| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
Click here to switch to the map view.
The map label for this gene is yfbS [H]
Identifier: 29141046
GI number: 29141046
Start: 603869
End: 605695
Strand: Direct
Name: yfbS [H]
Synonym: t0531
Alternate gene names: 29141046
Gene position: 603869-605695 (Clockwise)
Preceding gene: 161486813
Following gene: 29141049
Centisome position: 12.6
GC content: 55.83
Gene sequence:
>1827_bases GTGAACGGTGAATTGATTTGGGTTCTCTCTTTACTGGCGATTGCCGTCGTGTTGTTTGCGACGGGCAAAGTACGTATGGA TGCGGTGGCTTTATTCGTCATTGTTGCTTTTGTCCTTAGCGGTACCTTGACCCTTTCGGAAGCCTTCTCCGGCTTTAGCG ATCCGAATGTCATTCTTATCGCCGCCTTATTTATTATTGGCGACGGCCTCGTGCGCACCGGCGTTGCGACGGTGGTCGGT ACCTGGCTGGTTAAAATGGCGGGCAGCAGTGAAATCAAGATGCTGGTTTTACTGATGATCACCGTCGCCGGACTTGGTGC TTTCATGAGTTCAACCGGCGTGGTGGCGATTTTTATCCCCGTTGTTCTTAGCGTTTCTATGCATATGCAGACCTCGCCTT CGCGCCTGATGATGCCGCTGAGTTTTGCCGGGCTTATCAGCGGAATGATGACGCTGGTGGCGACGCCGCCGAACCTGGTG GTTAACAGTGAACTGCTGCGTGAAGGCCTGCACGGGTTCAACTTTTTTAGCGTGACGCCGCTGGGGGTAGTGGTGTTGGC GCTCGGCATTGTTTATATGCTGGTGATGCGCTTCATGCTAAAAGGCGATGCGCCCGGACAACAGGCCGGTAAGCGTCGCA CTTTCCGCGATCTTATCCGCGAGTACCGTCTGACGGGGCGCGCGCGTCGTCTGGCGATTCGCCCCGGTTCGCCGATGGTG GGACAGCGGCTGGACGACCTTAAACTGCGCGAACGTTACGGCGCCAATGTCATCGGCGTTGAACGCTGGCGGCGCTTTCG GCGGGTTATCGTCAATGTGAACGGCGTATCGGAGTTTCGCGCTCGCGACGTTCTGCTGATTGATATGTCGGCGGCGGAGG TTGACCTCAGAGAGTTCTGCGCCGAGCAACTGCTGGAACCGATGGTATTGCGTGGAGAATATTTTTCCGATCAGGCGTTG GATGTTGGCATGGCGGAAATTTCGCTTATTCCGAAGTCTGAACTGATAGGCAAGTCGGTGCGTGAAATCGCCTTCCGTAC ACGTTACGGGCTGAATGTGGTCGGCCTGAAACGCGACGGCGTCGCGCTGGAAGGGTCGCTGGCCGATGAACCGTTATTGA TGGGCGATATCATTCTGGTCGTGGGGAACTGGAAGTTAATCAGCCTGCTGGGGCAAAAAGGCCGCGACTTTGTGGTGCTG AATATGCCGGTCGAGGTCAGCGAAGCCTCGCCGGCGCACAGCCAGGCGCCGCACGCCATTTTCTGCCTGGTACTGATGGT GGCGCTGATGTTGACCGATGAAATTCCCAATCCGAGCGCGGCGATTATCGCCTGCCTGCTGATGGGGAAATTTCGCTGTA TTGATGCTGAAAGCGCGTATAAAGCGATCCACTGGCCGAGTATTATCTTGATTGTGGGTATGATGCCGTTTGCGCTGGCG TTGCAAAAAACCGGCGGCGTCTCTCTGGTCGTGCAAGGGTTAATGGATATCGGCGGCGGCTATGGGCCGTATATGATGCT GGGATGCCTGTTCGTGCTGTGCGCCGTCATAGGACTGTTCATTTCTAACACGGCAACGGCGGTGCTGATGGCGCCGATTG CGCTGGCGGCGGCGAAATCGATGGGGGTGTCGCCCTATCCGTTTGCGATGGCAGTAGCGATGGCGGCATCCGCCGCCTTT ATGACGCCGGTTTCATCGCCGGTCAATACTCTGGTTCTGGGGCCGGGAAACTATAGCTTTAGCGATTTTGTGAAGCTTGG CGTGCCGTTCACGCTTATTGTGATGGCGGTTTGTATTGTGATGATTCCGATGTTGTTTCCGTTTTAA
Upstream 100 bases:
>100_bases TGTGGTGGTGTTAAGAAAGACCTGATCATGATATGCCCCGCCCTGGCGGGGCATATTTATGGCAGAATCACGTTATCTTC TCATCTGACAAGGATATGTT
Downstream 100 bases:
>100_bases CCCCAGGCTGGAAAAGGCCTGATGGCGCTACGCTTATCAGGCCTACGGGAAGAACGGTAGGCCGGATAAGGCGTTAGCCG CCATCCGGCAACTAAAGCGG
Product: sodium/sulfate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 608; Mature: 608
Protein sequence:
>608_residues MNGELIWVLSLLAIAVVLFATGKVRMDAVALFVIVAFVLSGTLTLSEAFSGFSDPNVILIAALFIIGDGLVRTGVATVVG TWLVKMAGSSEIKMLVLLMITVAGLGAFMSSTGVVAIFIPVVLSVSMHMQTSPSRLMMPLSFAGLISGMMTLVATPPNLV VNSELLREGLHGFNFFSVTPLGVVVLALGIVYMLVMRFMLKGDAPGQQAGKRRTFRDLIREYRLTGRARRLAIRPGSPMV GQRLDDLKLRERYGANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSAAEVDLREFCAEQLLEPMVLRGEYFSDQAL DVGMAEISLIPKSELIGKSVREIAFRTRYGLNVVGLKRDGVALEGSLADEPLLMGDIILVVGNWKLISLLGQKGRDFVVL NMPVEVSEASPAHSQAPHAIFCLVLMVALMLTDEIPNPSAAIIACLLMGKFRCIDAESAYKAIHWPSIILIVGMMPFALA LQKTGGVSLVVQGLMDIGGGYGPYMMLGCLFVLCAVIGLFISNTATAVLMAPIALAAAKSMGVSPYPFAMAVAMAASAAF MTPVSSPVNTLVLGPGNYSFSDFVKLGVPFTLIVMAVCIVMIPMLFPF
Sequences:
>Translated_608_residues MNGELIWVLSLLAIAVVLFATGKVRMDAVALFVIVAFVLSGTLTLSEAFSGFSDPNVILIAALFIIGDGLVRTGVATVVG TWLVKMAGSSEIKMLVLLMITVAGLGAFMSSTGVVAIFIPVVLSVSMHMQTSPSRLMMPLSFAGLISGMMTLVATPPNLV VNSELLREGLHGFNFFSVTPLGVVVLALGIVYMLVMRFMLKGDAPGQQAGKRRTFRDLIREYRLTGRARRLAIRPGSPMV GQRLDDLKLRERYGANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSAAEVDLREFCAEQLLEPMVLRGEYFSDQAL DVGMAEISLIPKSELIGKSVREIAFRTRYGLNVVGLKRDGVALEGSLADEPLLMGDIILVVGNWKLISLLGQKGRDFVVL NMPVEVSEASPAHSQAPHAIFCLVLMVALMLTDEIPNPSAAIIACLLMGKFRCIDAESAYKAIHWPSIILIVGMMPFALA LQKTGGVSLVVQGLMDIGGGYGPYMMLGCLFVLCAVIGLFISNTATAVLMAPIALAAAKSMGVSPYPFAMAVAMAASAAF MTPVSSPVNTLVLGPGNYSFSDFVKLGVPFTLIVMAVCIVMIPMLFPF >Mature_608_residues MNGELIWVLSLLAIAVVLFATGKVRMDAVALFVIVAFVLSGTLTLSEAFSGFSDPNVILIAALFIIGDGLVRTGVATVVG TWLVKMAGSSEIKMLVLLMITVAGLGAFMSSTGVVAIFIPVVLSVSMHMQTSPSRLMMPLSFAGLISGMMTLVATPPNLV VNSELLREGLHGFNFFSVTPLGVVVLALGIVYMLVMRFMLKGDAPGQQAGKRRTFRDLIREYRLTGRARRLAIRPGSPMV GQRLDDLKLRERYGANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSAAEVDLREFCAEQLLEPMVLRGEYFSDQAL DVGMAEISLIPKSELIGKSVREIAFRTRYGLNVVGLKRDGVALEGSLADEPLLMGDIILVVGNWKLISLLGQKGRDFVVL NMPVEVSEASPAHSQAPHAIFCLVLMVALMLTDEIPNPSAAIIACLLMGKFRCIDAESAYKAIHWPSIILIVGMMPFALA LQKTGGVSLVVQGLMDIGGGYGPYMMLGCLFVLCAVIGLFISNTATAVLMAPIALAAAKSMGVSPYPFAMAVAMAASAAF MTPVSSPVNTLVLGPGNYSFSDFVKLGVPFTLIVMAVCIVMIPMLFPF
Specific function: Unknown
COG id: COG0471
COG function: function code P; Di- and tricarboxylate transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 RCK C-terminal domains [H]
Homologues:
Organism=Escherichia coli, GI1788629, Length=610, Percent_Identity=90.655737704918, Blast_Score=1097, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004680 - InterPro: IPR001898 - InterPro: IPR006037 [H]
Pfam domain/function: PF03600 CitMHS; PF02080 TrkA_C [H]
EC number: NA
Molecular weight: Translated: 65381; Mature: 65381
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: PS01271 NA_SULFATE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGELIWVLSLLAIAVVLFATGKVRMDAVALFVIVAFVLSGTLTLSEAFSGFSDPNVILI CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHH AALFIIGDGLVRTGVATVVGTWLVKMAGSSEIKMLVLLMITVAGLGAFMSSTGVVAIFIP HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH VVLSVSMHMQTSPSRLMMPLSFAGLISGMMTLVATPPNLVVNSELLREGLHGFNFFSVTP HHHHHHHHCCCCCCHHEHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHCCCCCCEEECH LGVVVLALGIVYMLVMRFMLKGDAPGQQAGKRRTFRDLIREYRLTGRARRLAIRPGSPMV HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCHH GQRLDDLKLRERYGANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSAAEVDLREFC HCCHHHHHHHHHHCCCEEEHHHHHHHHHHHEECCCCHHHHHCCEEEEECCHHHHHHHHHH AEQLLEPMVLRGEYFSDQALDVGMAEISLIPKSELIGKSVREIAFRTRYGLNVVGLKRDG HHHHHHHHHHCCCCCCCHHHHCCHHHHEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCC VALEGSLADEPLLMGDIILVVGNWKLISLLGQKGRDFVVLNMPVEVSEASPAHSQAPHAI EEEECCCCCCCEEECCEEEEECCHHHHHHHCCCCCCEEEEECCEEECCCCCCCCCCCHHH FCLVLMVALMLTDEIPNPSAAIIACLLMGKFRCIDAESAYKAIHWPSIILIVGMMPFALA HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHCCHHHHHHHHHHHHHHH LQKTGGVSLVVQGLMDIGGGYGPYMMLGCLFVLCAVIGLFISNTATAVLMAPIALAAAKS HHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGVSPYPFAMAVAMAASAAFMTPVSSPVNTLVLGPGNYSFSDFVKLGVPFTLIVMAVCIV CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHCCCHHHHHHHHHHH MIPMLFPF HHHHHCCC >Mature Secondary Structure MNGELIWVLSLLAIAVVLFATGKVRMDAVALFVIVAFVLSGTLTLSEAFSGFSDPNVILI CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHH AALFIIGDGLVRTGVATVVGTWLVKMAGSSEIKMLVLLMITVAGLGAFMSSTGVVAIFIP HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH VVLSVSMHMQTSPSRLMMPLSFAGLISGMMTLVATPPNLVVNSELLREGLHGFNFFSVTP HHHHHHHHCCCCCCHHEHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHCCCCCCEEECH LGVVVLALGIVYMLVMRFMLKGDAPGQQAGKRRTFRDLIREYRLTGRARRLAIRPGSPMV HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCHH GQRLDDLKLRERYGANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSAAEVDLREFC HCCHHHHHHHHHHCCCEEEHHHHHHHHHHHEECCCCHHHHHCCEEEEECCHHHHHHHHHH AEQLLEPMVLRGEYFSDQALDVGMAEISLIPKSELIGKSVREIAFRTRYGLNVVGLKRDG HHHHHHHHHHCCCCCCCHHHHCCHHHHEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCC VALEGSLADEPLLMGDIILVVGNWKLISLLGQKGRDFVVLNMPVEVSEASPAHSQAPHAI EEEECCCCCCCEEECCEEEEECCHHHHHHHCCCCCCEEEEECCEEECCCCCCCCCCCHHH FCLVLMVALMLTDEIPNPSAAIIACLLMGKFRCIDAESAYKAIHWPSIILIVGMMPFALA HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHCCHHHHHHHHHHHHHHH LQKTGGVSLVVQGLMDIGGGYGPYMMLGCLFVLCAVIGLFISNTATAVLMAPIALAAAKS HHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGVSPYPFAMAVAMAASAAFMTPVSSPVNTLVLGPGNYSFSDFVKLGVPFTLIVMAVCIV CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHCCCHHHHHHHHHHH MIPMLFPF HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]