Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 28872183

GI number:

Start: 5774194

End: 5776083

Strand: Direct

Name: Not Available

Synonym: PSPTO_5070

Alternate gene names: NA

Gene position: NA

Preceding gene: 28872182

Following gene: 28872188

Centisome position: NA

GC content: NA

Gene sequence:

>1890_bases
ATGTCCTTTGCTTCCCTCGGTCTCTCCGAGGCTTTAGTCCGCGCCATCGAGGCAGCGGGCTACACCCAGCCTACCCCAGT
GCAACAGCGGGCCATCCCCGCCGTGTTGCAAGGTCGCGACCTGATGGTTGCGGCACAGACCGGTACGGGTAAAACCGGTG
GTTTCGCCCTCCCTATTCTGGAGCGGCTGTTTCCCAATGGTGTTCCGGACAAATCCCAGCGTCACGGCCCGCGCCAACCC
CGCGTACTGGTCCTGACCCCGACTCGCGAACTGGCCGCGCAAGTGCACGAGAGCTTCAAGCTCTATGCCCGCGACCTCAA
GTTCGTCAGTGCCTGCATCTTCGGCGGCGTCGGCATGAACCCACAGGTTCAGGCCATGTCCCGTGGTGTAGACGTACTGG
TGGCCTGCCCTGGCCGCCTGCTCGATCTGGCCGGTCAAGGCAGCGTCGATCTGTCCCACGTCGAAATTCTGGTGCTCGAT
GAAGCAGACCGGATGCTCGACATGGGCTTCGTCCATGACGTCAAAAAGGTCCTGGCACGTTTGCCGGCCAAGCGTCAGAA
CCTGCTGTTCTCAGCGACCTTCTCCAATGACATCACGTCCCTGGCCGGCAAGCTGCTGCACAACCCGGAGCGTATCGAAG
TCACGCCGCCGAACACCACGGTCGAGCGCATCGAGCAACGGGTTTTCCGTCTGGCTGCCAACCACAAGCGTTCGCTGCTG
GCGCATCTGATCACCGTGGGCGCCTGGGAACAGGTGCTGGTGTTCACCCGCACCAAGCACGGTGCCAACCGTCTCGCCGA
GTACCTGGACAAACACGGCCTTGCGGCAGTAGCGATCCACGGCAACAAGAGCCAGAACGCACGTACCAAAGCGCTGGCCG
ATTTCAAGGCCGGTGATGTGCGCATCATGGTGGCTACCGATATCGCCGCGCGCGGTCTGGATATCGATCAGTTGCCGCAT
GTCGTCAACTTCGAGCTGCCTAACGTCGATGAAGACTACGTGCACCGTATCGGTCGTACCGGCCGTGCAGGTCGCTCCGG
CGAAGCCATCTCGCTGGTTGCACCGGACGAAGAGAAGCTGCTCAAAAGTATCGAGCGCATGACCAAACAGAAGATTGCCG
ACGGTGATCTAATGGGCTTCGATATCACTGCAGTTGAGGCCGAGAAGCCTGAAGTGCGTGAGCGTCCCGATGTTCGCAAC
TCGCGCGGCGCACGTCCTGCGCGTGCCGATGGCGACAAGAACAACGGTGGTCGTCGCGACAAGGGCAAGGATAAAGGTAA
GGACAAACCTGCCGCTGCGGCAGCTACAGGCGAACGCCCAGCCCGGCCGCCACGCGAAAAAAAGCCCCGTGAGGGCACGC
CTCGTAGCGAACAGCGTGCAGTGCAGCCTTCAACTCCGCGTCAGGCATCAGATCGTGCCCCGGACGAGTTTCGCGACGAC
GAAGTCGATAACTTCGGCAATCGTGCTGACTACGTAAGCCCTTATCAGGGTAAAGGCCAAAACCGTGGCCGTCGCCCTGC
TGCTGCGCCTGGCGCTGCACCGGCGGCCGGCGGCGCTGCACGTCCGGCCAATTCGGGCCGCCCTGCGGGTGGCGCGCCAC
GTACCGGTTCTGGTGCTGGTGCACCGAAGCGCAATGGTTCGGGTTCTTCGGCGCCGCGCTCGCGCGACAGCCAGCCGCGC
GGTCGTCGCCCGGCACGCGAAGATCAACCCTTGCCGCGCGAAGGCCAGGAGCCCGCTGTACGCGCCCCACGCGACGGCCA
GCCTCAGCCAAAGATCGTGCACAAAGAGTCCAAGATCGACCGCTTCCCGTCTGCCGAGCAACTGGACCAGTTGCCAGCAC
GCCCACGTGGTGAAAAACCGGCCCTGCTGACCCGCAACCGCGACAGCTGA

Upstream 100 bases:

>100_bases
AAGACCCGGCAGGACCGGACGGGATCGCGTTGTCTTTACACGCCATTCGCGCCAGGCAAGACATCCCTTGAGCTTAAGCT
CCAACAGAACAGGATTACTC

Downstream 100 bases:

>100_bases
TAGCCCGGCAACAACAAAACGCCCCGACCTGTTCGGGGCGTTTTTGTTTGTGGGCCTGGAGGATGTTGATCATCGCTCCC
ACGCTCCGCGTGGTAGCGCA

Product: ATP-dependent RNA helicase rhlE

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>629_residues
MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILERLFPNGVPDKSQRHGPRQP
RVLVLTPTRELAAQVHESFKLYARDLKFVSACIFGGVGMNPQVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLD
EADRMLDMGFVHDVKKVLARLPAKRQNLLFSATFSNDITSLAGKLLHNPERIEVTPPNTTVERIEQRVFRLAANHKRSLL
AHLITVGAWEQVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTKALADFKAGDVRIMVATDIAARGLDIDQLPH
VVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKLLKSIERMTKQKIADGDLMGFDITAVEAEKPEVRERPDVRN
SRGARPARADGDKNNGGRRDKGKDKGKDKPAAAAATGERPARPPREKKPREGTPRSEQRAVQPSTPRQASDRAPDEFRDD
EVDNFGNRADYVSPYQGKGQNRGRRPAAAPGAAPAAGGAARPANSGRPAGGAPRTGSGAGAPKRNGSGSSAPRSRDSQPR
GRRPAREDQPLPREGQEPAVRAPRDGQPQPKIVHKESKIDRFPSAEQLDQLPARPRGEKPALLTRNRDS

Sequences:
NA

Specific function: NA

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA