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The map label for this gene is flgF [H]

Identifier: 29142175

GI number: 29142175

Start: 1809113

End: 1809868

Strand: Reverse

Name: flgF [H]

Synonym: t1742

Alternate gene names: 29142175

Gene position: 1809868-1809113 (Counterclockwise)

Preceding gene: 29142176

Following gene: 29142174

Centisome position: 37.77

GC content: 60.98

Gene sequence:

>756_bases
ATGGATCACGCAATTTATACCGCCATGGGGGCGGCCAGCCAGACGCTTAACCAGCAGGCGGTAACGGCCAGCAACCTGGC
TAATGCCTCAACGCCGGGCTTTCGCGCGCAGCTTAACGCGCTACGCGCGGTGCCCGTTGATGGCCTCTCTTTAGCGACGC
GCACGTTGGTTACGGCGTCGACGCCGGGGGCGGATATGACCCAGGGTCAGTTGGACTACACTTCCCGCCCGCTGGATGTT
GCGTTACAGCAGGACGGCTGGCTGGTGGTGCAAGCGGCGGATGGCGCTGAAGGATATACCCGTAACGGGAATATCCAGGT
GGGCCCGACCGGGCAGTTAACCATTCAGGGACATCCGGTTATCGGCGAAGGCGGCCCGATTACCGTTCCGGAAGGGTCGG
AAATCACCATTGCGGCAGACGGCACGATCTCCGCGCTCAATCCCGGCGACCCGCCAAACACGGTGGCGCCCGTTGGGCGG
CTGAAGCTGGTCAAAGCGGAAGGCAATGAGGTGCAGCGGAGCGATGACGGTTTATTCCGCCTTACCGCCGAGGCACAGGC
TGAACGCGGGGCGGTACTGGCCGCCGACCCGTCAATTCGCATTATGTCGGGCGTGCTGGAGGGCAGTAACGTCAAGCCGG
TTGAAGCCATGACCGACATGATCGCCAACGCACGTCGTTTTGAAATGCAGATGAAGGTTATCACCAGCGTAGATGAGAAC
GAAGGGCGAGCTAACCAACTGCTGTCGATGAGTTAA

Upstream 100 bases:

>100_bases
CGCAGCGTAACTACCAGTCGAATGCGCAGACCATCAAAACCCAGGACCAGATCCTCAATACGCTGGTTAACCTGCGCTAA
GCGCCTGACGGGATAGCTTA

Downstream 100 bases:

>100_bases
TACAGGACATTTTATGATCAGTTCATTATGGATCGCCAAAACCGGTCTGGACGCGCAGCAAACCAATATGGATGTGATTG
CCAATAACCTGGCAAACGTC

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVDGLSLATRTLVTASTPGADMTQGQLDYTSRPLDV
ALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQLTIQGHPVIGEGGPITVPEGSEITIAADGTISALNPGDPPNTVAPVGR
LKLVKAEGNEVQRSDDGLFRLTAEAQAERGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSVDEN
EGRANQLLSMS

Sequences:

>Translated_251_residues
MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVDGLSLATRTLVTASTPGADMTQGQLDYTSRPLDV
ALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQLTIQGHPVIGEGGPITVPEGSEITIAADGTISALNPGDPPNTVAPVGR
LKLVKAEGNEVQRSDDGLFRLTAEAQAERGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSVDEN
EGRANQLLSMS
>Mature_251_residues
MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVDGLSLATRTLVTASTPGADMTQGQLDYTSRPLDV
ALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQLTIQGHPVIGEGGPITVPEGSEITIAADGTISALNPGDPPNTVAPVGR
LKLVKAEGNEVQRSDDGLFRLTAEAQAERGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSVDEN
EGRANQLLSMS

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=251, Percent_Identity=86.4541832669323, Blast_Score=441, Evalue=1e-125,
Organism=Escherichia coli, GI1787318, Length=257, Percent_Identity=31.1284046692607, Blast_Score=71, Evalue=6e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 26134; Mature: 26134

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVDGLSLATRTLVTAS
CCCCEEEHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCHHHHEEEEEEEC
TPGADMTQGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQLTIQGHPV
CCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCEEECCCCEEEECCCEE
IGEGGPITVPEGSEITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGLFR
ECCCCCEECCCCCEEEEEECCEEEECCCCCCCCCCCCCCEEEEEEECCCEEECCCCCEEE
LTAEAQAERGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSVDEN
EEECCCCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHCCHHHHEEEEEEECCCCC
EGRANQLLSMS
CCCHHHEEECC
>Mature Secondary Structure
MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVDGLSLATRTLVTAS
CCCCEEEHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCHHHHEEEEEEEC
TPGADMTQGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQLTIQGHPV
CCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCEEECCCCEEEECCCEE
IGEGGPITVPEGSEITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGLFR
ECCCCCEECCCCCEEEEEECCEEEECCCCCCCCCCCCCCEEEEEEECCCEEECCCCCEEE
LTAEAQAERGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSVDEN
EEECCCCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHCCHHHHEEEEEEECCCCC
EGRANQLLSMS
CCCHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2129540; 11677609; 2193164; 2181149 [H]