Definition Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome.
Accession NC_004578
Length 6,397,126

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The map label for this gene is hopA1

Identifier: 28872465

GI number:

Start: 6086243

End: 6087385

Strand: Direct

Name: hopA1

Synonym: PSPTO_5354

Alternate gene names: NA

Gene position: NA

Preceding gene: 28872464

Following gene: 28872466

Centisome position: NA

GC content: NA

Gene sequence:

>1143_bases
ATGAACCCCATTCAGTCACGCTTCTCCAGTGTGCAAGAGCTCAGACGATCCAACGTTGATATTCCGGCGCTCAAAGCCAA
TGGCCAACTGGAGGTCGACGGCAAGAGGTACGAGATTCGTGCAGCCGATGACGGAACAATTTCGGTCCTTCGACCGGAGC
AACAATCCAAAGCGAAAAGTTTTTTCAAGGGCGCTTCCCAGTTGATAGGTGGCAGCAGCCAGCGCGCGCAGATTGCCCAG
GCGCTCAACGAGAAGGTCGCATCGGCACGCACTGTCTTGCACCAGAGCGCTATGACGGGCGGACGCTTGGACACCCTTGA
GCGGGGCGAAAGCAGCTCAGCCACAACAGCCATCAAACCCACTGCCAAACAGGCTGCGCAAAGTACTTTTAACAGCTTTC
ATGAGTGGGCCAAACAGGCAGAGGCGATGCGAAACCCGTCTCGAATGGATATCTACAAGATCTATAAACAAGATGCACCT
CACTCACACCCCATGAGCGACGAGCAGCAAGAAGAGTTCCTGCACACGCTAAAGGCATTGAATGGCAAAAACGGCATTGA
GGTGCGCACTCAGGACCACGACAGCGTCAGAAATAAAAAAGACCGCAACCTGGACAAGTACATCGCAGAGAGCCCGGATG
CAAAGAGGTTTTTCTATCGAATTATCCCCAAACATGAGCGCCGAGAAGATAAGAATCAAGGGCGATTGACCATTGGCGTG
CAACCCCAATATGCAACACAGTTGACCCGCGCCATGGCAACCCTGATAGGGAAGGAAAGTGCAATCACGCATGGCAAAGT
AATAGGCCCCGCCTGCCACGGCCAAATGACCGATTCGGCAGTTTTGTATATCAACGGTGATGTTGCAAAGGCAGAAAAGC
TGGGCGAGAAACTGAAACAGATGAGCGGCATTCCTCTGGATGCGTTCGTTGAGCACACCCCTTTGAGCATGCAATCCCTG
AGTAAAGGTCTGTCCTATGCAGAAAGCATCCTGGGCGACACCAGAGGCCATGGGATGTCGCGAGCGGAAGTGATCAGCGA
TGCCTTGAGGATGGACGGGATGCCATTTCTGGCCAGATTGAAGCTATCACTGTCTGCCAATGGCTATGACCCGGACAACC
CGGCCCTTCGAAACACGAAATGA

Upstream 100 bases:

>100_bases
GCGAAATGGCAGGTCTGCTGGAGTGGATGAGGGGCTGGCGCGAAGCAAGCCAATAGACGCCTTAAGACTCTCGATGCACT
TTTTAAATGAGAAATAACCC

Downstream 100 bases:

>100_bases
AAGCAGCGTTCGGCGTAAGTGCAGCGATTCTGAGTGAGACCCACCCTGGCAAAACCTTGGTTATTTGCCATGTCTGCGCT
TCAATAGCGGCCTTCGCACT

Product: type III effector HopA1

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>380_residues
MNPIQSRFSSVQELRRSNVDIPALKANGQLEVDGKRYEIRAADDGTISVLRPEQQSKAKSFFKGASQLIGGSSQRAQIAQ
ALNEKVASARTVLHQSAMTGGRLDTLERGESSSATTAIKPTAKQAAQSTFNSFHEWAKQAEAMRNPSRMDIYKIYKQDAP
HSHPMSDEQQEEFLHTLKALNGKNGIEVRTQDHDSVRNKKDRNLDKYIAESPDAKRFFYRIIPKHERREDKNQGRLTIGV
QPQYATQLTRAMATLIGKESAITHGKVIGPACHGQMTDSAVLYINGDVAKAEKLGEKLKQMSGIPLDAFVEHTPLSMQSL
SKGLSYAESILGDTRGHGMSRAEVISDALRMDGMPFLARLKLSLSANGYDPDNPALRNTK

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA