| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is steA [H]
Identifier: 29141937
GI number: 29141937
Start: 1545133
End: 1545765
Strand: Reverse
Name: steA [H]
Synonym: t1493
Alternate gene names: 29141937
Gene position: 1545765-1545133 (Counterclockwise)
Preceding gene: 29141939
Following gene: 29141936
Centisome position: 32.26
GC content: 42.18
Gene sequence:
>633_bases ATGCCATATACATCAGTTTCTACCTATGCCAGAGCTTTATCAGGAAATAAGCTACCTCATGTTGCTGCAGGAGATTATGA AAATAAATTATCAACAAAAATCATGAAAGGCATCTTGTATGTGCTTACCGCAGGACTGGCCTACGGATTTACGCGAGTAA TTGAACATTATTGCAATGTTACGCCTAAAGTTGATGAGTTCTGTGCCAATGCAGGGAATATCCATAATCACCTTGCAGAT GCTGTACGTGATGAACAATTTATTATAGATGTCGAGCTTTCTGATGGTCGGATGTTAACATTCGAACAACTCTCGCTGAT GGCTGGACGTGAGCCAATCGTCAGGATATCGGATGGCGAACATAGCGTTGAGGTTAAGGGGTCCTTTGAAGATATCTGTA TGAGACTGGAAGAGGGCTTTTTTGAAGCGCCAGCATACTATGGTTATGATATTGATGAAAAATATAAAACCGTCAGAGAG CGAATAGCAGCATATAATGCCTTACCTCAGGCATTAGGCGCCATTCCGAGTTTAAAATATTATACCGATCGGGCCAACGA CATGCCGGAGGCGAAAGCGCAACGGGCGGCCGACATAAAAGATCGTTACCATAACTATTTAGACAAGTATTAA
Upstream 100 bases:
>100_bases AAATGTATGCCTTTGAGCAATTTTGTTGATTGACATATCGTCATAATGAGAGAGGAGTAGGACATATAAAGCTATTGAGC AAAATTTGAAGGAGCAGGAT
Downstream 100 bases:
>100_bases AAAGCGTTTATGTTTAGCCAGTTTTGTTAGAAATCAGACTCGCTGAGCTGGCGTTAAAAATTTTAACACGCCGCTATTTT GGCGGCGTGTCGCAAAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Salmonella translocated effector A [H]
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MPYTSVSTYARALSGNKLPHVAAGDYENKLSTKIMKGILYVLTAGLAYGFTRVIEHYCNVTPKVDEFCANAGNIHNHLAD AVRDEQFIIDVELSDGRMLTFEQLSLMAGREPIVRISDGEHSVEVKGSFEDICMRLEEGFFEAPAYYGYDIDEKYKTVRE RIAAYNALPQALGAIPSLKYYTDRANDMPEAKAQRAADIKDRYHNYLDKY
Sequences:
>Translated_210_residues MPYTSVSTYARALSGNKLPHVAAGDYENKLSTKIMKGILYVLTAGLAYGFTRVIEHYCNVTPKVDEFCANAGNIHNHLAD AVRDEQFIIDVELSDGRMLTFEQLSLMAGREPIVRISDGEHSVEVKGSFEDICMRLEEGFFEAPAYYGYDIDEKYKTVRE RIAAYNALPQALGAIPSLKYYTDRANDMPEAKAQRAADIKDRYHNYLDKY >Mature_209_residues PYTSVSTYARALSGNKLPHVAAGDYENKLSTKIMKGILYVLTAGLAYGFTRVIEHYCNVTPKVDEFCANAGNIHNHLADA VRDEQFIIDVELSDGRMLTFEQLSLMAGREPIVRISDGEHSVEVKGSFEDICMRLEEGFFEAPAYYGYDIDEKYKTVRER IAAYNALPQALGAIPSLKYYTDRANDMPEAKAQRAADIKDRYHNYLDKY
Specific function: Effector proteins function to alter host cell physiology and promote bacterial survival in host tissues. Could be required for passage of bacteria from the peritoneal cavity into the spleen, for survival and replication within host cells, or for avoiding
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted. Host cytoplasm. Note=Secreted via type III secretion systems 1 and 2 (SPI-1 and SPI-2 TTSS), and delivered into the host cytoplasm. Localizes to the trans-Golgi network within both transfected and infected host epithelial cells [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23728; Mature: 23597
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYTSVSTYARALSGNKLPHVAAGDYENKLSTKIMKGILYVLTAGLAYGFTRVIEHYCNV CCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TPKVDEFCANAGNIHNHLADAVRDEQFIIDVELSDGRMLTFEQLSLMAGREPIVRISDGE CCCHHHHHCCCCHHHHHHHHHHCCCEEEEEEEECCCCEEHHHHHHHHHCCCCEEEECCCC HSVEVKGSFEDICMRLEEGFFEAPAYYGYDIDEKYKTVRERIAAYNALPQALGAIPSLKY EEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH YTDRANDMPEAKAQRAADIKDRYHNYLDKY HHCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PYTSVSTYARALSGNKLPHVAAGDYENKLSTKIMKGILYVLTAGLAYGFTRVIEHYCNV CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TPKVDEFCANAGNIHNHLADAVRDEQFIIDVELSDGRMLTFEQLSLMAGREPIVRISDGE CCCHHHHHCCCCHHHHHHHHHHCCCEEEEEEEECCCCEEHHHHHHHHHCCCCEEEECCCC HSVEVKGSFEDICMRLEEGFFEAPAYYGYDIDEKYKTVRERIAAYNALPQALGAIPSLKY EEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH YTDRANDMPEAKAQRAADIKDRYHNYLDKY HHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA