| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is ykgH [C]
Identifier: 29141157
GI number: 29141157
Start: 728721
End: 729386
Strand: Direct
Name: ykgH [C]
Synonym: t0647
Alternate gene names: 29141157
Gene position: 728721-729386 (Clockwise)
Preceding gene: 29141156
Following gene: 29141159
Centisome position: 15.21
GC content: 38.74
Gene sequence:
>666_bases ATGCGGGGAGAAAATAGTGAAATTGATTTAGTCGACGTTTCCTTATTCCTTATAAGAAAATGGCTAAGTATCGTGATCGC TACCTTTATTTTTGTCGCCATTGGCTATGTTTTTGTGAGCGTGCATCATGATACAAAGGTTGTGAGTATTACAATCAAAC CTAATCTGGATACGCCTGCTACCTATGCGTTATGTGGCTATGCTAATGATATTCAATGTAAAACAACGGTTATCCTTAAC CAGTTTAGCCGTTTCTTGCCTGCGGAATATAAAAATAAAATAAGTTTTGACGCGAAAAATCAGCTTGTCCTTTTTAAGGC GCAGGGGAGGGAAGAAAGCGTCAATAATATTATTTCCACCCTGAAAAATAGCGTCGATAAAATGGCAGCATGGTATATCG ATGATGGTGACATTAAACGTTATAGCGTGCATAAAAATATGTTACAAACGGAAACATATACAAAGCTATCCTTGTTGTCG GAGGCGGTTAAAAATAATGCTAACATTGAAGTGATAGATGTTGCTGTTACACCAAAATATAAGATGCGGCTGGTGTTGGT CCTTTGCGGGCTGATGGGCGTAATTTTCTCAATAACCGGTCTCTTATGTAAGAGGGCGCTAACAGAATATCGTATTGAGA AAAAGACAATGAATGACCGCGCATGA
Upstream 100 bases:
>100_bases AAATATACGTTCGCAGCCAGGGCGTTTATTTTTACGCTGGTGTTGCTTTTTGTTATTTCAGTATTCGGGTTGACTATTAG CGTTTTAAAAGGGATGTGAA
Downstream 100 bases:
>100_bases ACATCGCGCAGAAATAAATTCTGCGCTGAAATGTGTCGAAGAGTAAAAGTATCAGGCTTGCAAGTTAAACATCTTTAATA CGCGCCAGGCAGAACATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MRGENSEIDLVDVSLFLIRKWLSIVIATFIFVAIGYVFVSVHHDTKVVSITIKPNLDTPATYALCGYANDIQCKTTVILN QFSRFLPAEYKNKISFDAKNQLVLFKAQGREESVNNIISTLKNSVDKMAAWYIDDGDIKRYSVHKNMLQTETYTKLSLLS EAVKNNANIEVIDVAVTPKYKMRLVLVLCGLMGVIFSITGLLCKRALTEYRIEKKTMNDRA
Sequences:
>Translated_221_residues MRGENSEIDLVDVSLFLIRKWLSIVIATFIFVAIGYVFVSVHHDTKVVSITIKPNLDTPATYALCGYANDIQCKTTVILN QFSRFLPAEYKNKISFDAKNQLVLFKAQGREESVNNIISTLKNSVDKMAAWYIDDGDIKRYSVHKNMLQTETYTKLSLLS EAVKNNANIEVIDVAVTPKYKMRLVLVLCGLMGVIFSITGLLCKRALTEYRIEKKTMNDRA >Mature_221_residues MRGENSEIDLVDVSLFLIRKWLSIVIATFIFVAIGYVFVSVHHDTKVVSITIKPNLDTPATYALCGYANDIQCKTTVILN QFSRFLPAEYKNKISFDAKNQLVLFKAQGREESVNNIISTLKNSVDKMAAWYIDDGDIKRYSVHKNMLQTETYTKLSLLS EAVKNNANIEVIDVAVTPKYKMRLVLVLCGLMGVIFSITGLLCKRALTEYRIEKKTMNDRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25028; Mature: 25028
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGENSEIDLVDVSLFLIRKWLSIVIATFIFVAIGYVFVSVHHDTKVVSITIKPNLDTPA CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEEECCCCCCC TYALCGYANDIQCKTTVILNQFSRFLPAEYKNKISFDAKNQLVLFKAQGREESVNNIIST CEEEECCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHH LKNSVDKMAAWYIDDGDIKRYSVHKNMLQTETYTKLSLLSEAVKNNANIEVIDVAVTPKY HHHHHHHHHEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCH KMRLVLVLCGLMGVIFSITGLLCKRALTEYRIEKKTMNDRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRGENSEIDLVDVSLFLIRKWLSIVIATFIFVAIGYVFVSVHHDTKVVSITIKPNLDTPA CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEEECCCCCCC TYALCGYANDIQCKTTVILNQFSRFLPAEYKNKISFDAKNQLVLFKAQGREESVNNIIST CEEEECCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHH LKNSVDKMAAWYIDDGDIKRYSVHKNMLQTETYTKLSLLSEAVKNNANIEVIDVAVTPKY HHHHHHHHHEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCH KMRLVLVLCGLMGVIFSITGLLCKRALTEYRIEKKTMNDRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA