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The map label for this gene is ydhA [H]

Identifier: 29141774

GI number: 29141774

Start: 1376722

End: 1376976

Strand: Direct

Name: ydhA [H]

Synonym: t1315

Alternate gene names: 29141774

Gene position: 1376722-1376976 (Clockwise)

Preceding gene: 29141773

Following gene: 29141775

Centisome position: 28.73

GC content: 45.49

Gene sequence:

>255_bases
ATGCCTATGAAAAAGATCGCAATAATGTTTTTACCTGTGCTGCTGACCGGCTGTAGCGTTTATCAACAATTTGTTGAACG
TATGCAAACGGATACGCTGGAATATCAGTGTGATGAGAAGCCGCTTACCGTTAAAGCCAATAACCCGCGTGAAGAGGTCA
GTTTTGTTTATGACAATAAGCTGCTGACCCTGAAGCAAGGAATCTCGGCCTCGGGCGCGCGTTATACCGACGGGATTTAT
GTTTTCTGGTCGTAA

Upstream 100 bases:

>100_bases
AACTCAGAGTTAACTGAATTTTTCCCGGACCCTATATCGGTAAACTAGCAAGGTCAGGAAGGGGCGTTTGCCCTTCCAGA
AGCAGGAGAGCTTTCGGGAT

Downstream 100 bases:

>100_bases
GGCGAGAGCGCCACGGTCTATAAACGAGACAGAATTGTGCTTAATAACTGTCAGTTACAAAATCCGAAGCGTTGAGATTT
TCAGTATGGGGGCGCACAAT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MPMKKIAIMFLPVLLTGCSVYQQFVERMQTDTLEYQCDEKPLTVKANNPREEVSFVYDNKLLTLKQGISASGARYTDGIY
VFWS

Sequences:

>Translated_84_residues
MPMKKIAIMFLPVLLTGCSVYQQFVERMQTDTLEYQCDEKPLTVKANNPREEVSFVYDNKLLTLKQGISASGARYTDGIY
VFWS
>Mature_83_residues
PMKKIAIMFLPVLLTGCSVYQQFVERMQTDTLEYQCDEKPLTVKANNPREEVSFVYDNKLLTLKQGISASGARYTDGIYV
FWS

Specific function: Specifically inhibits C-type lysozymes [H]

COG id: COG3895

COG function: function code R; Predicted periplasmic protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Note=Anchored to the periplasmic side [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mliC family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081949, Length=84, Percent_Identity=83.3333333333333, Blast_Score=137, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018660 [H]

Pfam domain/function: PF09864 DUF2091 [H]

EC number: NA

Molecular weight: Translated: 9661; Mature: 9530

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMKKIAIMFLPVLLTGCSVYQQFVERMQTDTLEYQCDEKPLTVKANNPREEVSFVYDNK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCHHHEEEEECCE
LLTLKQGISASGARYTDGIYVFWS
EEEEECCCCCCCCEECCCEEEEEC
>Mature Secondary Structure 
PMKKIAIMFLPVLLTGCSVYQQFVERMQTDTLEYQCDEKPLTVKANNPREEVSFVYDNK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCHHHEEEEECCE
LLTLKQGISASGARYTDGIYVFWS
EEEEECCCCCCCCEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1356963 [H]