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The map label for this gene is pqaA

Identifier: 29141912

GI number: 29141912

Start: 1506693

End: 1508249

Strand: Reverse

Name: pqaA

Synonym: t1463

Alternate gene names: NA

Gene position: 1508249-1506693 (Counterclockwise)

Preceding gene: 29141913

Following gene: 29141911

Centisome position: 31.47

GC content: 41.81

Gene sequence:

>1557_bases
ATGTTTAAGAGGTATTTATGGAAATTATGCTGGTTGGCATTTGCCCTTGTAAAGCGCGGGGAAAGCATGAAAAAAATATA
TCTCGTTGTTATCGTACTGTTTTTTATTTCTACAAAAGTTTATACACTACTTCATAACAACATCTTCTTTTGTCGAAACA
GCCCGGAGTGTGATTTGTCTCATGTTCTCCCCGACTACCGGGAGCAGATTTCAGGCACACCGCTAAAATATACCTTAATT
AGTACAGCTCCATTAGCACAGGTGGTAGTCAGACACTATGAATTATTATCGCAACACTGGTCGCCAGATGACATGGTAAC
CCCTGCGCAATGGCGACATAACGTTGATATTTATATCCCTGAAACGGCAAAAGAGCACCATGCTTTGGTGGTTGTAAACA
ACGGAATTAATTATGAAAAAGGCATACAAATCCCCAGTAAACCCGTTGATTTTACTCAGCAAACACTGGCAAGCATCGCC
CGTGATACGAATACCATCGTAATATCAGTGAGTGATATACCTAACCAATATTTAACCTTTCAGGATGATAAAAAACCACT
GAAAGAGGACGAGAGCGTTTCCCGAAGCTGGGCATTATTTATGGAAGCGCCGGAGCAACGTGAGTTAATGCCTTTAAATA
TTCCTATGGTCACTGCCATATCGCAAGCGATGAGATTAGCAAAAAAGGAGTTAACGCAATGGAATATAAATTCCTTTATC
ATTACAGGTATTTCAAAGCGTGGGTGGACCACCTGGTTGTCAGCTATTGCCGATCCTGATGTTGAAGCAATTGTTCCCTT
CGCCATTGATCTACTTGATATTGATGCTTCACTTGAGCATATTTATCAATCATACGGTGGAAATTGGCCCATTACATTCT
ACCCCTACTACCAGCAAGGCATAGATGAGAAAATAAAATCCCCCACATTTACCCAGCTAAGGCAAATAATAGATCCGTTA
AGATATCTCAATACTATTTACCAACCCCGCCTTGCAATACCGAAATATATTATTAATGCAAGTGGCGATGATTTCTTCGT
ACCAGACAATACTCGCTTTTATTATAGCAAACTTCCTGGCGTAAAATCATTACGTATAGTGCCTAATATGAACCACTACT
CAATTAACCAGTTCGCTGAAGGAAGCCTCGTTCCATTTATTAACCGGTTTCAAAGTAAAAAAACATTACCGCAGTTGATC
GGCCTTATTCACCACCATCTTCTTACGGTCTATTTCTCAGAAGCGCCGGTAAAAGTCGTTCGCTGGACAGCCAACAATCC
AAATGCGCGTGATTTCCGTTATGCCTGTGGCATCCGCTATCAGCCGCTTACAATAGATATTCCCGCCAACAATAAGATCA
GTATTACGTTAAATGAACCGAAGACAGGTTGGGAAGCTACCTATATCGAAGCCACTTTTAATGATGGCTATGTCGCCACG
AGTCAGGTTTATATTACGCCCGATGAAAAATACCCACAGACAGCACCACCTTCCGTTAACGCCGCATGTCAAACGTTACC
GGGGCGTGGATTAGGGGAAAACGATAGCCCCGATTGA

Upstream 100 bases:

>100_bases
ACCGCTAATAGCGAAACCAGAAACAGAATAATGTGACAACGTCACAAGCATTATTACTCCCTTCTTCCCTTATTTATCAA
AAGTATTGTACTTATATTGA

Downstream 100 bases:

>100_bases
ATTTTCAAGTAATTGTCTGATTTTAAATAATTTTATCCATCACGCTTGCGATGGATAAAAATCCTCTGCGATAAATTTTT
GTTATATTGATCACGTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: PhoPQ-Activated Pathogenicity-Related Protein; PhoPQ-Activated Pathogenicity-Like Protein PqaA Type; PhoPQ-Activated Pathogenicity-Related Protein PqaA Type; PhoPQ-Regulated Protein; Phopq-Activated Pathogenicity-Related Protein Pqaa Type; Secreted Protein; Transmembrane Protein; PhoPQ-Activated Pathogenicity-Like Protein

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MFKRYLWKLCWLAFALVKRGESMKKIYLVVIVLFFISTKVYTLLHNNIFFCRNSPECDLSHVLPDYREQISGTPLKYTLI
STAPLAQVVVRHYELLSQHWSPDDMVTPAQWRHNVDIYIPETAKEHHALVVVNNGINYEKGIQIPSKPVDFTQQTLASIA
RDTNTIVISVSDIPNQYLTFQDDKKPLKEDESVSRSWALFMEAPEQRELMPLNIPMVTAISQAMRLAKKELTQWNINSFI
ITGISKRGWTTWLSAIADPDVEAIVPFAIDLLDIDASLEHIYQSYGGNWPITFYPYYQQGIDEKIKSPTFTQLRQIIDPL
RYLNTIYQPRLAIPKYIINASGDDFFVPDNTRFYYSKLPGVKSLRIVPNMNHYSINQFAEGSLVPFINRFQSKKTLPQLI
GLIHHHLLTVYFSEAPVKVVRWTANNPNARDFRYACGIRYQPLTIDIPANNKISITLNEPKTGWEATYIEATFNDGYVAT
SQVYITPDEKYPQTAPPSVNAACQTLPGRGLGENDSPD

Sequences:

>Translated_518_residues
MFKRYLWKLCWLAFALVKRGESMKKIYLVVIVLFFISTKVYTLLHNNIFFCRNSPECDLSHVLPDYREQISGTPLKYTLI
STAPLAQVVVRHYELLSQHWSPDDMVTPAQWRHNVDIYIPETAKEHHALVVVNNGINYEKGIQIPSKPVDFTQQTLASIA
RDTNTIVISVSDIPNQYLTFQDDKKPLKEDESVSRSWALFMEAPEQRELMPLNIPMVTAISQAMRLAKKELTQWNINSFI
ITGISKRGWTTWLSAIADPDVEAIVPFAIDLLDIDASLEHIYQSYGGNWPITFYPYYQQGIDEKIKSPTFTQLRQIIDPL
RYLNTIYQPRLAIPKYIINASGDDFFVPDNTRFYYSKLPGVKSLRIVPNMNHYSINQFAEGSLVPFINRFQSKKTLPQLI
GLIHHHLLTVYFSEAPVKVVRWTANNPNARDFRYACGIRYQPLTIDIPANNKISITLNEPKTGWEATYIEATFNDGYVAT
SQVYITPDEKYPQTAPPSVNAACQTLPGRGLGENDSPD
>Mature_518_residues
MFKRYLWKLCWLAFALVKRGESMKKIYLVVIVLFFISTKVYTLLHNNIFFCRNSPECDLSHVLPDYREQISGTPLKYTLI
STAPLAQVVVRHYELLSQHWSPDDMVTPAQWRHNVDIYIPETAKEHHALVVVNNGINYEKGIQIPSKPVDFTQQTLASIA
RDTNTIVISVSDIPNQYLTFQDDKKPLKEDESVSRSWALFMEAPEQRELMPLNIPMVTAISQAMRLAKKELTQWNINSFI
ITGISKRGWTTWLSAIADPDVEAIVPFAIDLLDIDASLEHIYQSYGGNWPITFYPYYQQGIDEKIKSPTFTQLRQIIDPL
RYLNTIYQPRLAIPKYIINASGDDFFVPDNTRFYYSKLPGVKSLRIVPNMNHYSINQFAEGSLVPFINRFQSKKTLPQLI
GLIHHHLLTVYFSEAPVKVVRWTANNPNARDFRYACGIRYQPLTIDIPANNKISITLNEPKTGWEATYIEATFNDGYVAT
SQVYITPDEKYPQTAPPSVNAACQTLPGRGLGENDSPD

Specific function: Unknown

COG id: COG4287

COG function: function code R; PhoPQ-activated pathogenicity-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59309; Mature: 59309

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKRYLWKLCWLAFALVKRGESMKKIYLVVIVLFFISTKVYTLLHNNIFFCRNSPECDLS
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHH
HVLPDYREQISGTPLKYTLISTAPLAQVVVRHYELLSQHWSPDDMVTPAQWRHNVDIYIP
HCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEC
ETAKEHHALVVVNNGINYEKGIQIPSKPVDFTQQTLASIARDTNTIVISVSDIPNQYLTF
CCCCCCEEEEEEECCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEE
QDDKKPLKEDESVSRSWALFMEAPEQRELMPLNIPMVTAISQAMRLAKKELTQWNINSFI
CCCCCCCCCCHHHHHHEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEE
ITGISKRGWTTWLSAIADPDVEAIVPFAIDLLDIDASLEHIYQSYGGNWPITFYPYYQQG
EEECCCCCHHHHHHHHCCCCHHEEHHHHEEEEECCHHHHHHHHHHCCCCCEEEECHHHHC
IDEKIKSPTFTQLRQIIDPLRYLNTIYQPRLAIPKYIINASGDDFFVPDNTRFYYSKLPG
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCEEECCCCCEEEEECCCC
VKSLRIVPNMNHYSINQFAEGSLVPFINRFQSKKTLPQLIGLIHHHLLTVYFSEAPVKVV
CCEEEEECCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
RWTANNPNARDFRYACGIRYQPLTIDIPANNKISITLNEPKTGWEATYIEATFNDGYVAT
EEECCCCCCCCEEEECCCEECCEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCEEEE
SQVYITPDEKYPQTAPPSVNAACQTLPGRGLGENDSPD
EEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MFKRYLWKLCWLAFALVKRGESMKKIYLVVIVLFFISTKVYTLLHNNIFFCRNSPECDLS
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHH
HVLPDYREQISGTPLKYTLISTAPLAQVVVRHYELLSQHWSPDDMVTPAQWRHNVDIYIP
HCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEC
ETAKEHHALVVVNNGINYEKGIQIPSKPVDFTQQTLASIARDTNTIVISVSDIPNQYLTF
CCCCCCEEEEEEECCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEE
QDDKKPLKEDESVSRSWALFMEAPEQRELMPLNIPMVTAISQAMRLAKKELTQWNINSFI
CCCCCCCCCCHHHHHHEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEE
ITGISKRGWTTWLSAIADPDVEAIVPFAIDLLDIDASLEHIYQSYGGNWPITFYPYYQQG
EEECCCCCHHHHHHHHCCCCHHEEHHHHEEEEECCHHHHHHHHHHCCCCCEEEECHHHHC
IDEKIKSPTFTQLRQIIDPLRYLNTIYQPRLAIPKYIINASGDDFFVPDNTRFYYSKLPG
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCEEECCCCCEEEEECCCC
VKSLRIVPNMNHYSINQFAEGSLVPFINRFQSKKTLPQLIGLIHHHLLTVYFSEAPVKVV
CCEEEEECCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
RWTANNPNARDFRYACGIRYQPLTIDIPANNKISITLNEPKTGWEATYIEATFNDGYVAT
EEECCCCCCCCEEEECCCEECCEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCEEEE
SQVYITPDEKYPQTAPPSVNAACQTLPGRGLGENDSPD
EEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA