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The map label for this gene is dmsC [H]

Identifier: 29141870

GI number: 29141870

Start: 1461363

End: 1462217

Strand: Reverse

Name: dmsC [H]

Synonym: t1417

Alternate gene names: 29141870

Gene position: 1462217-1461363 (Counterclockwise)

Preceding gene: 29141871

Following gene: 29141869

Centisome position: 30.51

GC content: 56.84

Gene sequence:

>855_bases
ATGGGAAGTGGATGGCATGAATGGCCGCTGGTCCTGTTTACGGTGCTGGGTCAATGTGTGGCCGGGGCGCTGATCGTGAG
TGGATATGGCTGGTTAACCACCAAAGACGATGTGGCAAAACAACGCATCGTGCGCAGCATGTTTTTTCTGTGGCTGGTGA
TGGGACTGGGATTCCTCGCGTCGATTATGCATCTCGGCTTGCCGATGCGCGCGTTTAACTCGCTTAACCGCGTAGGCGCT
TCCGCACTGAGTAATGAAATCGCCGCAGGATCGGTGTTCTTTGCCGTAGGCGGCATCTGGTGGCTGGTGGCGGTACTCGG
TAAAATGCCCCCGGCGCTGGGTAAAGTGTGGCTGCTGGTCAGTATGGCGCTCGGCGTTGCATTCATCTGGGCAATGACGC
TCGTTTATCAGATAGATACCGTGCCAACCTGGTATAATGGCTACACCACGCTGGCCTTTTTCCTCACGGCATTCCTGTGC
GGTCCGGTGTTTGCGGCGCTACTGCTACGCATCGCGCGCGTCCCATTTTGCAGCGTGACGTTTGCCAGTATTAGCGGCCT
GGCGTTGGTGGTGTGCGTGGCGGTCATCGTACTACAGGGACTGTCCCTCTCAGCCATTCACAGTTCCGTGCAACAGGCCA
GCCATCTCGCACCGGATTACGGTATGCTACAGGTCTGGCGCATTGTCTTGCTTGCTGCCGGATTAGGTTGCTGGCTATGT
CCACTAATCCGTCGCCGCGAACCGCATACCGTTGGTTTGCTGCTCGGTGTCGTACTGGTGCTGGCGGGCGAAATTATTGG
CCGCGGACTTTTTTATGGCCTGCATATGACCGTAGGTATGGCCGTCGCAGGTTAA

Upstream 100 bases:

>100_bases
ACGCATTTCACGAAGCCGAATATTGTGATTAAACCCAACGCCAACAGCCGCCCGACCGGGGACACCACCGGTTATCTGGC
CAATCCGAAGGAGGTATAAG

Downstream 100 bases:

>100_bases
TTTATGCGTGCGGGGCGACCCGCACCTTTCGGGATTGTTTGAATGACCACTTTTTTACAACGTGATGATTTTGCAGTAAC
GGCGCGTGTTCTTGGCGCGT

Product: dimethyl sulfoxide reductase subunit

Products: NA

Alternate protein names: DMSO reductase anchor subunit ynfH [H]

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MGSGWHEWPLVLFTVLGQCVAGALIVSGYGWLTTKDDVAKQRIVRSMFFLWLVMGLGFLASIMHLGLPMRAFNSLNRVGA
SALSNEIAAGSVFFAVGGIWWLVAVLGKMPPALGKVWLLVSMALGVAFIWAMTLVYQIDTVPTWYNGYTTLAFFLTAFLC
GPVFAALLLRIARVPFCSVTFASISGLALVVCVAVIVLQGLSLSAIHSSVQQASHLAPDYGMLQVWRIVLLAAGLGCWLC
PLIRRREPHTVGLLLGVVLVLAGEIIGRGLFYGLHMTVGMAVAG

Sequences:

>Translated_284_residues
MGSGWHEWPLVLFTVLGQCVAGALIVSGYGWLTTKDDVAKQRIVRSMFFLWLVMGLGFLASIMHLGLPMRAFNSLNRVGA
SALSNEIAAGSVFFAVGGIWWLVAVLGKMPPALGKVWLLVSMALGVAFIWAMTLVYQIDTVPTWYNGYTTLAFFLTAFLC
GPVFAALLLRIARVPFCSVTFASISGLALVVCVAVIVLQGLSLSAIHSSVQQASHLAPDYGMLQVWRIVLLAAGLGCWLC
PLIRRREPHTVGLLLGVVLVLAGEIIGRGLFYGLHMTVGMAVAG
>Mature_283_residues
GSGWHEWPLVLFTVLGQCVAGALIVSGYGWLTTKDDVAKQRIVRSMFFLWLVMGLGFLASIMHLGLPMRAFNSLNRVGAS
ALSNEIAAGSVFFAVGGIWWLVAVLGKMPPALGKVWLLVSMALGVAFIWAMTLVYQIDTVPTWYNGYTTLAFFLTAFLCG
PVFAALLLRIARVPFCSVTFASISGLALVVCVAVIVLQGLSLSAIHSSVQQASHLAPDYGMLQVWRIVLLAAGLGCWLCP
LIRRREPHTVGLLLGVVLVLAGEIIGRGLFYGLHMTVGMAVAG

Specific function: Terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. The C subunit anchors the other two subunits to the membrane and stabilize the catalytic subunits [H]

COG id: COG3302

COG function: function code R; DMSO reductase anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli dmsC [H]

Homologues:

Organism=Escherichia coli, GI1787873, Length=284, Percent_Identity=76.056338028169, Blast_Score=410, Evalue=1e-116,
Organism=Escherichia coli, GI1787123, Length=288, Percent_Identity=59.375, Blast_Score=296, Evalue=1e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007059 [H]

Pfam domain/function: PF04976 DmsC [H]

EC number: NA

Molecular weight: Translated: 30496; Mature: 30365

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GSGWHEWPLVLFTVLGQCVAGALIVSGYGWLTTKDDVAKQRIVRSMFFLWLVMGLGFLA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SIMHLGLPMRAFNSLNRVGASALSNEIAAGSVFFAVGGIWWLVAVLGKMPPALGKVWLLV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SMALGVAFIWAMTLVYQIDTVPTWYNGYTTLAFFLTAFLCGPVFAALLLRIARVPFCSVT
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
FASISGLALVVCVAVIVLQGLSLSAIHSSVQQASHLAPDYGMLQVWRIVLLAAGLGCWLC
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
PLIRRREPHTVGLLLGVVLVLAGEIIGRGLFYGLHMTVGMAVAG
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]