Click here to switch to the map view.

The map label for this gene is tfaE [H]

Identifier: 29141804

GI number: 29141804

Start: 1409849

End: 1410466

Strand: Direct

Name: tfaE [H]

Synonym: t1349

Alternate gene names: 29141804

Gene position: 1409849-1410466 (Clockwise)

Preceding gene: 29141801

Following gene: 29141836

Centisome position: 29.42

GC content: 50.32

Gene sequence:

>618_bases
ATGAATAATGCTGCTGCAGTACTTGATCAGAATGGTATCGCTATAACTGCAGGCGATATTACCGTTTATAACTACGATGC
TGAAAACCGTGAATATCTCTCTGCCACTGTTGAGTATCTCGCTTATGGTGTTGGAATTCCGGCTCACTCATGCATTGACG
CGCCACCAGAAAAACGCCCCGGCTTCGCTGTCTGTCGTGATACCGACCAGAACATCTGGAAATATGTTCCAGACCACAGA
GGCGAAACGGTTTACAGCACAGAGAATGGTAACGCTGTGCAAATCACACAACCGGGAGATTACCCTCCTGATACGACGGT
GAAACAGCCAGCTACTATCTATGATGTCTGGGATGGTGAGACCTGGGTGACAGATGCGGGACGACAGCACGCAGCAGAAC
TGGAAGCTGCCGGAGCGCATCGTCAGCAACTTGAGGAACAGGCAATGGCATCTGTTGAGCTTATAAATCTCAAACTACGA
GCCGGACGCCGATTGACGCCCCAGGAGACGGAAAAACTAAACGCCGTGCTTGATTTCATAGATGTGCTTAATGCGACTGA
CATCAGCACTGCACCGGATATCAACTGGCCGGAAATGCCTCTGGCAGCAGCCAGTTGA

Upstream 100 bases:

>100_bases
GCACTCGTGGTGTTTATAGATTAGGTGCCAACGGAGGGAATACAGGAACGGAAAACCGCCCCCGTAATATTGCGTTTAAC
TATATTGTAAGGGCTACTTA

Downstream 100 bases:

>100_bases
ATATAACTAAGCCGCCCTCACGATATAGTTAAATGCAATATTGCGGGGGCGGGTTTCACTACCACCTGTGTTACCAATAC
TTCCTCGTGAATGAAGCGTT

Product: bacteriophage tail fiber assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MNNAAAVLDQNGIAITAGDITVYNYDAENREYLSATVEYLAYGVGIPAHSCIDAPPEKRPGFAVCRDTDQNIWKYVPDHR
GETVYSTENGNAVQITQPGDYPPDTTVKQPATIYDVWDGETWVTDAGRQHAAELEAAGAHRQQLEEQAMASVELINLKLR
AGRRLTPQETEKLNAVLDFIDVLNATDISTAPDINWPEMPLAAAS

Sequences:

>Translated_205_residues
MNNAAAVLDQNGIAITAGDITVYNYDAENREYLSATVEYLAYGVGIPAHSCIDAPPEKRPGFAVCRDTDQNIWKYVPDHR
GETVYSTENGNAVQITQPGDYPPDTTVKQPATIYDVWDGETWVTDAGRQHAAELEAAGAHRQQLEEQAMASVELINLKLR
AGRRLTPQETEKLNAVLDFIDVLNATDISTAPDINWPEMPLAAAS
>Mature_205_residues
MNNAAAVLDQNGIAITAGDITVYNYDAENREYLSATVEYLAYGVGIPAHSCIDAPPEKRPGFAVCRDTDQNIWKYVPDHR
GETVYSTENGNAVQITQPGDYPPDTTVKQPATIYDVWDGETWVTDAGRQHAAELEAAGAHRQQLEEQAMASVELINLKLR
AGRRLTPQETEKLNAVLDFIDVLNATDISTAPDINWPEMPLAAAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tfa family [H]

Homologues:

Organism=Escherichia coli, GI1787402, Length=197, Percent_Identity=60.4060913705584, Blast_Score=252, Evalue=1e-68,
Organism=Escherichia coli, GI1787637, Length=182, Percent_Identity=32.4175824175824, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI2367120, Length=182, Percent_Identity=31.8681318681319, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003458 [H]

Pfam domain/function: PF02413 Caudo_TAP [H]

EC number: NA

Molecular weight: Translated: 22444; Mature: 22444

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNAAAVLDQNGIAITAGDITVYNYDAENREYLSATVEYLAYGVGIPAHSCIDAPPEKRP
CCCCCEEEECCCEEEEECCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCC
GFAVCRDTDQNIWKYVPDHRGETVYSTENGNAVQITQPGDYPPDTTVKQPATIYDVWDGE
CEEEEECCCCHHHHCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCCC
TWVTDAGRQHAAELEAAGAHRQQLEEQAMASVELINLKLRAGRRLTPQETEKLNAVLDFI
EEEECCCHHHHHHHHHCCHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHH
DVLNATDISTAPDINWPEMPLAAAS
HHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNNAAAVLDQNGIAITAGDITVYNYDAENREYLSATVEYLAYGVGIPAHSCIDAPPEKRP
CCCCCEEEECCCEEEEECCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCC
GFAVCRDTDQNIWKYVPDHRGETVYSTENGNAVQITQPGDYPPDTTVKQPATIYDVWDGE
CEEEEECCCCHHHHCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCCC
TWVTDAGRQHAAELEAAGAHRQQLEEQAMASVELINLKLRAGRRLTPQETEKLNAVLDFI
EEEECCCHHHHHHHHHCCHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHH
DVLNATDISTAPDINWPEMPLAAAS
HHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3894006; 9278503 [H]