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The map label for this gene is ydcF [H]

Identifier: 29141985

GI number: 29141985

Start: 1597958

End: 1598758

Strand: Reverse

Name: ydcF [H]

Synonym: t1543

Alternate gene names: 29141985

Gene position: 1598758-1597958 (Counterclockwise)

Preceding gene: 161486800

Following gene: 29141984

Centisome position: 33.36

GC content: 54.81

Gene sequence:

>801_bases
ATGAATACAACGCCATTTCCGGCGCTCTCTGCGGAAACATTGCTGGCGGTGAATACCGTCGGACAGTGGCTGGCGCAAAA
TGATTTTTCCGGCGAACAACCTTATTCGTCGGATTGCGTCGTCCTGGCGGGCAATGCGGTGATCCCCACTATCGACGCGG
CCTGTCGCATCGCCAAAGCGCAAGGCGTTCCTTTACTGATTAGCGGCGGTATAGGTCATTCGACGCCGTTTTTGTACGCC
GTGATTGCCCGGCATCCGCGCTACCATACTATTCGCACAACCGGACGCGCTGAAGCCGCTATCCTCGCGGATATCGCGAA
CCAGTTCTGGCATATTCCGGCTGAGAAAATTTGGCTGGAAGATCGGTCAACTAATTGCGGCGAAAATGCCCGTTTCTCCT
GCGCACTGATCCGTCAGGCGAAAGAAAACATTAACACGGCTATCGTTGTGCAAGACCCCACCATGCAGCGGCGCACTATC
GCGGCGTTTCGGCGCGTGACAAACGACGACACCGATGCGCCGCGCTGGCTGAGTTTTCCTGGTTTTGTTCCGGTACTGCG
CCACCTTAACGGCGGTACACGTTTTGCCAACGTTGAAGAGGGCATCTGGACGGTGGAGCGTTATCTGTCTCTGATTGCCG
GCGAGCTGCCACGTTTGCGTGACGATGAAACAGGGTATGGACCGCGTGGTAAAGATTTTATCATTCACGTTGATATCCCA
CGCGATATTGAAAAGGCATGGCAGGTATTGCAGGCAGATACGACGCTGCGCAGTGCGTTAGAACAGAGAGCTTTACGCTA
A

Upstream 100 bases:

>100_bases
GCGTATTTTACAGGCCATGGATCAGATTACGGCCTAAAAAGCCAGGCGACGATATCTTTCAAAGAGATCCGGTACAAGTT
CGGAACAAAAAGGAGGAATT

Downstream 100 bases:

>100_bases
AAATCGCCCGTTTGCGAGGGTGAACGGGCAAGTGCGACCACCATTTCATAAATTTGATGAATTATTTATAAAAGCTGGTT
ATGTTGTCGCTTTACGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MNTTPFPALSAETLLAVNTVGQWLAQNDFSGEQPYSSDCVVLAGNAVIPTIDAACRIAKAQGVPLLISGGIGHSTPFLYA
VIARHPRYHTIRTTGRAEAAILADIANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTI
AAFRRVTNDDTDAPRWLSFPGFVPVLRHLNGGTRFANVEEGIWTVERYLSLIAGELPRLRDDETGYGPRGKDFIIHVDIP
RDIEKAWQVLQADTTLRSALEQRALR

Sequences:

>Translated_266_residues
MNTTPFPALSAETLLAVNTVGQWLAQNDFSGEQPYSSDCVVLAGNAVIPTIDAACRIAKAQGVPLLISGGIGHSTPFLYA
VIARHPRYHTIRTTGRAEAAILADIANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTI
AAFRRVTNDDTDAPRWLSFPGFVPVLRHLNGGTRFANVEEGIWTVERYLSLIAGELPRLRDDETGYGPRGKDFIIHVDIP
RDIEKAWQVLQADTTLRSALEQRALR
>Mature_266_residues
MNTTPFPALSAETLLAVNTVGQWLAQNDFSGEQPYSSDCVVLAGNAVIPTIDAACRIAKAQGVPLLISGGIGHSTPFLYA
VIARHPRYHTIRTTGRAEAAILADIANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTI
AAFRRVTNDDTDAPRWLSFPGFVPVLRHLNGGTRFANVEEGIWTVERYLSLIAGELPRLRDDETGYGPRGKDFIIHVDIP
RDIEKAWQVLQADTTLRSALEQRALR

Specific function: Binds S-adenosyl-L-methionine (AdoMet) [H]

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To S.coelicolor SCO4629 [H]

Homologues:

Organism=Escherichia coli, GI1787683, Length=266, Percent_Identity=69.1729323308271, Blast_Score=396, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 29529; Mature: 29529

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTPFPALSAETLLAVNTVGQWLAQNDFSGEQPYSSDCVVLAGNAVIPTIDAACRIAKA
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEECCCHHHHHHHHHC
QGVPLLISGGIGHSTPFLYAVIARHPRYHTIRTTGRAEAAILADIANQFWHIPAEKIWLE
CCCCEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHEEEE
DRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRRVTNDDTDAPRWLSFP
CCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEECCC
GFVPVLRHLNGGTRFANVEEGIWTVERYLSLIAGELPRLRDDETGYGPRGKDFIIHVDIP
CHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECC
RDIEKAWQVLQADTTLRSALEQRALR
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTTPFPALSAETLLAVNTVGQWLAQNDFSGEQPYSSDCVVLAGNAVIPTIDAACRIAKA
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEECCCHHHHHHHHHC
QGVPLLISGGIGHSTPFLYAVIARHPRYHTIRTTGRAEAAILADIANQFWHIPAEKIWLE
CCCCEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHEEEE
DRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRRVTNDDTDAPRWLSFP
CCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEECCC
GFVPVLRHLNGGTRFANVEEGIWTVERYLSLIAGELPRLRDDETGYGPRGKDFIIHVDIP
CHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECC
RDIEKAWQVLQADTTLRSALEQRALR
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 10493123 [H]