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The map label for this gene is fixX

Identifier: 29140621

GI number: 29140621

Start: 91552

End: 91839

Strand: Direct

Name: fixX

Synonym: t0079

Alternate gene names: 29140621

Gene position: 91552-91839 (Clockwise)

Preceding gene: 29140620

Following gene: 29140622

Centisome position: 1.91

GC content: 53.82

Gene sequence:

>288_bases
ATGACATCTCCCGTCAATGTGGACGTCAAATTGGGCGTCAATAAGTTCAATGTGGATGAAGATAGCCCGCACATCATTCT
CAAAACCGATCCTGATAAACAGGCGCTGGAGGTGCTGGTTAAGGCCTGTCCGGCGGGACTGTATAAAAAGCAGGACGACG
GTAGCGTTCGTTTTGATTACGCCGGGTGCCTGGAGTGCGGAACATGCCGGATCCTCGGCCTTGATACGGCGCTGGAAAAA
TGGGAATACCCACGCGGGACGTTTGGCGTGGAGTTCCGCTACGGCTAA

Upstream 100 bases:

>100_bases
GCTCCGCGCCGGTGCCCATGCGTAAAAAAATCCTGCGCCATGCGAAGAAAGTGGGCTTCATCAACCTGATGAAAGATGGC
CTGAAAGGAGTGACCGTATT

Downstream 100 bases:

>100_bases
TAAGTACGAGTTTGTGCCCCCGTAGGCCGGATTAGATGCGGTAGCGTCGCCATCCGGCAATCATGTGGCGCCAATGCCGG
ATGGCGGCGTAAACGCCTTA

Product: ferredoxin like protein FixX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MTSPVNVDVKLGVNKFNVDEDSPHIILKTDPDKQALEVLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLDTALEK
WEYPRGTFGVEFRYG

Sequences:

>Translated_95_residues
MTSPVNVDVKLGVNKFNVDEDSPHIILKTDPDKQALEVLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLDTALEK
WEYPRGTFGVEFRYG
>Mature_94_residues
TSPVNVDVKLGVNKFNVDEDSPHIILKTDPDKQALEVLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLDTALEKW
EYPRGTFGVEFRYG

Specific function: Could be part of an electron transfer system required for anaerobic carnitine reduction. Could be a 3Fe-4S cluster- containing protein

COG id: COG2440

COG function: function code C; Ferredoxin-like protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial-type ferredoxin family. FixX subfamily

Homologues:

Organism=Escherichia coli, GI1786228, Length=95, Percent_Identity=89.4736842105263, Blast_Score=183, Evalue=2e-48,
Organism=Escherichia coli, GI1787992, Length=94, Percent_Identity=63.8297872340426, Blast_Score=136, Evalue=3e-34,
Organism=Escherichia coli, GI87082156, Length=75, Percent_Identity=45.3333333333333, Blast_Score=86, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FIXX_SALTI (Q8Z9K8)

Other databases:

- EMBL:   AL627265
- EMBL:   AE014613
- RefSeq:   NP_454688.1
- RefSeq:   NP_803963.1
- GeneID:   1067636
- GeneID:   1246590
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AL513382_GR
- KEGG:   stt:t0079
- KEGG:   sty:STY0088
- HOGENOM:   HBG498683
- OMA:   PARCYEL
- ProtClustDB:   PRK15449
- BioCyc:   SENT209261:T0079-MONOMER
- BioCyc:   SENT220341:STY0088-MONOMER
- GO:   GO:0006810
- InterPro:   IPR012206
- PIRSF:   PIRSF036548

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10557; Mature: 10426

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS00198 4FE4S_FER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPVNVDVKLGVNKFNVDEDSPHIILKTDPDKQALEVLVKACPAGLYKKQDDGSVRFDY
CCCCCEEEEEECCEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEECCCCCEEEEE
AGCLECGTCRILGLDTALEKWEYPRGTFGVEFRYG
CCCCCCCCEEEEECCHHHHHCCCCCCCEEEEEECC
>Mature Secondary Structure 
TSPVNVDVKLGVNKFNVDEDSPHIILKTDPDKQALEVLVKACPAGLYKKQDDGSVRFDY
CCCCEEEEEECCEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEECCCCCEEEEE
AGCLECGTCRILGLDTALEKWEYPRGTFGVEFRYG
CCCCCCCCEEEEECCHHHHHCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504