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The map label for this gene is scsD

Identifier: 29142235

GI number: 29142235

Start: 1867156

End: 1867662

Strand: Reverse

Name: scsD

Synonym: t1804

Alternate gene names: NA

Gene position: 1867662-1867156 (Counterclockwise)

Preceding gene: 29142236

Following gene: 29142234

Centisome position: 38.97

GC content: 62.33

Gene sequence:

>507_bases
ATGGCGGGTAAACTGCGGCGTTGGCTGCGTGAAGCCGCGGTTTTTCTGGCGCTCCTCATCGCGATAATGGTGGTCATGGA
CGTCTGGCGCGCGCCGCAGGCGCCTCCGGCGTTTGCCGCGACACCATTACATACGCTGACGGGAGAGTCGACAACTCTGG
CGACCTTGAGCGAGGAACGCCCCGTACTGCTCTATTTTTGGGCCAGCTGGTGCGGGGTATGCCGCTTTACCACGCCTGCG
GTCGCTCACCTGGCGGCGGAAGGGGAAAACGTCATGACCGTTGCGCTCCGCTCCGGCGGTGATGCTGAGGTTGCCCGCTG
GCTGGCGCGCAAGGGCGTTGACTTCCCGGTCGTCAATGATGCTAACGGCGCCTTATCCGCTGGCTGGGAAATCAGCGTGA
CGCCAACGCTGGTGGTGGTTTCACAAGGTCGGGTTGTGTTCACCACCAGCGGCTGGACCAGCTATTGGGGCATGAAGCTT
CGGCTGTGGTGGGCAAAAACGTTCTGA

Upstream 100 bases:

>100_bases
CAAGGAACGCCAGCGACGATCATTGGCGACGAGCTGATTCCGGGCGCAGTGCCCTGGGATACGCTGGAAGCGGTGGTGAA
AGAAAAACTGGCGGCTGCCA

Downstream 100 bases:

>100_bases
ATATGCGCCGGGGTTTCCCGGCGCTAACGCGTTTACTGTAAGAAAAACCTCCGTTTTGCGAAATCGTTCCCGGAAAAATG
ATCCATTTCTGTCACACTCA

Product: secreted copper-sensitivity suppressor D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MAGKLRRWLREAAVFLALLIAIMVVMDVWRAPQAPPAFAATPLHTLTGESTTLATLSEERPVLLYFWASWCGVCRFTTPA
VAHLAAEGENVMTVALRSGGDAEVARWLARKGVDFPVVNDANGALSAGWEISVTPTLVVVSQGRVVFTTSGWTSYWGMKL
RLWWAKTF

Sequences:

>Translated_168_residues
MAGKLRRWLREAAVFLALLIAIMVVMDVWRAPQAPPAFAATPLHTLTGESTTLATLSEERPVLLYFWASWCGVCRFTTPA
VAHLAAEGENVMTVALRSGGDAEVARWLARKGVDFPVVNDANGALSAGWEISVTPTLVVVSQGRVVFTTSGWTSYWGMKL
RLWWAKTF
>Mature_167_residues
AGKLRRWLREAAVFLALLIAIMVVMDVWRAPQAPPAFAATPLHTLTGESTTLATLSEERPVLLYFWASWCGVCRFTTPAV
AHLAAEGENVMTVALRSGGDAEVARWLARKGVDFPVVNDANGALSAGWEISVTPTLVVVSQGRVVFTTSGWTSYWGMKLR
LWWAKTF

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: NA

Molecular weight: Translated: 18424; Mature: 18292

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGKLRRWLREAAVFLALLIAIMVVMDVWRAPQAPPAFAATPLHTLTGESTTLATLSEER
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCEEEEEECCCC
PVLLYFWASWCGVCRFTTPAVAHLAAEGENVMTVALRSGGDAEVARWLARKGVDFPVVND
CEEEEEEHHHHCHHCCCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCEEEC
ANGALSAGWEISVTPTLVVVSQGRVVFTTSGWTSYWGMKLRLWWAKTF
CCCCEECCEEEEECCEEEEEECCEEEEEECCCCHHCCEEEEEEEEECC
>Mature Secondary Structure 
AGKLRRWLREAAVFLALLIAIMVVMDVWRAPQAPPAFAATPLHTLTGESTTLATLSEER
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCEEEEEECCCC
PVLLYFWASWCGVCRFTTPAVAHLAAEGENVMTVALRSGGDAEVARWLARKGVDFPVVND
CEEEEEEHHHHCHHCCCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCEEEC
ANGALSAGWEISVTPTLVVVSQGRVVFTTSGWTSYWGMKLRLWWAKTF
CCCCEECCEEEEECCEEEEEECCEEEEEECCCCHHCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]