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The map label for this gene is ycfL [H]

Identifier: 29142148

GI number: 29142148

Start: 1780379

End: 1780753

Strand: Reverse

Name: ycfL [H]

Synonym: t1714

Alternate gene names: 29142148

Gene position: 1780753-1780379 (Counterclockwise)

Preceding gene: 29142149

Following gene: 29142147

Centisome position: 37.16

GC content: 57.07

Gene sequence:

>375_bases
ATGATCAAAGGATGCATCGCGGTTTCTCTGGGCTTGCTGCTGCTTACCGGCTGCCGGTCACATCCTGAAATTCCGGTAAG
CGACGCGCAGTCGCTGGTGATGGAGTCCGCGGTTCTGGCGGCGGGTGTCACCGCAGAGCCGCCTGAACTGACGGCGTCTG
ATATCCAGCCATCAGCTTCTTCCCGCGTCTATAACGAAAGGCAAGAGCCCATAACCGTTCATTATCGGTTTTACTGGTAT
GACGCGCGGGGGCTGGAGATGCATCCGCTGGAGGCGCCGCGTAGCGTAACCATACCCGCGCGTTCGTCGGTAACGCTATT
TGGCAGCGCCAATTATCTGGGGGCGCATAAGGTCAGGCTTTATCTTTATTTGTGA

Upstream 100 bases:

>100_bases
ATACCAACCGTCATGGGGGCCAGGAGGTTTATCATATCCATATGCACCTACTGGGCGGCCGCCCGCTAGGCCCGATGCTG
GCGCATAAAGGCTTGTAAGT

Downstream 100 bases:

>100_bases
GGAGTGAATTTTGATGACAAAAATGCATCGCTACGCCGCCATTGCTGCGCTGGCGATATTTCTCTCCGGGTGTATGGCGC
AACGTCAACCTGCGCCAGTT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MIKGCIAVSLGLLLLTGCRSHPEIPVSDAQSLVMESAVLAAGVTAEPPELTASDIQPSASSRVYNERQEPITVHYRFYWY
DARGLEMHPLEAPRSVTIPARSSVTLFGSANYLGAHKVRLYLYL

Sequences:

>Translated_124_residues
MIKGCIAVSLGLLLLTGCRSHPEIPVSDAQSLVMESAVLAAGVTAEPPELTASDIQPSASSRVYNERQEPITVHYRFYWY
DARGLEMHPLEAPRSVTIPARSSVTLFGSANYLGAHKVRLYLYL
>Mature_124_residues
MIKGCIAVSLGLLLLTGCRSHPEIPVSDAQSLVMESAVLAAGVTAEPPELTASDIQPSASSRVYNERQEPITVHYRFYWY
DARGLEMHPLEAPRSVTIPARSSVTLFGSANYLGAHKVRLYLYL

Specific function: Unknown

COG id: COG5633

COG function: function code R; Predicted periplasmic lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787347, Length=125, Percent_Identity=77.6, Blast_Score=196, Evalue=5e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010824 [H]

Pfam domain/function: PF07233 DUF1425 [H]

EC number: NA

Molecular weight: Translated: 13590; Mature: 13590

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKGCIAVSLGLLLLTGCRSHPEIPVSDAQSLVMESAVLAAGVTAEPPELTASDIQPSAS
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
SRVYNERQEPITVHYRFYWYDARGLEMHPLEAPRSVTIPARSSVTLFGSANYLGAHKVRL
CCCCCCCCCCEEEEEEEEEEECCCCEECCCCCCCEEEECCCCCEEEEECCCCCCCEEEEE
YLYL
EEEC
>Mature Secondary Structure
MIKGCIAVSLGLLLLTGCRSHPEIPVSDAQSLVMESAVLAAGVTAEPPELTASDIQPSAS
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
SRVYNERQEPITVHYRFYWYDARGLEMHPLEAPRSVTIPARSSVTLFGSANYLGAHKVRL
CCCCCCCCCCEEEEEEEEEEECCCCEECCCCCCCEEEECCCCCEEEEECCCCCCCEEEEE
YLYL
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]