| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is yceG [H]
Identifier: 29142154
GI number: 29142154
Start: 1787885
End: 1788901
Strand: Reverse
Name: yceG [H]
Synonym: t1721
Alternate gene names: 29142154
Gene position: 1788901-1787885 (Counterclockwise)
Preceding gene: 29142155
Following gene: 29142153
Centisome position: 37.33
GC content: 52.41
Gene sequence:
>1017_bases ATGAAAAAATTGTCAGGCGTTTTCCTTCTGCTGTTGGTTGTGCTGGGTATTGCCACGGGCGTGGGGATGTGGAAAGTTCG CCATCTGGCGAACAGCACGTTACTTATTAAAAACGAGACTATCTTTACGCTCAAGGCGGGAACGGGTCGGCTGGCGCTTG GTGACCAGCTTTATGATGAAAAAATCATTAATCGTCCCCGGGTATTTCAGTGGCTGCTGCGCGTGGAGCCTGAGTTATCG CACTTTAAAGCGGGAACTTACCGTTTTACGCCCGGGATGACCGTACGGGAGATGCTTGAGTTGCTGGAGAGCGGCAAAGA AGCGCAATTCCCGTTGCGGTTTGTGGAAGGGATGCGCCTTAGCGATTACCTGAAACAGTTACGAGAGGCGCCGTATATTC GCCATACATTGCCGGATGATGACTACGCCACTGTCGCTCAGGCATTAAAGCTTGCGCACCCGGAATGGGTAGAAGGGTGG TTCTGGCCTGATACCTGGATGTATACCGCCAACACCAGCGATGTCGCTATTCTCAAGCGAGCGCACCAAAAGATGGTGAA AGCTGTCGATACTGTCTGGAAAGGTCGGGCCGAGGGGCTGCCTTATAAAGATCAGAACCAACTGGTGACAATGGCCTCGA TTATTGAAAAAGAGACGGCTGTCGCCAGCGAACGCGATCAGGTGGCCTCAGTCTTTATTAATCGCCTGAGAATCGGTATG CGCCTTCAGACCGATCCCACCGTGATTTACGGGATGGGGACGAGTTATAATGGTAACTTGTCGCGTGCGGATCTGGAAAA GCCGACGGCTTATAACACGTATACCATAACCGGGCTGCCGCCAGGACCGATTGCATCGCCCAGCGAAGCGTCATTGCAGG CGGCGGCGCATCCGGCGAAAACGCCGTATCTCTATTTTGTGGCCGACGGTAAAGGCGGTCACACATTTAACACCAATCTT GCCAGCCATAATCGGTCAGTGCAGGAGAAAGTGCTTAAGGAAAAAAATGGGCAGTAA
Upstream 100 bases:
>100_bases TAATGCCGATTATTCCCATACGCGCCTATCACGGGACGTCGTATTCTTCGCGAACACTGTTTCAATTTTTAGCCCCATTT TGTGAGCATCCGAATTAGTT
Downstream 100 bases:
>100_bases TTATATCGTCATCGAGGGCCTGGAAGGCGCCGGAAAAACCACTGCGCGCGACGTGGTGGTGGAGACCCTTGAGCAACTGG GTATTCGTAACATGATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MKKLSGVFLLLLVVLGIATGVGMWKVRHLANSTLLIKNETIFTLKAGTGRLALGDQLYDEKIINRPRVFQWLLRVEPELS HFKAGTYRFTPGMTVREMLELLESGKEAQFPLRFVEGMRLSDYLKQLREAPYIRHTLPDDDYATVAQALKLAHPEWVEGW FWPDTWMYTANTSDVAILKRAHQKMVKAVDTVWKGRAEGLPYKDQNQLVTMASIIEKETAVASERDQVASVFINRLRIGM RLQTDPTVIYGMGTSYNGNLSRADLEKPTAYNTYTITGLPPGPIASPSEASLQAAAHPAKTPYLYFVADGKGGHTFNTNL ASHNRSVQEKVLKEKNGQ
Sequences:
>Translated_338_residues MKKLSGVFLLLLVVLGIATGVGMWKVRHLANSTLLIKNETIFTLKAGTGRLALGDQLYDEKIINRPRVFQWLLRVEPELS HFKAGTYRFTPGMTVREMLELLESGKEAQFPLRFVEGMRLSDYLKQLREAPYIRHTLPDDDYATVAQALKLAHPEWVEGW FWPDTWMYTANTSDVAILKRAHQKMVKAVDTVWKGRAEGLPYKDQNQLVTMASIIEKETAVASERDQVASVFINRLRIGM RLQTDPTVIYGMGTSYNGNLSRADLEKPTAYNTYTITGLPPGPIASPSEASLQAAAHPAKTPYLYFVADGKGGHTFNTNL ASHNRSVQEKVLKEKNGQ >Mature_338_residues MKKLSGVFLLLLVVLGIATGVGMWKVRHLANSTLLIKNETIFTLKAGTGRLALGDQLYDEKIINRPRVFQWLLRVEPELS HFKAGTYRFTPGMTVREMLELLESGKEAQFPLRFVEGMRLSDYLKQLREAPYIRHTLPDDDYATVAQALKLAHPEWVEGW FWPDTWMYTANTSDVAILKRAHQKMVKAVDTVWKGRAEGLPYKDQNQLVTMASIIEKETAVASERDQVASVFINRLRIGM RLQTDPTVIYGMGTSYNGNLSRADLEKPTAYNTYTITGLPPGPIASPSEASLQAAAHPAKTPYLYFVADGKGGHTFNTNL ASHNRSVQEKVLKEKNGQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=340, Percent_Identity=85.2941176470588, Blast_Score=590, Evalue=1e-170,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 37940; Mature: 37940
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSGVFLLLLVVLGIATGVGMWKVRHLANSTLLIKNETIFTLKAGTGRLALGDQLYDE CCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCEEEEEECCCCCEEECHHHHHH KIINRPRVFQWLLRVEPELSHFKAGTYRFTPGMTVREMLELLESGKEAQFPLRFVEGMRL HHHCCHHHHHHHHHCCCCHHHHCCCCEEECCCCCHHHHHHHHHCCCCCCCCHHHHCCCCH SDYLKQLREAPYIRHTLPDDDYATVAQALKLAHPEWVEGWFWPDTWMYTANTSDVAILKR HHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCEEEECCCCHHHHHHH AHQKMVKAVDTVWKGRAEGLPYKDQNQLVTMASIIEKETAVASERDQVASVFINRLRIGM HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE RLQTDPTVIYGMGTSYNGNLSRADLEKPTAYNTYTITGLPPGPIASPSEASLQAAAHPAK EEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCC TPYLYFVADGKGGHTFNTNLASHNRSVQEKVLKEKNGQ CCEEEEEEECCCCCEEECCHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure MKKLSGVFLLLLVVLGIATGVGMWKVRHLANSTLLIKNETIFTLKAGTGRLALGDQLYDE CCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCEEEEEECCCCCEEECHHHHHH KIINRPRVFQWLLRVEPELSHFKAGTYRFTPGMTVREMLELLESGKEAQFPLRFVEGMRL HHHCCHHHHHHHHHCCCCHHHHCCCCEEECCCCCHHHHHHHHHCCCCCCCCHHHHCCCCH SDYLKQLREAPYIRHTLPDDDYATVAQALKLAHPEWVEGWFWPDTWMYTANTSDVAILKR HHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCEEEECCCCHHHHHHH AHQKMVKAVDTVWKGRAEGLPYKDQNQLVTMASIIEKETAVASERDQVASVFINRLRIGM HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE RLQTDPTVIYGMGTSYNGNLSRADLEKPTAYNTYTITGLPPGPIASPSEASLQAAAHPAK EEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCC TPYLYFVADGKGGHTFNTNLASHNRSVQEKVLKEKNGQ CCEEEEEEECCCCCEEECCHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 1644759; 8631667 [H]