACTTGGCTGGGATAGCTGCGACATCATTCTGGTGACGGGCGACG
CGTATGTCGATCATCCGAGCTTCGGCATGGCGATTTGCGGCCGTATGCTGGAAGCGCAGGGCTTCCGCGTGGGGATCATC
GCCCAGCCGGACTGGAACAGCAAAGACGACTTTATGCGTCTGGGTAAACCGAACCTGTTCTTCGGCGTCACCGCTGGCAA
CATGGACTCGATGATCAACCGTTACACCGCTGACCGTAAGCTGCGCCACGATGACGCCTACACCCCGGATAACGTCGCGG
GCAAACGCCCGGACCGCGCCACGCTGGTCTATACCCAGCGTTGCAAAGAAGCGTGGAAAGATGTCCCGGTGATCCTTGGC
GGCATTGAGGCCAGTCTGCGCCGTACCGCGCATTACGACTACTGGTCTGATACTGTGCGTCGTTCAGTGTTAGTCGATTC
CAAAGCCGACATGCTGATGTTTGGCAACGGTGAGCGTCCGCTGGTGGAAGTGGCGCACCGTCTGGCAATGGGCGAAACCA
TCGATCAGATTCGCGACGTGCGTAACACTGCGATTATGGTTAAAGAAGCGCTGCCAGGCTGGAGCGGCGTCGACTCCACT
CGTCTGGACACGCCGGGTAAAATCGATCCAATTCCCCATCCCTATGGCGAGGATCTGCCGTGCGCGGATAACAAGCCGGT
CGCGCCGAAAAAGCAAGAAGCTAAGGCGATTACCGTGCAGCCGCCGCGTCCGAAGCCGTGGGAAAAAACCTATATCCTGT
TGCCATCCTTTGAAAAGGTGAAAGGCGACAAGGTGCTGTACGCCCATGCGTCGCGTATTCTGCATCACGAAACTAACCCT
GGCTGCGCGCGGGCGTTGATGCAAAAACACGGCGACCGCTATGTCTGGATCAACCCGCCCGCCATACCGCTCTCCACTGA
AGAGATGGATAGCGTGTTTGCGCTGCCGTATCAGCGTGTGCCGCACCCGGCTTACGGCAATGCCCGTATTCCGGCCTATG
AGATGATCCGCTTTTCGATCAATATCATGCGCGGCTGCTTTGGCGGCTGCTCTTTCTGCTCGATCACTGAACATGAAGGG
CGCATCATTCAGAGCCGCTCGGAAGACTCTATTATCAACGAGATCGAAGCGATCCGCGACACGGTGCCGGGGTTTACCGG
CGTGATCTCCGATCTGGGCGGTCCTACCGCGAACATGTATATGCTGCGCTGTAAGTCGCCGCGTGCGGAGCAGACCTGTC
GTCGCCTGTCATGCGTCTATCCGGATATCTGTCCGCATATGGATACTGACCATACGCCGACGATCAATCTTTATCGCCGC
GCCCGTGAGCTGAAAGGCATTAAGAAAATCTTAATTGCCTCCGGCGTGCGCTACGACATCGCTGTAGAAGATCCTCGCTA
CATTAAAGAGCTGGCAAGCCATCATGTGGGCGGCTATCTGAAGATTGCGCCGGAGCATACTGAAGAAGGTCCGCTGTCGA
AAATGATGAAGCCGGGTATGGGCAGCTACGATCGCTTTAAAGAGTTATTTGACCTTTACTCTAAACAGGCCGGAAAAGAG
CAGTATCTGATCCCATATTTTATCTCCGCGCATCCGGGCACGCGGGACGAGGATATGGTGAATCTGGCGCTGTGGCTCAA
GCGCCACCGCTTCCGTCTGGATCAGGTGCAGAACTTCTACCCGTCGCCGTTGGCAAATTCGACCACCATGTATTACACCG
GCAAAAACCCGCTGGGTAAAATTGGTTATAAGAGTGAAGATGTGGTGGTGCCGAAGGGAGACAGGCAACGTCGCCTGCAT
AAGGCGCTGCTGCGTTATCACGATCCGGCGAACTGGCCGCTGATTCGCCAGGCGCTGGAAGCGATGGGCAAAAAGCACCT
GATTGGCGGTCGCCGTGAGTGTCTGGTGCCTGCGCCGACTATTGAAGAGATGCGCGAAGCGCGTCGCCAGAACCGCAATA
CCCGCCCGGCGTTGACCAAGCATACGCCGGTGGAACATCAGCGGCAGGGGCTTGCTGCTAATAAGAAGCGCGGGAAAGGC
GCGGGGCGTTAA

Upstream 100 bases:

>100_bases
GCTACAGAGTGCAGCCTCACCAATCAATTCGATTTCTCTTCCATTCCAGCTTATAATCCCCGACCTTTGATTATTTTTTT
GCCAATTTTTTGGAAGCAAT

Downstream 100 bases:

>100_bases
ACGGTTTTACAGGTATCCTGTCAGGCTGGATAAGGCGAAGCCGCGATCCAGCAATTATTTTGCCTGATGGCGCTGCGTTT
ATCAGGCCCACAGATCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 723; Mature: 722

Protein sequence:

>723_residues
MSAISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGII
AQPDWNSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRKLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILG
GIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGETIDQIRDVRNTAIMVKEALPGWSGVDST
RLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAITVQPPRPKPWEKTYILLPSFEKVKGDKVLYAHASRILHHETNP
GCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYQRVPHPAYGNARIPAYEMIRFSINIMRGCFGGCSFCSITEHEG
RIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTDHTPTINLYRR
ARELKGIKKILIASGVRYDIAVEDPRYIKELASHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDLYSKQAGKE
QYLIPYFISAHPGTRDEDMVNLALWLKRHRFRLDQVQNFYPSPLANSTTMYYTGKNPLGKIGYKSEDVVVPKGDRQRRLH
KALLRYHDPANWPLIRQALEAMGKKHLIGGRRECLVPAPTIEEMREARRQNRNTRPALTKHTPVEHQRQGLAANKKRGKG
AGR

Sequences:

>Translated_723_residues
MSAISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGII
AQPDWNSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRKLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILG
GIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGETIDQIRDVRNTAIMVKEALPGWSGVDST
RLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAITVQPPRPKPWEKTYILLPSFEKVKGDKVLYAHASRILHHETNP
GCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYQRVPHPAYGNARIPAYEMIRFSINIMRGCFGGCSFCSITEHEG
RIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTDHTPTINLYRR
ARELKGIKKILIASGVRYDIAVEDPRYIKELASHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDLYSKQAGKE
QYLIPYFISAHPGTRDEDMVNLALWLKRHRFRLDQVQNFYPSPLANSTTMYYTGKNPLGKIGYKSEDVVVPKGDRQRRLH
KALLRYHDPANWPLIRQALEAMGKKHLIGGRRECLVPAPTIEEMREARRQNRNTRPALTKHTPVEHQRQGLAANKKRGKG
AGR
>Mature_722_residues
SAISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIA
QPDWNSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRKLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGG
IEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGETIDQIRDVRNTAIMVKEALPGWSGVDSTR
LDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAITVQPPRPKPWEKTYILLPSFEKVKGDKVLYAHASRILHHETNPG
CARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYQRVPHPAYGNARIPAYEMIRFSINIMRGCFGGCSFCSITEHEGR
IIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTDHTPTINLYRRA
RELKGIKKILIASGVRYDIAVEDPRYIKELASHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDLYSKQAGKEQ
YLIPYFISAHPGTRDEDMVNLALWLKRHRFRLDQVQNFYPSPLANSTTMYYTGKNPLGKIGYKSEDVVVPKGDRQRRLHK
ALLRYHDPANWPLIRQALEAMGKKHLIGGRRECLVPAPTIEEMREARRQNRNTRPALTKHTPVEHQRQGLAANKKRGKGA
GR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=723, Percent_Identity=95.1590594744122, Blast_Score=1449, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 81926; Mature: 81795

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPS
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEEECCCEECCCC
FGMAICGRMLEAQGFRVGIIAQPDWNSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRK
HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
LRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVR
HCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCHHHHHHH
RSVLVDSKADMLMFGNGERPLVEVAHRLAMGETIDQIRDVRNTAIMVKEALPGWSGVDST
HHHEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCCCCCCC
RLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAITVQPPRPKPWEKTYILLPSFEKV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCHHHH
KGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYQRV
CCCEEEEHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCHHHC
PHPAYGNARIPAYEMIRFSINIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHH
TVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTDHTPTINLYRR
HCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
ARELKGIKKILIASGVRYDIAVEDPRYIKELASHHVGGYLKIAPEHTEEGPLSKMMKPGM
HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHCCCC
GSYDRFKELFDLYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKRHRFRLDQVQNFY
CCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PSPLANSTTMYYTGKNPLGKIGYKSEDVVVPKGDRQRRLHKALLRYHDPANWPLIRQALE
CCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
AMGKKHLIGGRRECLVPAPTIEEMREARRQNRNTRPALTKHTPVEHQRQGLAANKKRGKG
HCCCHHCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
AGR
CCC
>Mature Secondary Structure 
SAISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPS
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEEECCCEECCCC
FGMAICGRMLEAQGFRVGIIAQPDWNSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRK
HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
LRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVR
HCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCHHHHHHH
RSVLVDSKADMLMFGNGERPLVEVAHRLAMGETIDQIRDVRNTAIMVKEALPGWSGVDST
HHHEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCCCCCCC
RLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAITVQPPRPKPWEKTYILLPSFEKV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCHHHH
KGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYQRV
CCCEEEEHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCHHHC
PHPAYGNARIPAYEMIRFSINIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHH
TVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTDHTPTINLYRR
HCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
ARELKGIKKILIASGVRYDIAVEDPRYIKELASHHVGGYLKIAPEHTEEGPLSKMMKPGM
HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHCCCC
GSYDRFKELFDLYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKRHRFRLDQVQNFY
CCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PSPLANSTTMYYTGKNPLGKIGYKSEDVVVPKGDRQRRLHKALLRYHDPANWPLIRQALE
CCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
AMGKKHLIGGRRECLVPAPTIEEMREARRQNRNTRPALTKHTPVEHQRQGLAANKKRGKG
HCCCHHCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
AGR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]