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The map label for this gene is dmsA [H]

Identifier: 29141873

GI number: 29141873

Start: 1465384

End: 1467822

Strand: Reverse

Name: dmsA [H]

Synonym: t1420

Alternate gene names: 29141873

Gene position: 1467822-1465384 (Counterclockwise)

Preceding gene: 29141875

Following gene: 29141872

Centisome position: 30.63

GC content: 54.12

Gene sequence:

>2439_bases
ATGCCCGGAGAAAAGCAGCAAACAGGCGTTAGCCGCAGGACGTTAGTGAAATCAGCGGCGCTTGGCTCACTGGCGCTGGC
TGCCGGAGGCGTATCTTTACCGTTTGGGATGCGTACCGCGGCCGCGGCGGTGCAGCAGGCTATGCGCAACGAAGAAGATA
AAATCGTCTGGGGCGCCTGTTCGGTCAACTGCGGCAGTCGCTGCGCCCTGCGTCTGCATGTAAAAGATAATGAAGTCTGG
TGGGTTGAAACTGATAACACTGGCGACGATGTCTACGGCAATCATCAGGTTCGCGCCTGTCTGCGGGGCCGTTCAATCCG
TCGGCGCATTAACCATCCGGATCGCCTTAACTATCCCATGAAACGCGTTGGCCGCCGCGGCGAAGGCAAATTTGAACGCA
TTAGCTGGCAGGAAGCGCTGGACACCATTAGCGCCAGCCTGAAAAAGACCGTAGAGATCTACGGCAATGAAGCCGTTTAT
ATCCACTATTCATCCGGCATCGTAGGCGGCAACATAACCCGCTCGTCGCCTTCCGCCTCGCCGGTGAAGCGTTTGATGAA
CTGCTACGGCGGTTCGTTGAATCAATACGGCTCATACAGTACCGCGCAAATTTCTTGCGCCATGCCCTACACCTATGGAT
CCAACGACGGCAACAGCACATCTGATATCGAAAACAGTAAACTGGTGGTCATGTTCGGCAATAATCCGGCTGAAACACGC
ATGAGCGGCGGCGGCATTACCTGGTTTCTGGAGCAAGCGCGTGAACGCTCAAATGCGCGCATGATCGTGATAGATCCGCG
CTATACCGATACCGCTGCCGGACGTGAAGACGAGTGGATACCTATTCGCCCCGGCACCGACGCCGCGCTGGTGGCGGGAA
TTGCCTGGGTATTGATTAACGAAAATCTCGTTGACCAGCCTTTTCTCGACAACTATTGCATCGGCTACGATGAAAAGACC
CTTCCGGCTGACGCCCCCCCCAATGGCCATTATAAGGCTTATATTTTGGGCCAGGGCGAGGACGGTATCGCCAAAACGCC
GCAGTGGGCGTCACACATTACCGGCATCCCCGCCGATCGGATTATCAAACTGGCGCGCGAGATAGGTAGCGTCAAGCCGG
CCTACATCTGTCAGGGTTGGGGCCCGCAGCGTCAGGCGAACGGCGAACAAACCGCTCGCGCCATCGCCATGTTTCCGATT
CTGACCGGCAACGTCGGCATTCATGGCGGTAATGGCGGCGCACGCGAATCCACTTACACCATTACCATTGAACGTCTGCC
GGTCCTGGAGAATCCCGTTAAAACCGCCATCTCCTGCTTTAGCTGGACGGACGCCATTGCGCGCGGCCCGGAAATGACCG
CCCTGCGCGACGGCGTACGCGGCAAAGATAAGCTGGATGTCCCGATCAAATTTCTATGGAACTACGCTGGCAACACCCTG
ATTAATCAGCATTCGGATATTAATAAAACCCATGAAATTCTTCAGGATGAAGCAAAATGCGAAATGATTGTGGTCATCGA
CAATTTTATGACCTCTTCCGCGAAGTACGCCGATATTTTACTGCCGGATCTCATGACCGTCGAACAGGAAGATATCATCC
CCAATGATTACGCCGGCAATATGGGATATCTGATTTTTATCCAACCGGCGACGACGCCTAAGTTTGAACGCAAGCCCATC
TACTGGGTACTCAGCGAAATCGCCAGACGCCTCGGTGACGATGTGTATCAGCGGTTTACCGAAGGCCGTACCCAGGCGCA
ATGGCTGCAATATCTGTACGCCAAAATGCAGGCAAGAGATCCGGCATTGCCCGCGTATGACGAGCTAAAAAAAATGGGCA
TCTATAAACGCAAAGATCCCAACGGCCACTTTGTCGCCTATAAAAAATTTCGTGAAGATCCGCAGGCCAATCCGTTAAAA
ACGCCGTCCGGTAAAATCGAAATCTACTCAAGCAAACTCGCTCACATCGCCAGTACCTGGGAGCTGGCGGAAGGCGACGT
GATAAGCCCACTGCCGATTTATACCCCTACTTTTGAAGGATGGGACGATCCGAAGCGGAGCACCTTCCCGCTACAGCTGT
TTGGCTTTCACTATAAATCCCGTACCCATTCAAGCTACGGCAATATTGATGTTCTGCAGGCCGCCTGTCGCCAGGAGGTG
TGGATAAATCCGCTTGATGCGCAAAAACGTGGTATCGCGAATGGCGATAAGGTTCGCGTCTTTAACGATCGTGGAGAAGT
GCGTCTACCCGCCAAGGTCACGCCGCGTATTCTGCCGGGCGTCAGCGCGATGGGTCAGGGCGCATGGCATAATGCGGATA
TGGCTGGCGATAAAATTGACCACGGCGCCTGCATCAATACGCTCACGACGCTGCGTCCTTCCCCCCTGGCAAAAGGGAAT
CCTCAACATACAAATCTGGTGGAAATCGAAAAAATCTAA

Upstream 100 bases:

>100_bases
CTTACTCCCAAAGGGGTAAACTCATTACATCATTAGCATGTTAATAATTTCGCTATAGTCATTAATATATAGCGAAACGA
TAACGACAATGGAGTGAGTG

Downstream 100 bases:

>100_bases
GCCGCCTGCTCCGGGGCGTTTTTACGCGCCCGGAGCTCCCCGTTTTGCGAACACAACGACATTTAAAACTCTTTTTTGGA
TGAGCATAGTGAGGAGCTGT

Product: dimethyl sulfoxide reductase subunit

Products: NA

Alternate protein names: DMSO reductase [H]

Number of amino acids: Translated: 812; Mature: 811

Protein sequence:

>812_residues
MPGEKQQTGVSRRTLVKSAALGSLALAAGGVSLPFGMRTAAAAVQQAMRNEEDKIVWGACSVNCGSRCALRLHVKDNEVW
WVETDNTGDDVYGNHQVRACLRGRSIRRRINHPDRLNYPMKRVGRRGEGKFERISWQEALDTISASLKKTVEIYGNEAVY
IHYSSGIVGGNITRSSPSASPVKRLMNCYGGSLNQYGSYSTAQISCAMPYTYGSNDGNSTSDIENSKLVVMFGNNPAETR
MSGGGITWFLEQARERSNARMIVIDPRYTDTAAGREDEWIPIRPGTDAALVAGIAWVLINENLVDQPFLDNYCIGYDEKT
LPADAPPNGHYKAYILGQGEDGIAKTPQWASHITGIPADRIIKLAREIGSVKPAYICQGWGPQRQANGEQTARAIAMFPI
LTGNVGIHGGNGGARESTYTITIERLPVLENPVKTAISCFSWTDAIARGPEMTALRDGVRGKDKLDVPIKFLWNYAGNTL
INQHSDINKTHEILQDEAKCEMIVVIDNFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFIQPATTPKFERKPI
YWVLSEIARRLGDDVYQRFTEGRTQAQWLQYLYAKMQARDPALPAYDELKKMGIYKRKDPNGHFVAYKKFREDPQANPLK
TPSGKIEIYSSKLAHIASTWELAEGDVISPLPIYTPTFEGWDDPKRSTFPLQLFGFHYKSRTHSSYGNIDVLQAACRQEV
WINPLDAQKRGIANGDKVRVFNDRGEVRLPAKVTPRILPGVSAMGQGAWHNADMAGDKIDHGACINTLTTLRPSPLAKGN
PQHTNLVEIEKI

Sequences:

>Translated_812_residues
MPGEKQQTGVSRRTLVKSAALGSLALAAGGVSLPFGMRTAAAAVQQAMRNEEDKIVWGACSVNCGSRCALRLHVKDNEVW
WVETDNTGDDVYGNHQVRACLRGRSIRRRINHPDRLNYPMKRVGRRGEGKFERISWQEALDTISASLKKTVEIYGNEAVY
IHYSSGIVGGNITRSSPSASPVKRLMNCYGGSLNQYGSYSTAQISCAMPYTYGSNDGNSTSDIENSKLVVMFGNNPAETR
MSGGGITWFLEQARERSNARMIVIDPRYTDTAAGREDEWIPIRPGTDAALVAGIAWVLINENLVDQPFLDNYCIGYDEKT
LPADAPPNGHYKAYILGQGEDGIAKTPQWASHITGIPADRIIKLAREIGSVKPAYICQGWGPQRQANGEQTARAIAMFPI
LTGNVGIHGGNGGARESTYTITIERLPVLENPVKTAISCFSWTDAIARGPEMTALRDGVRGKDKLDVPIKFLWNYAGNTL
INQHSDINKTHEILQDEAKCEMIVVIDNFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFIQPATTPKFERKPI
YWVLSEIARRLGDDVYQRFTEGRTQAQWLQYLYAKMQARDPALPAYDELKKMGIYKRKDPNGHFVAYKKFREDPQANPLK
TPSGKIEIYSSKLAHIASTWELAEGDVISPLPIYTPTFEGWDDPKRSTFPLQLFGFHYKSRTHSSYGNIDVLQAACRQEV
WINPLDAQKRGIANGDKVRVFNDRGEVRLPAKVTPRILPGVSAMGQGAWHNADMAGDKIDHGACINTLTTLRPSPLAKGN
PQHTNLVEIEKI
>Mature_811_residues
PGEKQQTGVSRRTLVKSAALGSLALAAGGVSLPFGMRTAAAAVQQAMRNEEDKIVWGACSVNCGSRCALRLHVKDNEVWW
VETDNTGDDVYGNHQVRACLRGRSIRRRINHPDRLNYPMKRVGRRGEGKFERISWQEALDTISASLKKTVEIYGNEAVYI
HYSSGIVGGNITRSSPSASPVKRLMNCYGGSLNQYGSYSTAQISCAMPYTYGSNDGNSTSDIENSKLVVMFGNNPAETRM
SGGGITWFLEQARERSNARMIVIDPRYTDTAAGREDEWIPIRPGTDAALVAGIAWVLINENLVDQPFLDNYCIGYDEKTL
PADAPPNGHYKAYILGQGEDGIAKTPQWASHITGIPADRIIKLAREIGSVKPAYICQGWGPQRQANGEQTARAIAMFPIL
TGNVGIHGGNGGARESTYTITIERLPVLENPVKTAISCFSWTDAIARGPEMTALRDGVRGKDKLDVPIKFLWNYAGNTLI
NQHSDINKTHEILQDEAKCEMIVVIDNFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFIQPATTPKFERKPIY
WVLSEIARRLGDDVYQRFTEGRTQAQWLQYLYAKMQARDPALPAYDELKKMGIYKRKDPNGHFVAYKKFREDPQANPLKT
PSGKIEIYSSKLAHIASTWELAEGDVISPLPIYTPTFEGWDDPKRSTFPLQLFGFHYKSRTHSSYGNIDVLQAACRQEVW
INPLDAQKRGIANGDKVRVFNDRGEVRLPAKVTPRILPGVSAMGQGAWHNADMAGDKIDHGACINTLTTLRPSPLAKGNP
QHTNLVEIEKI

Specific function: Terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787870, Length=812, Percent_Identity=86.9458128078818, Blast_Score=1501, Evalue=0.0,
Organism=Escherichia coli, GI171474008, Length=805, Percent_Identity=71.1801242236025, Blast_Score=1225, Evalue=0.0,
Organism=Escherichia coli, GI87081797, Length=806, Percent_Identity=67.9900744416873, Blast_Score=1144, Evalue=0.0,
Organism=Escherichia coli, GI145693196, Length=779, Percent_Identity=30.1668806161746, Blast_Score=281, Evalue=1e-76,
Organism=Escherichia coli, GI1787231, Length=763, Percent_Identity=30.5373525557012, Blast_Score=268, Evalue=1e-72,
Organism=Escherichia coli, GI87081994, Length=856, Percent_Identity=28.3878504672897, Blast_Score=252, Evalue=6e-68,
Organism=Escherichia coli, GI3868721, Length=787, Percent_Identity=23.5069885641677, Blast_Score=125, Evalue=8e-30,
Organism=Escherichia coli, GI3868720, Length=456, Percent_Identity=25.8771929824561, Blast_Score=106, Evalue=5e-24,
Organism=Escherichia coli, GI3868719, Length=462, Percent_Identity=24.4588744588745, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1787741, Length=437, Percent_Identity=25.1716247139588, Blast_Score=87, Evalue=5e-18,
Organism=Escherichia coli, GI1788534, Length=890, Percent_Identity=22.5842696629214, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011888
- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR006963
- InterPro:   IPR006655
- InterPro:   IPR006311 [H]

Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: 1.8.99.- [C]

Molecular weight: Translated: 90050; Mature: 89919

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS00932 MOLYBDOPTERIN_PROK_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGEKQQTGVSRRTLVKSAALGSLALAAGGVSLPFGMRTAAAAVQQAMRNEEDKIVWGAC
CCCCCCCCCCHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEE
SVNCGSRCALRLHVKDNEVWWVETDNTGDDVYGNHQVRACLRGRSIRRRINHPDRLNYPM
ECCCCCEEEEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH
KRVGRRGEGKFERISWQEALDTISASLKKTVEIYGNEAVYIHYSSGIVGGNITRSSPSAS
HHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHEEECCCEEEEEECCCEECCCCCCCCCCHH
PVKRLMNCYGGSLNQYGSYSTAQISCAMPYTYGSNDGNSTSDIENSKLVVMFGNNPAETR
HHHHHHHHHCCCCHHCCCCCCEEEEEEECEEECCCCCCCCCCCCCCEEEEEECCCCHHCE
MSGGGITWFLEQARERSNARMIVIDPRYTDTAAGREDEWIPIRPGTDAALVAGIAWVLIN
ECCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHEEEEEEC
ENLVDQPFLDNYCIGYDEKTLPADAPPNGHYKAYILGQGEDGIAKTPQWASHITGIPADR
CCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCHHH
IIKLAREIGSVKPAYICQGWGPQRQANGEQTARAIAMFPILTGNVGIHGGNGGARESTYT
HHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHEEEEEEEECCEEEECCCCCCCCCEEE
ITIERLPVLENPVKTAISCFSWTDAIARGPEMTALRDGVRGKDKLDVPIKFLWNYAGNTL
EEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHEEHHCCCCE
INQHSDINKTHEILQDEAKCEMIVVIDNFMTSSAKYADILLPDLMTVEQEDIIPNDYAGN
ECCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCHHCCCCCCCCCC
MGYLIFIQPATTPKFERKPIYWVLSEIARRLGDDVYQRFTEGRTQAQWLQYLYAKMQARD
CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
PALPAYDELKKMGIYKRKDPNGHFVAYKKFREDPQANPLKTPSGKIEIYSSKLAHIASTW
CCCCCHHHHHHCCCEECCCCCCCEEEEHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHH
ELAEGDVISPLPIYTPTFEGWDDPKRSTFPLQLFGFHYKSRTHSSYGNIDVLQAACRQEV
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHH
WINPLDAQKRGIANGDKVRVFNDRGEVRLPAKVTPRILPGVSAMGQGAWHNADMAGDKID
CCCCCCHHHCCCCCCCEEEEECCCCCEEECCCCCCHHCCCCHHHCCCCCCCCCCCCCCCC
HGACINTLTTLRPSPLAKGNPQHTNLVEIEKI
CCHHHHHHHHCCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure 
PGEKQQTGVSRRTLVKSAALGSLALAAGGVSLPFGMRTAAAAVQQAMRNEEDKIVWGAC
CCCCCCCCCHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEE
SVNCGSRCALRLHVKDNEVWWVETDNTGDDVYGNHQVRACLRGRSIRRRINHPDRLNYPM
ECCCCCEEEEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH
KRVGRRGEGKFERISWQEALDTISASLKKTVEIYGNEAVYIHYSSGIVGGNITRSSPSAS
HHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHEEECCCEEEEEECCCEECCCCCCCCCCHH
PVKRLMNCYGGSLNQYGSYSTAQISCAMPYTYGSNDGNSTSDIENSKLVVMFGNNPAETR
HHHHHHHHHCCCCHHCCCCCCEEEEEEECEEECCCCCCCCCCCCCCEEEEEECCCCHHCE
MSGGGITWFLEQARERSNARMIVIDPRYTDTAAGREDEWIPIRPGTDAALVAGIAWVLIN
ECCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHEEEEEEC
ENLVDQPFLDNYCIGYDEKTLPADAPPNGHYKAYILGQGEDGIAKTPQWASHITGIPADR
CCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCHHH
IIKLAREIGSVKPAYICQGWGPQRQANGEQTARAIAMFPILTGNVGIHGGNGGARESTYT
HHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHEEEEEEEECCEEEECCCCCCCCCEEE
ITIERLPVLENPVKTAISCFSWTDAIARGPEMTALRDGVRGKDKLDVPIKFLWNYAGNTL
EEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHEEHHCCCCE
INQHSDINKTHEILQDEAKCEMIVVIDNFMTSSAKYADILLPDLMTVEQEDIIPNDYAGN
ECCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCHHCCCCCCCCCC
MGYLIFIQPATTPKFERKPIYWVLSEIARRLGDDVYQRFTEGRTQAQWLQYLYAKMQARD
CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
PALPAYDELKKMGIYKRKDPNGHFVAYKKFREDPQANPLKTPSGKIEIYSSKLAHIASTW
CCCCCHHHHHHCCCEECCCCCCCEEEEHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHH
ELAEGDVISPLPIYTPTFEGWDDPKRSTFPLQLFGFHYKSRTHSSYGNIDVLQAACRQEV
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHH
WINPLDAQKRGIANGDKVRVFNDRGEVRLPAKVTPRILPGVSAMGQGAWHNADMAGDKID
CCCCCCHHHCCCCCCCEEEEECCCCCEEECCCCCCHHCCCCHHHCCCCCCCCCCCCCCCC
HGACINTLTTLRPSPLAKGNPQHTNLVEIEKI
CCHHHHHHHHCCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: May Bind 4Fe-4S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]