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The map label for this gene is dmsA [H]

Identifier: 29141872

GI number: 29141872

Start: 1462847

End: 1465282

Strand: Reverse

Name: dmsA [H]

Synonym: t1419

Alternate gene names: 29141872

Gene position: 1465282-1462847 (Counterclockwise)

Preceding gene: 29141873

Following gene: 29141871

Centisome position: 30.58

GC content: 55.17

Gene sequence:

>2436_bases
ATGAAAATCACCAACCCTGAGGCATTAATGGCGGCCAGTATCAGCCGACGAAGCCTGGTGAAAACCTCCGCTATCGGTAG
CCTTGCGCTTGCCAGTAGCGCTTTCACCCTTCCGTTCTCCCGCATCGCCCACGCCGCAGCAGACCTCGCATCTGGCAATA
TGGCAGAAAAAGCGGTCTGGAGTTCATGTACCGTTAACTGCGGCAGCCGCTGCCTGCTGCGCCTGCACGTAAAAGATGAC
ACCGTATATTGGGTTGAATCAGATACCACGGGCAACGATGAATATGGCAACCATCAGGTACGCGCCTGCCTGCGCGGTCG
TTCTATTCGTCGCCGGATGAATCATCCCGATCGCCTGAAATATCCGATGAAACGCGTTGGTAAACGAGGAGAAGGCAAAT
TCGAACGTATCAGTTGGGATGAAGCGTTGGATACCATCGGCGATAACCTTAAACGCATCCTCAAGGACTACGGCAACGAA
GCGGTACATGTCCTTTACGGTACCGGCGTGGACGGCGGCAATATTACCAATTCTAACGTACCGTATCGCCTGATGAACGC
CTGCGGCGGCTATCTCAGCCGTTACGGTAGCTACAGCACCGCCCAAATCAGCGCGGCCATGAGCTATATGTTCGGCGGCA
ACGACGGCAACAGTCCGGATGATATCGCCAATACAAAACTGGTGGTGATGTTTGGCAATAACCCCGCGGAAACACGTATG
AGCGGCGGCGGCGTGACATACTATGTCGAACAGGCGCGCGAACGCTCCAACGCCCGGATGATCGTCATTGACCCGCGTTA
TAACGACACTGCTGCCGGCCGCGAAGACGAGTGGCTGCCGATTCGCCCAGGTACCGATGGCGCGCTGGCGGCGGCAATCG
GCTGGGTGCTGATTACCGAAGATCTTATTGATAAACCGTTTCTGGATAAATACTGCATCGGCTACGACGAAACCACTCTG
CCCGCCTCGGCCCCGCGTAACGCGCACTATAAAGCCTATATTTTGGGTCAGGGCGAAGACGGTATTGCTAAAACGCCGCA
ATGGGCCGCGCAGATTACCAGTATTCCGGCGGAAAAAATCATTCAACTGGCGCGGGAAATCGGCTCGGCGAAACCGGCTT
ACATTTGCCAGGGCTGGGGACCGCAACGCCACTCTAACGGGGAGCAGACCGCACGCGCAATCGCCATGTTGTCTGTACTC
ACCGGTAACGTCGGCATAAATGGCGGTAATTCCGGCGTGCGCGAAGGCACCTGGGATCTGGGCGTCGAATGGTTTCCTAT
GCTGGAGAACCCGGTAAAAACCCAGATTTCGGTCTTTACCTGGACCGACGCTATCGATCATGGCGCGGAAATGACCGCCA
CACGCGACGGCGTGCGGGGAAAAGACAAGCTCGACGTGCCGATCAAATTTTTGTGGTGCTACGCCAGTAATACGCTGATC
AATCAGCATGGCGATATCGCCCACACCCACGAGGTGCTTCAGGACGACAGTAAATGTGAAATGATCGTCGGCATCGAGCA
CTTTATGACCGCGTCGGCAAAATATTGCGACATTCTGCTGCCTGATTTAATGCCGACCGAGCAGGAAGATCTGATTTCCC
ACGAATCCGCAGGCAATATGGGCTATGTCATTCTTGGTCAGCCCGCCACCTCGCCGAAATTTGAAAGAAAGCCCATTTAC
TGGACGCTCAGTGAAGTGGCTAAACGGCTTGGTCCGGACGTATACCAGACCTTCACAGAAGGCCGCACGCAGCATGAGTG
GGTCAAATACCTGCACGCAAAAACCAAAGCGCGTAACCCGGAAATGCCGGATTACGAAGAGATGAAACAGACAGGGATTT
TCAAGAAAAAATGCCCGGAGGAGCACTACGTCGCTTTCCGCTCATTCCGCGAAGACCCTGCCGCCAACCCACTGAAAACG
CCGTCCGGTAAAATCGAAATCTATTCCGAGCGTCTGGCAACCCTCGCCAACACGTGGGAGCTGAAGAAAGATGAGATTAT
CCATCCTTTACCCGCCTATACGCCAGGCTTTGACGGTTGGGACGATCCGCTTCGTCAGCGCTACCCGCTACAGCTAACCG
GCTTCCACTATAAAGCGCGTACCCACTCCAGCTACGGCAATATCGACGTCCTGCAACAGGCGTGTCCGCAGGAGATCTGG
ATCAACCCGATTGATGCGCAAGCGCGCGGCATTCAGCACGGCGACACCGTGCGGGTCTTTAACCAGAATGGAGAGATGCT
CATTCCGGCAAAAGTCACGCCGCGCATATTGCCTGGCGTCACCGCTATCGGCCAGGGCGCCTGGTTAAATGCCGACATGT
TTGGCGACAAAGTCGATCGCGGCGGCTCCATTAACATTCTGACGTCGCACCGGCCTTCCCCACTGGCGAAAGGTAATCCG
TCACACAGTAATCTTGTTCAGGTTGAAAAGGCGTAA

Upstream 100 bases:

>100_bases
CCGCCTGCTCCGGGGCGTTTTTACGCGCCCGGAGCTCCCCGTTTTGCGAACACAACGACATTTAAAACTCTTTTTTGGAT
GAGCATAGTGAGGAGCTGTT

Downstream 100 bases:

>100_bases
GGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTCCAGCCGTTGCACCGGTTGCAAAACCTGCGAACTGGCCT
GCAAGGACTACAAAGATCTC

Product: dimethyl sulfoxide reductase subunit

Products: NA

Alternate protein names: DMSO reductase [H]

Number of amino acids: Translated: 811; Mature: 811

Protein sequence:

>811_residues
MKITNPEALMAASISRRSLVKTSAIGSLALASSAFTLPFSRIAHAAADLASGNMAEKAVWSSCTVNCGSRCLLRLHVKDD
TVYWVESDTTGNDEYGNHQVRACLRGRSIRRRMNHPDRLKYPMKRVGKRGEGKFERISWDEALDTIGDNLKRILKDYGNE
AVHVLYGTGVDGGNITNSNVPYRLMNACGGYLSRYGSYSTAQISAAMSYMFGGNDGNSPDDIANTKLVVMFGNNPAETRM
SGGGVTYYVEQARERSNARMIVIDPRYNDTAAGREDEWLPIRPGTDGALAAAIGWVLITEDLIDKPFLDKYCIGYDETTL
PASAPRNAHYKAYILGQGEDGIAKTPQWAAQITSIPAEKIIQLAREIGSAKPAYICQGWGPQRHSNGEQTARAIAMLSVL
TGNVGINGGNSGVREGTWDLGVEWFPMLENPVKTQISVFTWTDAIDHGAEMTATRDGVRGKDKLDVPIKFLWCYASNTLI
NQHGDIAHTHEVLQDDSKCEMIVGIEHFMTASAKYCDILLPDLMPTEQEDLISHESAGNMGYVILGQPATSPKFERKPIY
WTLSEVAKRLGPDVYQTFTEGRTQHEWVKYLHAKTKARNPEMPDYEEMKQTGIFKKKCPEEHYVAFRSFREDPAANPLKT
PSGKIEIYSERLATLANTWELKKDEIIHPLPAYTPGFDGWDDPLRQRYPLQLTGFHYKARTHSSYGNIDVLQQACPQEIW
INPIDAQARGIQHGDTVRVFNQNGEMLIPAKVTPRILPGVTAIGQGAWLNADMFGDKVDRGGSINILTSHRPSPLAKGNP
SHSNLVQVEKA

Sequences:

>Translated_811_residues
MKITNPEALMAASISRRSLVKTSAIGSLALASSAFTLPFSRIAHAAADLASGNMAEKAVWSSCTVNCGSRCLLRLHVKDD
TVYWVESDTTGNDEYGNHQVRACLRGRSIRRRMNHPDRLKYPMKRVGKRGEGKFERISWDEALDTIGDNLKRILKDYGNE
AVHVLYGTGVDGGNITNSNVPYRLMNACGGYLSRYGSYSTAQISAAMSYMFGGNDGNSPDDIANTKLVVMFGNNPAETRM
SGGGVTYYVEQARERSNARMIVIDPRYNDTAAGREDEWLPIRPGTDGALAAAIGWVLITEDLIDKPFLDKYCIGYDETTL
PASAPRNAHYKAYILGQGEDGIAKTPQWAAQITSIPAEKIIQLAREIGSAKPAYICQGWGPQRHSNGEQTARAIAMLSVL
TGNVGINGGNSGVREGTWDLGVEWFPMLENPVKTQISVFTWTDAIDHGAEMTATRDGVRGKDKLDVPIKFLWCYASNTLI
NQHGDIAHTHEVLQDDSKCEMIVGIEHFMTASAKYCDILLPDLMPTEQEDLISHESAGNMGYVILGQPATSPKFERKPIY
WTLSEVAKRLGPDVYQTFTEGRTQHEWVKYLHAKTKARNPEMPDYEEMKQTGIFKKKCPEEHYVAFRSFREDPAANPLKT
PSGKIEIYSERLATLANTWELKKDEIIHPLPAYTPGFDGWDDPLRQRYPLQLTGFHYKARTHSSYGNIDVLQQACPQEIW
INPIDAQARGIQHGDTVRVFNQNGEMLIPAKVTPRILPGVTAIGQGAWLNADMFGDKVDRGGSINILTSHRPSPLAKGNP
SHSNLVQVEKA
>Mature_811_residues
MKITNPEALMAASISRRSLVKTSAIGSLALASSAFTLPFSRIAHAAADLASGNMAEKAVWSSCTVNCGSRCLLRLHVKDD
TVYWVESDTTGNDEYGNHQVRACLRGRSIRRRMNHPDRLKYPMKRVGKRGEGKFERISWDEALDTIGDNLKRILKDYGNE
AVHVLYGTGVDGGNITNSNVPYRLMNACGGYLSRYGSYSTAQISAAMSYMFGGNDGNSPDDIANTKLVVMFGNNPAETRM
SGGGVTYYVEQARERSNARMIVIDPRYNDTAAGREDEWLPIRPGTDGALAAAIGWVLITEDLIDKPFLDKYCIGYDETTL
PASAPRNAHYKAYILGQGEDGIAKTPQWAAQITSIPAEKIIQLAREIGSAKPAYICQGWGPQRHSNGEQTARAIAMLSVL
TGNVGINGGNSGVREGTWDLGVEWFPMLENPVKTQISVFTWTDAIDHGAEMTATRDGVRGKDKLDVPIKFLWCYASNTLI
NQHGDIAHTHEVLQDDSKCEMIVGIEHFMTASAKYCDILLPDLMPTEQEDLISHESAGNMGYVILGQPATSPKFERKPIY
WTLSEVAKRLGPDVYQTFTEGRTQHEWVKYLHAKTKARNPEMPDYEEMKQTGIFKKKCPEEHYVAFRSFREDPAANPLKT
PSGKIEIYSERLATLANTWELKKDEIIHPLPAYTPGFDGWDDPLRQRYPLQLTGFHYKARTHSSYGNIDVLQQACPQEIW
INPIDAQARGIQHGDTVRVFNQNGEMLIPAKVTPRILPGVTAIGQGAWLNADMFGDKVDRGGSINILTSHRPSPLAKGNP
SHSNLVQVEKA

Specific function: Terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI171474008, Length=810, Percent_Identity=91.6049382716049, Blast_Score=1570, Evalue=0.0,
Organism=Escherichia coli, GI1787870, Length=802, Percent_Identity=71.072319201995, Blast_Score=1226, Evalue=0.0,
Organism=Escherichia coli, GI87081797, Length=818, Percent_Identity=64.9144254278729, Blast_Score=1114, Evalue=0.0,
Organism=Escherichia coli, GI145693196, Length=753, Percent_Identity=30.2788844621514, Blast_Score=279, Evalue=4e-76,
Organism=Escherichia coli, GI1787231, Length=750, Percent_Identity=28.6666666666667, Blast_Score=251, Evalue=1e-67,
Organism=Escherichia coli, GI87081994, Length=849, Percent_Identity=28.9752650176678, Blast_Score=246, Evalue=6e-66,
Organism=Escherichia coli, GI3868721, Length=779, Percent_Identity=25.0320924261874, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI3868720, Length=459, Percent_Identity=23.5294117647059, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI3868719, Length=461, Percent_Identity=22.7765726681128, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011888
- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR006963
- InterPro:   IPR006655
- InterPro:   IPR006311 [H]

Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: 1.8.99.- [C]

Molecular weight: Translated: 89819; Mature: 89819

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: PS00551 MOLYBDOPTERIN_PROK_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITNPEALMAASISRRSLVKTSAIGSLALASSAFTLPFSRIAHAAADLASGNMAEKAVW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
SSCTVNCGSRCLLRLHVKDDTVYWVESDTTGNDEYGNHQVRACLRGRSIRRRMNHPDRLK
HHCCCCCCCEEEEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHC
YPMKRVGKRGEGKFERISWDEALDTIGDNLKRILKDYGNEAVHVLYGTGVDGGNITNSNV
CHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCC
PYRLMNACGGYLSRYGSYSTAQISAAMSYMFGGNDGNSPDDIANTKLVVMFGNNPAETRM
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCEEEEEECCCCHHHEE
SGGGVTYYVEQARERSNARMIVIDPRYNDTAAGREDEWLPIRPGTDGALAAAIGWVLITE
CCCCEEEEEHHHHHHCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHEEH
DLIDKPFLDKYCIGYDETTLPASAPRNAHYKAYILGQGEDGIAKTPQWAAQITSIPAEKI
HHHCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCHHHH
IQLAREIGSAKPAYICQGWGPQRHSNGEQTARAIAMLSVLTGNVGINGGNSGVREGTWDL
HHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHC
GVEWFPMLENPVKTQISVFTWTDAIDHGAEMTATRDGVRGKDKLDVPIKFLWCYASNTLI
CCEEEECCCCCCCCEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEE
NQHGDIAHTHEVLQDDSKCEMIVGIEHFMTASAKYCDILLPDLMPTEQEDLISHESAGNM
CCCCCHHHHHHHHCCCCCCEEEEEHHHHHHCCCCHHEEECCCCCCCCHHHHHHHCCCCCE
GYVILGQPATSPKFERKPIYWTLSEVAKRLGPDVYQTFTEGRTQHEWVKYLHAKTKARNP
EEEEECCCCCCCCCCCCCEEEEHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHCCCC
EMPDYEEMKQTGIFKKKCPEEHYVAFRSFREDPAANPLKTPSGKIEIYSERLATLANTWE
CCCCHHHHHHCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCC
LKKDEIIHPLPAYTPGFDGWDDPLRQRYPLQLTGFHYKARTHSSYGNIDVLQQACPQEIW
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEECEEEEEECCCCCCCHHHHHHHCCHHHC
INPIDAQARGIQHGDTVRVFNQNGEMLIPAKVTPRILPGVTAIGQGAWLNADMFGDKVDR
CCCCCHHHCCCCCCCEEEEECCCCCEEEECCCCCCHHCCCCCCCCCCEEEHHHCCCCCCC
GGSINILTSHRPSPLAKGNPSHSNLVQVEKA
CCEEEEEECCCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MKITNPEALMAASISRRSLVKTSAIGSLALASSAFTLPFSRIAHAAADLASGNMAEKAVW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
SSCTVNCGSRCLLRLHVKDDTVYWVESDTTGNDEYGNHQVRACLRGRSIRRRMNHPDRLK
HHCCCCCCCEEEEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHC
YPMKRVGKRGEGKFERISWDEALDTIGDNLKRILKDYGNEAVHVLYGTGVDGGNITNSNV
CHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCC
PYRLMNACGGYLSRYGSYSTAQISAAMSYMFGGNDGNSPDDIANTKLVVMFGNNPAETRM
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCEEEEEECCCCHHHEE
SGGGVTYYVEQARERSNARMIVIDPRYNDTAAGREDEWLPIRPGTDGALAAAIGWVLITE
CCCCEEEEEHHHHHHCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHEEH
DLIDKPFLDKYCIGYDETTLPASAPRNAHYKAYILGQGEDGIAKTPQWAAQITSIPAEKI
HHHCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCHHHH
IQLAREIGSAKPAYICQGWGPQRHSNGEQTARAIAMLSVLTGNVGINGGNSGVREGTWDL
HHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHC
GVEWFPMLENPVKTQISVFTWTDAIDHGAEMTATRDGVRGKDKLDVPIKFLWCYASNTLI
CCEEEECCCCCCCCEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEE
NQHGDIAHTHEVLQDDSKCEMIVGIEHFMTASAKYCDILLPDLMPTEQEDLISHESAGNM
CCCCCHHHHHHHHCCCCCCEEEEEHHHHHHCCCCHHEEECCCCCCCCHHHHHHHCCCCCE
GYVILGQPATSPKFERKPIYWTLSEVAKRLGPDVYQTFTEGRTQHEWVKYLHAKTKARNP
EEEEECCCCCCCCCCCCCEEEEHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHCCCC
EMPDYEEMKQTGIFKKKCPEEHYVAFRSFREDPAANPLKTPSGKIEIYSERLATLANTWE
CCCCHHHHHHCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCC
LKKDEIIHPLPAYTPGFDGWDDPLRQRYPLQLTGFHYKARTHSSYGNIDVLQQACPQEIW
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEECEEEEEECCCCCCCHHHHHHHCCHHHC
INPIDAQARGIQHGDTVRVFNQNGEMLIPAKVTPRILPGVTAIGQGAWLNADMFGDKVDR
CCCCCHHHCCCCCCCEEEEECCCCCEEEECCCCCCHHCCCCCCCCCCEEEHHHCCCCCCC
GGSINILTSHRPSPLAKGNPSHSNLVQVEKA
CCEEEEEECCCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: May Bind 4Fe-4S Cluster. [C]

Metal ions: Fe; Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]