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The map label for this gene is nuoJ [H]

Identifier: 29141059

GI number: 29141059

Start: 619335

End: 619889

Strand: Direct

Name: nuoJ [H]

Synonym: t0544

Alternate gene names: 29141059

Gene position: 619335-619889 (Clockwise)

Preceding gene: 29141058

Following gene: 29141060

Centisome position: 12.92

GC content: 57.48

Gene sequence:

>555_bases
ATGGAATTCGCTTTTTATATCTGTGGCCTGATAGCCATCCTCGCGACCCTGCGAGTGATCACCCATACCAATCCGGTACA
CGCGCTGTTGTATCTGGTGATATCGCTACTGGCGATTTCCGGGGTGTTCTTTTCGCTGGGCGCTTACTTTGCCGGTGCGC
TGGAAATTATCGTCTACGCGGGTGCCATTATGGTGCTGTTTGTGTTCGTGGTGATGATGCTCAACCTCGGCGGCAGCGAA
ATCGAACAGGAACGCCAGTGGCTGAAGCCGCAGGTGTGGATTGGTCCGGCGGTTTTGTCGGCCATTATGCTGGCGGTTAT
TGTGTACGCCATTCTGGGCGTTAACGACCAGGGCATCGACGGCACGCCGATTAGCGCGAAAGCGGTGGGCATTACGCTGT
TCGGGCCTTATGTTCTGGCGGTCGAACTGGCGTCTATGCTGCTGCTGGCAGGCCTGGTGGTGGCGTTCCACGTCGGTCGT
GAAGAGCGTGCGGGCGAAGTGCTAAGCAACCGCGCCGATGACCGCGCGAAAAGAAAAACGGAGGAGCGCGCATGA

Upstream 100 bases:

>100_bases
CGGATGGCGGGTATGGCAATCGACGGCAAAGATAAAGGCGAAGCAGAGAACGAAGCCAAGCCTATCGACGTCAAGAGCCT
GTTACCGTAAGGAGAGGGCA

Downstream 100 bases:

>100_bases
TCCCCTTAACACACGGACTGATCCTCGCTGCGATTTTATTCGTCCTGGGTTTAACCGGTCTGGTTATCCGCCGCAATCTG
CTGTTTATGCTGATCGGGCT

Product: NADH dehydrogenase subunit J

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J; NUO10 [H]

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MEFAFYICGLIAILATLRVITHTNPVHALLYLVISLLAISGVFFSLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGGSE
IEQERQWLKPQVWIGPAVLSAIMLAVIVYAILGVNDQGIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGR
EERAGEVLSNRADDRAKRKTEERA

Sequences:

>Translated_184_residues
MEFAFYICGLIAILATLRVITHTNPVHALLYLVISLLAISGVFFSLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGGSE
IEQERQWLKPQVWIGPAVLSAIMLAVIVYAILGVNDQGIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGR
EERAGEVLSNRADDRAKRKTEERA
>Mature_184_residues
MEFAFYICGLIAILATLRVITHTNPVHALLYLVISLLAISGVFFSLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGGSE
IEQERQWLKPQVWIGPAVLSAIMLAVIVYAILGVNDQGIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGR
EERAGEVLSNRADDRAKRKTEERA

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=184, Percent_Identity=96.7391304347826, Blast_Score=355, Evalue=1e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 19850; Mature: 19850

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFAFYICGLIAILATLRVITHTNPVHALLYLVISLLAISGVFFSLGAYFAGALEIIVYA
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAVLSAIMLAVIVYAILGVNDQGID
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHCCCCCCCC
GTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERAGEVLSNRADDRAKRKT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHH
EERA
HCCC
>Mature Secondary Structure
MEFAFYICGLIAILATLRVITHTNPVHALLYLVISLLAISGVFFSLGAYFAGALEIIVYA
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAVLSAIMLAVIVYAILGVNDQGID
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHCCCCCCCC
GTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERAGEVLSNRADDRAKRKT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHH
EERA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]