Click here to switch to the map view.

The map label for this gene is stbA [H]

Identifier: 29142905

GI number: 29142905

Start: 2596311

End: 2596847

Strand: Direct

Name: stbA [H]

Synonym: t2521

Alternate gene names: 29142905

Gene position: 2596311-2596847 (Clockwise)

Preceding gene: 29142895

Following gene: 29142906

Centisome position: 54.18

GC content: 47.86

Gene sequence:

>537_bases
ATGTCTATGAAAAAATATTTAGCAATGATCACAGGCTCGCTTCTTGTCTCCAGCAGCGCGATGGCTGTTTCTGATAACAC
CATCACCTTTCAAGGGGAAGTCTCTGATGAAACGTGCTCTGTCGTGATTAATGGTAATCAGGCTAAACCCGTCGTGTTAT
TGCCAACAGTAAGTACTAAAGAGTTATCAGAACAAGGGAAAACCGCGGGGCCAATAACGTTTGATATTGGGCTGTCCGGG
TGTACCGGTTCTAAGGACAAAACAACAAAAATTTCCACCGTCTTTGTCGGTAATCAGGTCACCAGTAACGGTAACCTGGG
TAATACTGGCAGCGCGAAAAATGTTGAAGTCCAATTACTCGACACTTCAGGGGAGCCAATCAATCTGACCGGCGGCTTTA
CTGGCGACGGCGACCTACAGCTGGAACCAAATGCTTCTGAAGCGAGCGCGACTTATACCGCGCGGTATTACTCTACCGGG
AAAGCAGAGGCTGGGACAGTCGCTGCCACCCTACAATACGCCGTTTCGTATAAATAA

Upstream 100 bases:

>100_bases
TTAATGATCGTTATTTTTACCACTCCTCCATAAGCACGAAACATTCGGGCGAATTGCACTCGTCCTGAAAAAGTAAAGAT
TAATACAGGAACATTATTAT

Downstream 100 bases:

>100_bases
TTGTCGCTACGGTCTGGCATTGAAACGCCAGACCATTTTCAATCGCCAGGGAGTTGTTGAGATGAAAATGGATACCCGAC
ATTCCGCATTATATTACTTA

Product: fimbrial protein

Products: NA

Alternate protein names: F17 fimbrial adhesive antigen; F17 pilin [H]

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MSMKKYLAMITGSLLVSSSAMAVSDNTITFQGEVSDETCSVVINGNQAKPVVLLPTVSTKELSEQGKTAGPITFDIGLSG
CTGSKDKTTKISTVFVGNQVTSNGNLGNTGSAKNVEVQLLDTSGEPINLTGGFTGDGDLQLEPNASEASATYTARYYSTG
KAEAGTVAATLQYAVSYK

Sequences:

>Translated_178_residues
MSMKKYLAMITGSLLVSSSAMAVSDNTITFQGEVSDETCSVVINGNQAKPVVLLPTVSTKELSEQGKTAGPITFDIGLSG
CTGSKDKTTKISTVFVGNQVTSNGNLGNTGSAKNVEVQLLDTSGEPINLTGGFTGDGDLQLEPNASEASATYTARYYSTG
KAEAGTVAATLQYAVSYK
>Mature_177_residues
SMKKYLAMITGSLLVSSSAMAVSDNTITFQGEVSDETCSVVINGNQAKPVVLLPTVSTKELSEQGKTAGPITFDIGLSGC
TGSKDKTTKISTVFVGNQVTSNGNLGNTGSAKNVEVQLLDTSGEPINLTGGFTGDGDLQLEPNASEASATYTARYYSTGK
AEAGTVAATLQYAVSYK

Specific function: Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18354; Mature: 18222

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMKKYLAMITGSLLVSSSAMAVSDNTITFQGEVSDETCSVVINGNQAKPVVLLPTVSTK
CCHHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCEEEEEEECCCCCCEEEEECCCHH
ELSEQGKTAGPITFDIGLSGCTGSKDKTTKISTVFVGNQVTSNGNLGNTGSAKNVEVQLL
HHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCEEECCCCCCCCCCCCEEEEEEE
DTSGEPINLTGGFTGDGDLQLEPNASEASATYTARYYSTGKAEAGTVAATLQYAVSYK
ECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEECC
>Mature Secondary Structure 
SMKKYLAMITGSLLVSSSAMAVSDNTITFQGEVSDETCSVVINGNQAKPVVLLPTVSTK
CHHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCEEEEEEECCCCCCEEEEECCCHH
ELSEQGKTAGPITFDIGLSGCTGSKDKTTKISTVFVGNQVTSNGNLGNTGSAKNVEVQLL
HHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCEEECCCCCCCCCCCCEEEEEEE
DTSGEPINLTGGFTGDGDLQLEPNASEASATYTARYYSTGKAEAGTVAATLQYAVSYK
ECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2897333 [H]