Click here to switch to the map view.

The map label for this gene is yidJ [C]

Identifier: 29140628

GI number: 29140628

Start: 96041

End: 97345

Strand: Direct

Name: yidJ [C]

Synonym: t0086

Alternate gene names: 29140628

Gene position: 96041-97345 (Clockwise)

Preceding gene: 29140627

Following gene: 29140629

Centisome position: 2.0

GC content: 47.2

Gene sequence:

>1305_bases
ATGAAAACGGGGGTGACATTCTGTAATCATCAGAATACCAGTAATGTCTGTACGCCTTCCCGCTCCGTATTGTATACCGG
CTTACATATGCCCCAGACAAAGATGTTTGATAATCTGGGATTACCCTGGATGCCTTATGACCTTGACCCCGCTCTTGGAA
CCACAGGCCATATGATGCGGGAACTGGGATACTATACGGCCTATAAAGGTAAGTGGCATCTTACAGAAAAACTGGAGAAG
CCTTTGCCTGACGAAAAAGATGAGGATATTGATGTCGGGGATATTCCTGAACCAGAATTACATAAAATTATGGAAAAATA
TGGTTTTGCTGACTATCACGGCATCGGCGATATTATAGGCCATAGTAAAGGCGGCTATTTTTATGATTCAACCACCACGG
CTCAGACTATAAATTGGTTAAGATGCAAGGGGCAGCCCTTGAATGACCAACACAAGCCCTGGTTCCTGGCCGTTAACCTC
GTTAATCCTCATGACGTCATGTTTATTGATACCGATAAAGAAGGAGAAAAGGTACAGTGGCGTGGCGAGTTGGATCAGGA
TGATAATACCCTGGCGCCCACGCAGCCGCCGGAAAACGAGCTTTATCAGGCAAGCTGGCCGAACTATCCGCTGCCGGCAA
ACAGGCATCAATCATTCAATGAGCAGGGAAGACCGCCGGCGCATCTTGAATACCAGACGGCGCGCGCTGCGCTGGAAGGG
CAGTTTCCTGATGAAGATCGTCGTTGGCGTAAACTGCTTGACTACTATTTCAACTGTATCCGCGATTGTGATACTCACCT
TGACCGGATATTAAATGAACTGGATGCCCTCAAGTTAACTGATAAAACGATTGTTGTATTTACTGCCGATCATGGCGAAT
TAGGCGGAAGCCATCAGATGCACGGTAAAGGCGCTTCCGTTTATAAAGAACAGATCCATGTACCGATGATTATTTCCCAC
CCGGCGTACCCCGGTAATAAGAAATGTCAGGCGTTGACCTGTCATCTTGATATTGCGCCGACATTAGTTGGGCTGACCGG
TTTGCCGGAAGAAAAACAGCACCAGGCGTTAGGCAACCGCAAAGGCGTTAATTTTAGCGGATTGCTAAAAAACCCGGAGA
GCGTTGCGGTTAATGCGGTGAGAAATGCCAGCTTATATTGCTATGGCATGATCTTGTATACCGATGCCCATTATCTCCAC
CGTGTTATCGCGCTACAAAGAGATAAACAAAAACGGTGGCGCAAATCAAGCAGGAAATATCGCATTTGCATCCTGATTTC
AGCCATCGTTCAGGGACGCGGATGA

Upstream 100 bases:

>100_bases
GGAAAAATTGCCAGAAGGATATAATATTCTGTTAGTCGTGACCGACTAGGAGCGTTTTTTTCCTACGTTTCCTTTCCCTG
TACCCGGCAGAGAGCGGCTC

Downstream 100 bases:

>100_bases
TTAACGATGGCCGTTATAAGTTTGCACGCTATTTCTCGCTAAGGGAGCATAATACGCCGGAAACCTGGGAGGATCTTATT
AAGTACAACGATCTTGAACT

Product: sulfatase

Products: NA

Alternate protein names: Sulfatase Family Protein; Arylsulfatase A; Arylsulfatase; N-Acetylglucosamine-6-Sulfatase; Mucin-Desulfating Sulfatase; Type I Phosphodiesterase/Nucleotide Pyrophosphatase Family; Arylsulfatase A Family Protein; Phosphatase/Sulfatase; Phosphonate Monoester Hydrolase; Hydrolase; Twin-Arginine Translocation Pathway Signal; Arylsulfatase A Like Protein; Iduronate-2-Sulfatase

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MKTGVTFCNHQNTSNVCTPSRSVLYTGLHMPQTKMFDNLGLPWMPYDLDPALGTTGHMMRELGYYTAYKGKWHLTEKLEK
PLPDEKDEDIDVGDIPEPELHKIMEKYGFADYHGIGDIIGHSKGGYFYDSTTTAQTINWLRCKGQPLNDQHKPWFLAVNL
VNPHDVMFIDTDKEGEKVQWRGELDQDDNTLAPTQPPENELYQASWPNYPLPANRHQSFNEQGRPPAHLEYQTARAALEG
QFPDEDRRWRKLLDYYFNCIRDCDTHLDRILNELDALKLTDKTIVVFTADHGELGGSHQMHGKGASVYKEQIHVPMIISH
PAYPGNKKCQALTCHLDIAPTLVGLTGLPEEKQHQALGNRKGVNFSGLLKNPESVAVNAVRNASLYCYGMILYTDAHYLH
RVIALQRDKQKRWRKSSRKYRICILISAIVQGRG

Sequences:

>Translated_434_residues
MKTGVTFCNHQNTSNVCTPSRSVLYTGLHMPQTKMFDNLGLPWMPYDLDPALGTTGHMMRELGYYTAYKGKWHLTEKLEK
PLPDEKDEDIDVGDIPEPELHKIMEKYGFADYHGIGDIIGHSKGGYFYDSTTTAQTINWLRCKGQPLNDQHKPWFLAVNL
VNPHDVMFIDTDKEGEKVQWRGELDQDDNTLAPTQPPENELYQASWPNYPLPANRHQSFNEQGRPPAHLEYQTARAALEG
QFPDEDRRWRKLLDYYFNCIRDCDTHLDRILNELDALKLTDKTIVVFTADHGELGGSHQMHGKGASVYKEQIHVPMIISH
PAYPGNKKCQALTCHLDIAPTLVGLTGLPEEKQHQALGNRKGVNFSGLLKNPESVAVNAVRNASLYCYGMILYTDAHYLH
RVIALQRDKQKRWRKSSRKYRICILISAIVQGRG
>Mature_434_residues
MKTGVTFCNHQNTSNVCTPSRSVLYTGLHMPQTKMFDNLGLPWMPYDLDPALGTTGHMMRELGYYTAYKGKWHLTEKLEK
PLPDEKDEDIDVGDIPEPELHKIMEKYGFADYHGIGDIIGHSKGGYFYDSTTTAQTINWLRCKGQPLNDQHKPWFLAVNL
VNPHDVMFIDTDKEGEKVQWRGELDQDDNTLAPTQPPENELYQASWPNYPLPANRHQSFNEQGRPPAHLEYQTARAALEG
QFPDEDRRWRKLLDYYFNCIRDCDTHLDRILNELDALKLTDKTIVVFTADHGELGGSHQMHGKGASVYKEQIHVPMIISH
PAYPGNKKCQALTCHLDIAPTLVGLTGLPEEKQHQALGNRKGVNFSGLLKNPESVAVNAVRNASLYCYGMILYTDAHYLH
RVIALQRDKQKRWRKSSRKYRICILISAIVQGRG

Specific function: Unknown

COG id: COG3119

COG function: function code P; Arylsulfatase A and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.6.- [C]

Molecular weight: Translated: 49500; Mature: 49500

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTGVTFCNHQNTSNVCTPSRSVLYTGLHMPQTKMFDNLGLPWMPYDLDPALGTTGHMMR
CCCCCEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
ELGYYTAYKGKWHLTEKLEKPLPDEKDEDIDVGDIPEPELHKIMEKYGFADYHGIGDIIG
HHCCCEEECCCEEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHC
HSKGGYFYDSTTTAQTINWLRCKGQPLNDQHKPWFLAVNLVNPHDVMFIDTDKEGEKVQW
CCCCCEEECCCCHHHHHHEEEECCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCEEEE
RGELDQDDNTLAPTQPPENELYQASWPNYPLPANRHQSFNEQGRPPAHLEYQTARAALEG
ECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCC
QFPDEDRRWRKLLDYYFNCIRDCDTHLDRILNELDALKLTDKTIVVFTADHGELGGSHQM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCCCCCC
HGKGASVYKEQIHVPMIISHPAYPGNKKCQALTCHLDIAPTLVGLTGLPEEKQHQALGNR
CCCCHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECHHHHHCCCCCCCHHHHHHHCCC
KGVNFSGLLKNPESVAVNAVRNASLYCYGMILYTDAHYLHRVIALQRDKQKRWRKSSRKY
CCCCHHHCCCCCHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCE
RICILISAIVQGRG
EEEEEEEHHHCCCC
>Mature Secondary Structure
MKTGVTFCNHQNTSNVCTPSRSVLYTGLHMPQTKMFDNLGLPWMPYDLDPALGTTGHMMR
CCCCCEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
ELGYYTAYKGKWHLTEKLEKPLPDEKDEDIDVGDIPEPELHKIMEKYGFADYHGIGDIIG
HHCCCEEECCCEEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHC
HSKGGYFYDSTTTAQTINWLRCKGQPLNDQHKPWFLAVNLVNPHDVMFIDTDKEGEKVQW
CCCCCEEECCCCHHHHHHEEEECCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCEEEE
RGELDQDDNTLAPTQPPENELYQASWPNYPLPANRHQSFNEQGRPPAHLEYQTARAALEG
ECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCC
QFPDEDRRWRKLLDYYFNCIRDCDTHLDRILNELDALKLTDKTIVVFTADHGELGGSHQM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCCCCCC
HGKGASVYKEQIHVPMIISHPAYPGNKKCQALTCHLDIAPTLVGLTGLPEEKQHQALGNR
CCCCHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECHHHHHCCCCCCCHHHHHHHCCC
KGVNFSGLLKNPESVAVNAVRNASLYCYGMILYTDAHYLHRVIALQRDKQKRWRKSSRKY
CCCCHHHCCCCCHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCE
RICILISAIVQGRG
EEEEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Sulfuric ester hydrolases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA