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The map label for this gene is ydiV [H]

Identifier: 29142047

GI number: 29142047

Start: 1664447

End: 1665154

Strand: Reverse

Name: ydiV [H]

Synonym: t1611

Alternate gene names: 29142047

Gene position: 1665154-1664447 (Counterclockwise)

Preceding gene: 29142048

Following gene: 29142041

Centisome position: 34.75

GC content: 49.29

Gene sequence:

>708_bases
ATGCGCTATTTTTTTATGGCAGAGCCGATAAGGGCAATGGAGGGGGATTTACTGGGTGTCGAAATCACTACCCATTTTGC
ATCGTCGCCCGCTCGTCCGCTACACCCTGAGTTTGTTATCTCGTCATGGGACAATTCGCAGAAGCGCCGTTTTCTGCTTG
ATCTGTTGCGGACAATCGCGGCCAAACATGGCTGGTTTCTACGCCACGGCCTGTTCTGTATCGTAAATATCGATCGGGGT
ATGGCGCAGCTTGTCCTTCAGGACAAAGATATTCGCGCATTACTACACGCCATGCTATTTGTGGAGTTGCAGGTCGCTGA
ACATTTTTCATGTCAAGATAACGCCTTAATCGATCCTTTAATACACGCGCTTCATAAGCAACCTAATCCATTATGGCTGG
GCGACCTGGGCGTAGGGAACGCAACCGCTGCGCCATTAGTTTGCGGGTGTTTTAGCGGCGTAAAACTTGATCGCAGCTTT
TTTATCTCACAAATTGAAAAAATGACGTTTCCGCTGCTTGTCAAACATATCCGGCGTTATTGTGACAAGATCGTGGTGGG
TGGCCAGGAAAACACACGCTATTTGCCGGCGTTAAAAACGGCAGGCATTTGGGCAACCCAGGGCACGTTATTTCCTTCCG
TTGCGTTAGAAGAGGTTGAAACATTGCTGTTGGGCCGTCGCGTGAACACCCTCAGAGAATCGAACTGA

Upstream 100 bases:

>100_bases
ATTGTTTTTTTCGATCATTTTTTAGATATTGATCGTTTTTACTGATTGATTTGCGTTAAAAGCGCATTATCAGGGAGTTA
AGATCAAGTGGAGTGGTCAC

Downstream 100 bases:

>100_bases
GGGTATTTGTGTCGCTTAGCGATCCTTTCGCCATGCGTCAGCGGTCAGCGCCTCGCCAAAATGGCCTGCGATTAAACGGC
GGGTAAGCTCATGTAGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MRYFFMAEPIRAMEGDLLGVEITTHFASSPARPLHPEFVISSWDNSQKRRFLLDLLRTIAAKHGWFLRHGLFCIVNIDRG
MAQLVLQDKDIRALLHAMLFVELQVAEHFSCQDNALIDPLIHALHKQPNPLWLGDLGVGNATAAPLVCGCFSGVKLDRSF
FISQIEKMTFPLLVKHIRRYCDKIVVGGQENTRYLPALKTAGIWATQGTLFPSVALEEVETLLLGRRVNTLRESN

Sequences:

>Translated_235_residues
MRYFFMAEPIRAMEGDLLGVEITTHFASSPARPLHPEFVISSWDNSQKRRFLLDLLRTIAAKHGWFLRHGLFCIVNIDRG
MAQLVLQDKDIRALLHAMLFVELQVAEHFSCQDNALIDPLIHALHKQPNPLWLGDLGVGNATAAPLVCGCFSGVKLDRSF
FISQIEKMTFPLLVKHIRRYCDKIVVGGQENTRYLPALKTAGIWATQGTLFPSVALEEVETLLLGRRVNTLRESN
>Mature_235_residues
MRYFFMAEPIRAMEGDLLGVEITTHFASSPARPLHPEFVISSWDNSQKRRFLLDLLRTIAAKHGWFLRHGLFCIVNIDRG
MAQLVLQDKDIRALLHAMLFVELQVAEHFSCQDNALIDPLIHALHKQPNPLWLGDLGVGNATAAPLVCGCFSGVKLDRSF
FISQIEKMTFPLLVKHIRRYCDKIVVGGQENTRYLPALKTAGIWATQGTLFPSVALEEVETLLLGRRVNTLRESN

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI1788000, Length=220, Percent_Identity=29.0909090909091, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI87082280, Length=210, Percent_Identity=23.3333333333333, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 26534; Mature: 26534

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYFFMAEPIRAMEGDLLGVEITTHFASSPARPLHPEFVISSWDNSQKRRFLLDLLRTIA
CCEEEECCCHHHHCCCEEEEEEEEHHCCCCCCCCCHHHEEECCCCHHHHHHHHHHHHHHH
AKHGWFLRHGLFCIVNIDRGMAQLVLQDKDIRALLHAMLFVELQVAEHFSCQDNALIDPL
HHCCHHHHCCEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
IHALHKQPNPLWLGDLGVGNATAAPLVCGCFSGVKLDRSFFISQIEKMTFPLLVKHIRRY
HHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
CDKIVVGGQENTRYLPALKTAGIWATQGTLFPSVALEEVETLLLGRRVNTLRESN
HHHEEECCCCCCEECCCHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRYFFMAEPIRAMEGDLLGVEITTHFASSPARPLHPEFVISSWDNSQKRRFLLDLLRTIA
CCEEEECCCHHHHCCCEEEEEEEEHHCCCCCCCCCHHHEEECCCCHHHHHHHHHHHHHHH
AKHGWFLRHGLFCIVNIDRGMAQLVLQDKDIRALLHAMLFVELQVAEHFSCQDNALIDPL
HHCCHHHHCCEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
IHALHKQPNPLWLGDLGVGNATAAPLVCGCFSGVKLDRSFFISQIEKMTFPLLVKHIRRY
HHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
CDKIVVGGQENTRYLPALKTAGIWATQGTLFPSVALEEVETLLLGRRVNTLRESN
HHHEEECCCCCCEECCCHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]