| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is treY [H]
Identifier: 29141919
GI number: 29141919
Start: 1518729
End: 1521257
Strand: Reverse
Name: treY [H]
Synonym: t1472
Alternate gene names: 29141919
Gene position: 1521257-1518729 (Counterclockwise)
Preceding gene: 29141920
Following gene: 29141918
Centisome position: 31.75
GC content: 53.97
Gene sequence:
>2529_bases ATGATCCCAACTGCAACGTATCGTCTTCAGTTTCGCAATAGCATGACCTTCGATCGCGCTGCGGCGCTGGTGCCTTACCT TAAAAATCTGGGTATCAGCCATCTTTATGCCTCACCCATCTTTACCGCCACCAAAGCGTCAACGCATGGTTATGATGTCA CCGATGCGAATGAGATTGAGCCTTCTATTGGCGGGCGCGAAGGATTTGAAAGACTGGTGGCTGAACTTAAAGCACAAGGT CTGGGATTGATCATCGATATTGTGCCTAATCACATGGCCAGCTCGCTGGAAAACGCCTGGTGGCGCGACGTGCTTGAATA TGGCAAGGAGAGCCGTTACGCGCGCCATTTCGATATTGACTGGTCGCGCCGACTGACGCTGCCTTTTTTAGGCGACACGT TTGACGCCGTGCTGGGAAACGGAGAAATTGCGATCAAGCCGGATCCCGTTACGGGTAAACCCACGTTCGCCTATTATGAT AATTATTATCCGCTTGCGCCAGCGACGTGGCAGGGGCGCGAGGCTGAAATACTGGCGCTTACCGATAAAGCCGCTATTGC TGATTTGCATGAGCGCCAGCCGTGGAAATTAATGTCTTGGCGCGATGCCGCTCGCTCGCTTTCATATCGGCGTTTCTTTG AGGTCACAGGGCTGGTGGGAATGCGGGTGGAAGATAAAATCGTCTTCGACGATACACATCGGCTGATTCTGGAGCTGGTC AGAACGGGGGCGGTTGACGGTTTACGTATCGATCATATCGACGGCCTTGCCGATCCGAAAGCCTATCTTGCGCGTTTACG TCAGGAAGTGGGACCGGCGTGCTATATCACCGTGGAAAAAATTCTCGCTAAAGGCGAGCAACTTCCTGATGACTGGCCGG TTTCCGGCACCACAGGCTATGAATTCATCGCCTCGCTGGCGGAAGTACTGGTTGACGATAAGCAGATAGACAATCTGCGC CAGGCTTACGAGACCGTAACAGGCGCGCCAGTGGATATGCGGGCGGAATTACGGGCGGCTAAATTGCTGATGGTCGATCG CAATTTTGAGGGGGAATTTACCCGGCTGCTCGCGCTTGCGCTGTCGATTGCCAGCGAGCTACAGATCGCACAGGAAGAGA GCGTCGTTCGGCAGGCGTTACGCGAGTTATTAATTGCCTTTCCCGTATATCGCACTTACGGCACGGCAGAAGGGCTACCG CCGACCGATATTTGCCTGTTACACCGTATTGTGGAACGGGTAAAGACGCTTGAAAACCCTCCGCAGCCAGAAGCGCTTAC ATTTCTGAGCCGTCTTCTTACCGGCGATGTTCCCGTCTCCAGCCAGGAGGAGGCGACACAGTTTCGCGTTCGGTTCCAGC AACTCACCGGTCCGCTGATGGCGAAATCGGTAGAGGATACGCTTTTCTTTCGTCAAAACATGGGACTGGCGTTAAATGAA GTCGGCGCCGAGCCCGTCACGCATCACTTCTCCATCGAACGCTTTCACCATGAGATGAAAACCCGACAGGCGCGACAGCC TGATGCGTTATCCGGTACGTCGACCCACGATACCAAGCGAGGCGAGGATGCGCGAGCACGCCTGTATACGCTTACCGAAG CGCCGGAACAGTGGAGCGAATGCCTTGCCCGCTGGCGGCAGATGAACCAGACCCATGTCAAATTTTTGAATGATGGCACT GCGCCAAAATCGGCGGATACGTGGATGCTATATCAGGCGCTGACCGGCGTCTGGCCCCCGATGCTACAACCACAGGACGA AACAGGTTTAAACGCGCTGAAAATACGCTTTGAAGCCTTTGTGGAGAAAGCGCTACGCGAAGCGAAGCTACGTACCGATT GGGTGGACAGTAATGAGGCTTACGAAACGGCAATGCTTGATTACGCCCGTTATTTACTGGCGCCGGATAATCAGACATTT TTGCAGGATTTTTATCGTTCCTTGCAACCCTTCATCCGCGCAGGACTGGTTAACAGCCTGACGCAGACCGTTATCAAATT AACCGCGCCGGGAGTACCTGATATCTATCAGGGGAGCGAGGCGTTGAATTTTAGCCTTGTCGATCCCGACAACCGCCGCG AACCAGATTTCGCCACGCTGGCGCAGCAGTTAGACCAACTGACGCCGGGAGTTTTCTCGCGCGAAGAGAGTTGGCTGGAC GGGCAGGTGAATCAGTATGCCACCGCCGCCTTACTGCGTTTGCGTCAGCAGAATCATGAGCTCTTCCGTTTTGGCGACTA TATACCGCTGCGGGCTGTTGGTCAGCGTGCCGACAAGGTCATCGCTTACGCCAGAGTCAATCATGATGATGCGCTGATTG TTGTTGCGCCCCGACTGGTGTTCGCCGAATGTGACGGCTTATTATCACAATCGCATAGCGGTTTCTGGTCAGGAACCGAC ATTATTATACCCGGACAGCTTAATCAGCGTCGTTATCGCAATGTGCTTACCCAGGAGAGGTTAATGCCTGGTGAACGCCT GTCGTTGGCCTCACATCAGGGCGGCGTACTGGTTTTAATGAGCGACTGA
Upstream 100 bases:
>100_bases ATTTACCGGGTAAGACTCTCTTCGCCTGGCCGAATGAATCCACCGGGTCGCTTTCCCAACATTCTCTTATTGTCCGCTTA GCCCAGGGAGAGTCTGCATC
Downstream 100 bases:
>100_bases GTTTATGTGTTGATGTGCCGTGACAGGACAACGTTTACCGTGGGTGGAGAAAGAGAATGACAACAAACAGGGCTTTTGAA ATCAGATCAGGATACAGCCA
Product: hydrolase
Products: NA
Alternate protein names: (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase [H]
Number of amino acids: Translated: 842; Mature: 842
Protein sequence:
>842_residues MIPTATYRLQFRNSMTFDRAAALVPYLKNLGISHLYASPIFTATKASTHGYDVTDANEIEPSIGGREGFERLVAELKAQG LGLIIDIVPNHMASSLENAWWRDVLEYGKESRYARHFDIDWSRRLTLPFLGDTFDAVLGNGEIAIKPDPVTGKPTFAYYD NYYPLAPATWQGREAEILALTDKAAIADLHERQPWKLMSWRDAARSLSYRRFFEVTGLVGMRVEDKIVFDDTHRLILELV RTGAVDGLRIDHIDGLADPKAYLARLRQEVGPACYITVEKILAKGEQLPDDWPVSGTTGYEFIASLAEVLVDDKQIDNLR QAYETVTGAPVDMRAELRAAKLLMVDRNFEGEFTRLLALALSIASELQIAQEESVVRQALRELLIAFPVYRTYGTAEGLP PTDICLLHRIVERVKTLENPPQPEALTFLSRLLTGDVPVSSQEEATQFRVRFQQLTGPLMAKSVEDTLFFRQNMGLALNE VGAEPVTHHFSIERFHHEMKTRQARQPDALSGTSTHDTKRGEDARARLYTLTEAPEQWSECLARWRQMNQTHVKFLNDGT APKSADTWMLYQALTGVWPPMLQPQDETGLNALKIRFEAFVEKALREAKLRTDWVDSNEAYETAMLDYARYLLAPDNQTF LQDFYRSLQPFIRAGLVNSLTQTVIKLTAPGVPDIYQGSEALNFSLVDPDNRREPDFATLAQQLDQLTPGVFSREESWLD GQVNQYATAALLRLRQQNHELFRFGDYIPLRAVGQRADKVIAYARVNHDDALIVVAPRLVFAECDGLLSQSHSGFWSGTD IIIPGQLNQRRYRNVLTQERLMPGERLSLASHQGGVLVLMSD
Sequences:
>Translated_842_residues MIPTATYRLQFRNSMTFDRAAALVPYLKNLGISHLYASPIFTATKASTHGYDVTDANEIEPSIGGREGFERLVAELKAQG LGLIIDIVPNHMASSLENAWWRDVLEYGKESRYARHFDIDWSRRLTLPFLGDTFDAVLGNGEIAIKPDPVTGKPTFAYYD NYYPLAPATWQGREAEILALTDKAAIADLHERQPWKLMSWRDAARSLSYRRFFEVTGLVGMRVEDKIVFDDTHRLILELV RTGAVDGLRIDHIDGLADPKAYLARLRQEVGPACYITVEKILAKGEQLPDDWPVSGTTGYEFIASLAEVLVDDKQIDNLR QAYETVTGAPVDMRAELRAAKLLMVDRNFEGEFTRLLALALSIASELQIAQEESVVRQALRELLIAFPVYRTYGTAEGLP PTDICLLHRIVERVKTLENPPQPEALTFLSRLLTGDVPVSSQEEATQFRVRFQQLTGPLMAKSVEDTLFFRQNMGLALNE VGAEPVTHHFSIERFHHEMKTRQARQPDALSGTSTHDTKRGEDARARLYTLTEAPEQWSECLARWRQMNQTHVKFLNDGT APKSADTWMLYQALTGVWPPMLQPQDETGLNALKIRFEAFVEKALREAKLRTDWVDSNEAYETAMLDYARYLLAPDNQTF LQDFYRSLQPFIRAGLVNSLTQTVIKLTAPGVPDIYQGSEALNFSLVDPDNRREPDFATLAQQLDQLTPGVFSREESWLD GQVNQYATAALLRLRQQNHELFRFGDYIPLRAVGQRADKVIAYARVNHDDALIVVAPRLVFAECDGLLSQSHSGFWSGTD IIIPGQLNQRRYRNVLTQERLMPGERLSLASHQGGVLVLMSD >Mature_842_residues MIPTATYRLQFRNSMTFDRAAALVPYLKNLGISHLYASPIFTATKASTHGYDVTDANEIEPSIGGREGFERLVAELKAQG LGLIIDIVPNHMASSLENAWWRDVLEYGKESRYARHFDIDWSRRLTLPFLGDTFDAVLGNGEIAIKPDPVTGKPTFAYYD NYYPLAPATWQGREAEILALTDKAAIADLHERQPWKLMSWRDAARSLSYRRFFEVTGLVGMRVEDKIVFDDTHRLILELV RTGAVDGLRIDHIDGLADPKAYLARLRQEVGPACYITVEKILAKGEQLPDDWPVSGTTGYEFIASLAEVLVDDKQIDNLR QAYETVTGAPVDMRAELRAAKLLMVDRNFEGEFTRLLALALSIASELQIAQEESVVRQALRELLIAFPVYRTYGTAEGLP PTDICLLHRIVERVKTLENPPQPEALTFLSRLLTGDVPVSSQEEATQFRVRFQQLTGPLMAKSVEDTLFFRQNMGLALNE VGAEPVTHHFSIERFHHEMKTRQARQPDALSGTSTHDTKRGEDARARLYTLTEAPEQWSECLARWRQMNQTHVKFLNDGT APKSADTWMLYQALTGVWPPMLQPQDETGLNALKIRFEAFVEKALREAKLRTDWVDSNEAYETAMLDYARYLLAPDNQTF LQDFYRSLQPFIRAGLVNSLTQTVIKLTAPGVPDIYQGSEALNFSLVDPDNRREPDFATLAQQLDQLTPGVFSREESWLD GQVNQYATAALLRLRQQNHELFRFGDYIPLRAVGQRADKVIAYARVNHDDALIVVAPRLVFAECDGLLSQSHSGFWSGTD IIIPGQLNQRRYRNVLTQERLMPGERLSLASHQGGVLVLMSD
Specific function: Catalyzes the conversion of maltooligosaccharide into the non-reducing saccharide, maltooligosyl trehalose (alpha- maltooligosyl alpha-D-glucoside) by intramolecular transglycosylation [H]
COG id: COG3280
COG function: function code G; Maltooligosyl trehalose synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Drosophila melanogaster, GI45549022, Length=75, Percent_Identity=44, Blast_Score=68, Evalue=3e-11, Organism=Drosophila melanogaster, GI221330053, Length=93, Percent_Identity=38.7096774193548, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24586587, Length=75, Percent_Identity=45.3333333333333, Blast_Score=67, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006047 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013797 - InterPro: IPR012767 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =5.4.99.15 [H]
Molecular weight: Translated: 95107; Mature: 95107
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPTATYRLQFRNSMTFDRAAALVPYLKNLGISHLYASPIFTATKASTHGYDVTDANEIE CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHCCCCEECCCCCCCCCCCCCCCCC PSIGGREGFERLVAELKAQGLGLIIDIVPNHMASSLENAWWRDVLEYGKESRYARHFDID CCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCHHCCCEEEECCC WSRRLTLPFLGDTFDAVLGNGEIAIKPDPVTGKPTFAYYDNYYPLAPATWQGREAEILAL CCCEEECCCCCCHHHHHHCCCEEEEECCCCCCCCCEEEECCEECCCCCCCCCCCCEEEEE TDKAAIADLHERQPWKLMSWRDAARSLSYRRFFEVTGLVGMRVEDKIVFDDTHRLILELV ECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEECHHHHHHHHHH RTGAVDGLRIDHIDGLADPKAYLARLRQEVGPACYITVEKILAKGEQLPDDWPVSGTTGY HHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCEEEEEHHHHHHCCCCCCCCCCCCCCCHH EFIASLAEVLVDDKQIDNLRQAYETVTGAPVDMRAELRAAKLLMVDRNFEGEFTRLLALA HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEECCCCHHHHHHHHHH LSIASELQIAQEESVVRQALRELLIAFPVYRTYGTAEGLPPTDICLLHRIVERVKTLENP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC PQPEALTFLSRLLTGDVPVSSQEEATQFRVRFQQLTGPLMAKSVEDTLFFRQNMGLALNE CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHH VGAEPVTHHFSIERFHHEMKTRQARQPDALSGTSTHDTKRGEDARARLYTLTEAPEQWSE CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCHHHHHH CLARWRQMNQTHVKFLNDGTAPKSADTWMLYQALTGVWPPMLQPQDETGLNALKIRFEAF HHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH VEKALREAKLRTDWVDSNEAYETAMLDYARYLLAPDNQTFLQDFYRSLQPFIRAGLVNSL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH TQTVIKLTAPGVPDIYQGSEALNFSLVDPDNRREPDFATLAQQLDQLTPGVFSREESWLD HHHHHHHCCCCCCCHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC GQVNQYATAALLRLRQQNHELFRFGDYIPLRAVGQRADKVIAYARVNHDDALIVVAPRLV CCHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHEEEEEEECCCCEEEEEECHHH FAECDGLLSQSHSGFWSGTDIIIPGQLNQRRYRNVLTQERLMPGERLSLASHQGGVLVLM HHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCEEEEE SD CC >Mature Secondary Structure MIPTATYRLQFRNSMTFDRAAALVPYLKNLGISHLYASPIFTATKASTHGYDVTDANEIE CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHCCCCEECCCCCCCCCCCCCCCCC PSIGGREGFERLVAELKAQGLGLIIDIVPNHMASSLENAWWRDVLEYGKESRYARHFDID CCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCHHCCCEEEECCC WSRRLTLPFLGDTFDAVLGNGEIAIKPDPVTGKPTFAYYDNYYPLAPATWQGREAEILAL CCCEEECCCCCCHHHHHHCCCEEEEECCCCCCCCCEEEECCEECCCCCCCCCCCCEEEEE TDKAAIADLHERQPWKLMSWRDAARSLSYRRFFEVTGLVGMRVEDKIVFDDTHRLILELV ECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEECHHHHHHHHHH RTGAVDGLRIDHIDGLADPKAYLARLRQEVGPACYITVEKILAKGEQLPDDWPVSGTTGY HHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCEEEEEHHHHHHCCCCCCCCCCCCCCCHH EFIASLAEVLVDDKQIDNLRQAYETVTGAPVDMRAELRAAKLLMVDRNFEGEFTRLLALA HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEECCCCHHHHHHHHHH LSIASELQIAQEESVVRQALRELLIAFPVYRTYGTAEGLPPTDICLLHRIVERVKTLENP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC PQPEALTFLSRLLTGDVPVSSQEEATQFRVRFQQLTGPLMAKSVEDTLFFRQNMGLALNE CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHH VGAEPVTHHFSIERFHHEMKTRQARQPDALSGTSTHDTKRGEDARARLYTLTEAPEQWSE CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCHHHHHH CLARWRQMNQTHVKFLNDGTAPKSADTWMLYQALTGVWPPMLQPQDETGLNALKIRFEAF HHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH VEKALREAKLRTDWVDSNEAYETAMLDYARYLLAPDNQTFLQDFYRSLQPFIRAGLVNSL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH TQTVIKLTAPGVPDIYQGSEALNFSLVDPDNRREPDFATLAQQLDQLTPGVFSREESWLD HHHHHHHCCCCCCCHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC GQVNQYATAALLRLRQQNHELFRFGDYIPLRAVGQRADKVIAYARVNHDDALIVVAPRLV CCHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHEEEEEEECCCCEEEEEECHHH FAECDGLLSQSHSGFWSGTDIIIPGQLNQRRYRNVLTQERLMPGERLSLASHQGGVLVLM HHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCEEEEE SD CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8605217; 8611744 [H]