Definition Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome.
Accession NC_004578
Length 6,397,126

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Identifier: 28872084

GI number:

Start: 5636765

End: 5641774

Strand: Direct

Name: Not Available

Synonym: PSPTO_4970

Alternate gene names: NA

Gene position: NA

Preceding gene: 28872083

Following gene: 28872088

Centisome position: NA

GC content: NA

Gene sequence:

>5010_bases
ATGATCATCCTTTTAAAAGCCATCTACGCAGTATCCATGCCTGACGCCAACCTGATCAAACTGTATCAGGATGCCAACAC
TGGCGAAGCCATTCTCGCCGGGTTTCTACCTCAGCTTTACATGGGAGCCGGTATTGTCGACTGGAGTGCATCCGTTACTG
AGTGGAAGAAAGACAAAGCAGGTCTCTTGAAAAAAATTGCTTACTGGGAGAGAGCGTTTGGTCAGTTGCTTCCGTCGGAA
GTGACATCACCGCAAGGAGGAACTCTGTCTATTGAATGGAGCCGTAACCAAGGCCAATTTCTCCTTAAAAAAATATCAAG
CGACGGTAACGTCATCCTCTCTTCAACCTACAGCGCGCCCTCATCAGACACCAGTACAGTTGAGATCAGCGTGTGGCCAA
AAACGGATGAGGCTTACACGGTCAGACTTGAACTTTCCTCGTACGCGTTAACAGGTTTGACACGAATAGAAAAAAACCTA
AAGGTCTCACAAAAACTAAAATACGGTTACTGTGCGGACCCCACGCTGGACCGGGTGCTCAATAGAATCGAAGAGGAGGA
TGGCTCGATTGAGCTTGTCACATACCGTGAAGGGGGCATGCCATTTCCATACTATCGACAGCCACCTCTTCCATGCGTAA
CATTGCACAGCTTATTTCCCGGCGCTTGCCAGAGCAATATCACTGATCACTATTTTTATTCAGGAACCAATTATTTAGGC
TTTAGCGAGCCTCCTGATGCTCACCAAAACCGCCTATATTATGAACGGCTTGAACTTCGCGAGTTAGTCGACGATGAAGG
CTATTATGTTCAGATTCTGCGTCAGAACCCGGACCATATTGTCTCTACACGGCACGCGTTCAATAAAAATCATCTTCAAG
TCAGAGAAGATCTCCAGGTCCAGTTTCAGGCCGAGAAGGTCATCAGTTGGGAGTTCGCCAATGCAAGTCCGGGTGAGAAG
GTATTCGGGTTGCCCACTAAAATTACGACCGACTATACCGACCTCAGCCACCCGAACACAGAAAGAACCACTACCGTCCA
GACACTGGCCTACAACAACATCGGCCAACTCACCAAGAGTATCGCTGTCGACGGGGTTGTCACTGAATGGTTGTATTACC
CCGACACTGGCGGGCAAGGGCTGGACATATCGCTGATCGCCGAAAAACCGCTATCGAAAGACTTGGTGACCCTGACCTGC
CCGAAAGTATCCGAAGGCTATATGCCTCCGGTGAAAGTAGAGTACGTCCATGATCCGGCCTATCCGAAAAGTCAGCAAAT
CACAGCCTATGCTTACCAGGCCAGGGAAAACCCGGTCAATCAACGCTCAGTCCTCGTGCCCTCAACAGTCGTTGTTTTGA
CCGGGGTTACGCTCGACACTACAACCATGCTGCCCTCATTAATGGAGGGTCGCAAAAACGCATTGATTGAACAGCGGGTT
ATCAGCCGCTCGATTCCCGACGTCGCGACCGAAAATACAACTGCCTGGAAAGAATCCGTTGTACAGAACTCCTGGCTGGG
TATGCAACGGAATACGCTGACCACAAGCATGCTCTATGACGACAATCCATCTGTTGGGCGCACCGTTCGCGCCGAGGCAC
AGGGGAAGATTATATCCAGTCGGATTTTCTCTCGATTGAGCGGGCGACCGCTGTCAGAAACCAGAGACGGCCTCGAATTC
CGATATGTTCACGATAGTTTGGGGCGACTGGTGAGACAGGAACGGGGTACCACCGAAGCGGGTGCATGGAAAGCAGACGC
GGTCGAAACGACTGACTACAGTATTACCGCCGAGGGATTACAAGTCACTGTCACCGAAGCTGAGCAACAGGTACGCACGC
TTTATGACGGTTTGCAGCGCCCTGTCTGGGTGGCCATAAAGCGGACGATATTGCCTGATTCGGCGTTCTGTGTGATCTCG
CGCATCGAATATGACGGTCCCGATGCCACCAATCAGACACTATACGATTACTTGCCCGGCGGGTTACGCCGCACTAAAGA
TGCCAGACCTGAGGCGGCTGTGGACGCCTCAAAACTGGCCTGGATGGCCGATTACACGCGGGAAGATGCAGGAATCCTTA
TAAATGAGCAAGTTATCGGCGCTGACAGCGGCGCCCAACTCATAAGGCAGCTTTCCGGACGGAATTTAGATAAGAGCCAC
ACCGCGCTACTCGAAACACTCCGGCCATCTACTGCCAGGGACGCATCAACCGACCGGACTATCGAGCGCACGTTCGACGA
TGAAAGGCGATTGATAAAAATCCGTACCAGCAACACCAGTGAACATTGCATCGAATATGACGAGTTGGAGCGTGCAGTAG
CTATCATCGCTCCCGACGGCACTCGCACAGAACGTAAGTACCACCAACTCAGCGACTACATCACACAACTCAACGTCGGA
TCCACTGTGCTTGGCACGCAAAAAATGACCGCCGCCGCCAGGCAGACTACCGTAGGAGAGTTAACGTATGAATTCCCGGG
CGGGTCCGCCAGCACAGTCGTCAGGCCGGATAAGACCCTGCTCGAATCAGCCGTCTCAGCAGATGGACACACAGCAACTC
TTTCGATCAACAAGAAAGTTCATACACAACGGGTAATCTCTCAACCCAACGTACTGACTGTCACTGTGGACCCTGTATCG
GTACCCAGCGCCGAGGCGTGGTCCAGCCTTACAAGTTCACCGCAAAGTCTGGGGTTAACGAGTATTACCCAAACATCGCC
CCGAGGAAGTCGGCAGGCCGAAATGACCCGATCACTGAAGGGCAGGCTCTTGACGAACACGGCAGTAGATGGTCGCCAGA
TGCGGGTATTTCGCGACTACCTGGACCGTGTAGTTCGTGTGATTCTTGGTGAATTGCACTATCACTATCTCTGGTCCGCG
TTTGGTGAGCCGCTACAACGCACGGTGGTCAATCAGGCAAGCGGTGAACGCCTTGACGTTCGCTTTACGTGGGACGCGTT
CGGCCAAGAGATAGCACGCGAATATACACTCAACAACAAACCGTTATTGGCCTTGACGAACAGTTACCTGGCCAATGGCC
AAGTGAGCAGTAAAACCCTGACGCGTGAAGGAGTGCTCCAACGCACGGAAGGCTTCTCCTACGATGCCCGGGATCGACTG
AACAGCTACGAATGCACGACTGACGTTGCAGACTGGCCTCAGGATCAGGCTGGAAAGAGCCTTTCGAAGCAGAGCTATGG
TTATGACGAATTACACAACCTGAGCGAATGCTCTTCGACCTACGCCGATGGCAGCACCTGTATTCAAACATACACGTATG
ACACCGTTAAAAATCCGACTCGAAGACTGTCTGTAAAAACCGAATTGAGGTCAGGCTCCCAAACAACATCGACACAGACG
GCTACGCTCGCTTACGACGCCAACGGCAATCAAACCACTGACGAATCAGGACGCACGCTGGCCTATACGCCACTGGGGCA
ATTGGCGAGCGTTAAAGACAACGACGGCAAACTGTTGACTCGCTATAGTTATGATGCATTTGGCCGTCTTATATCTCAAT
ACATCGGCGCCACAAAGCACACCTGTGAGCTGCTGTATGACGGCACGCAACTGACGGGAGAAGCATGGTTCGACGATGCG
AACAGGGAATTCAAACGTATCCTGTTCAGCGAGGATATGGTACAGCAAACCTGTATTGGCGAAACCGTGCGGTCAGACTT
CGTCCTCACCGACCCCGGCAGCGGTGTCGTTGGATTTAGCGCGCATGATGGAACGGCTGGAGTAAAACTGCACCCACTTG
GCTATACCCCTTATGGCGAGAGCACCAACCTCGATAGCGGATGTCGGCTGGGCTTCAATAGCGAGCGTATCGACCCAGTA
TTGGGCTGGTATCACTTGGGCAACGGCTACAGGACGTATAGTCCGGCACAGCGACATTGGTTGCAACCCGACAGCTGGAG
CCCCTTTGGAGCAGGCGGCATCAACAATACCGCCTACTGCGCAGGCGACCCGGTCAACCTGTTCGACCCCAGCGGGCATG
TAATGATCAGCCGCTGGGGCGCCAGTAATATGATCAGTGACTTGACGAAGGCATTACAGGAAACCAGTCCTCAACCACTG
GGCCATTTCTGGAGAGGCCTTGCGGTCAACGCAAGCGTCGCCGTCGCGGGCGTCCTGATGGTCCCCCTCACAGGAGGGTC
TTCTTTGGGATTTGCTGCTGGCGTCCTCGCGACAACATTGGCTGTTGCTTCCGCAGGTCTTGATATAGCCAGTTACGTAC
TGGAAGACGTCAACCCCGAATTGGCCCGAAAACTGGGAACCGCCGCTACCGCTCTGGGTTTTATATCGAATGCCCCCTTT
AGAGCGGGATTAAGATTGGGCGGTCGGCTGCTACGCTGGACGTCAAGCAGGACCGGCAGACTTATCTCGAGGGTTGAGTC
CATATTTACAAAGGGACCAAAGCTAAAGCTCCTTACCGGAACGATAAAGGTACTCAAGCCAGGGATGTCGTCTTATGGAG
CAAGCAACGTTACCCGCTGGGCACCAGGCAAGCTTGATAAGTTTGAAAAACTGGAAAATGCGCTCTTCATGACAGTAGAC
AAGCAAGGAAAACGCGTTACGTTTATGGCTCACGGTGTGAAGCCTGACGACGTCGGGGACGCAGCAATGATGGCGATTGA
GGAATACAGCGGAAGCGGGCCTTACAGTGGAAAATCATTTTCAGCCTATTCGTTTTTTGATTTCCTGAAATCAAAAAAAG
TAGACCTCAATAAATATGAGAAAGTACGGCTGATAATGTGTCACTCAGCAGACGGGGGGGAAAAATCATTCGCCGCCACA
TTTTCAAAGCTCACAAATAAACCGGTAAAGGGCTATGAGGGAGTGGTTGACACGCGTTTTGGCATGGAAGACTCAATGGA
CGCTTTCCGAGGGGTAAGAGGCCCAGACCAAATCAAGGCAGTTCAAGAGCAACTGAAATCAACTCCACAAGAAACGATAA
AAAAAGTGATTAGTAATGAACCGGGCTTCTCTAAGGAAGGTCTGAAGTAG

Upstream 100 bases:

>100_bases
ATTACACCACGTTCAAGTTGGACCATCTCAACGGCAAGCGAGAAGTCCTGACTGCCCCGCAAGGCGATCAGATGGAGCCG
AACGATACCTTCCGTAAAAA

Downstream 100 bases:

>100_bases
GCATCGATTTTTGACGCTCTCATGGCCTGAGGTTCAAAAAAAGCTCGCCCGATCAGATAATTAGACGTTTTCCGCTCTTA
ACTCATCGATTTTCCTTCAA

Product: YD repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1669_residues
MIILLKAIYAVSMPDANLIKLYQDANTGEAILAGFLPQLYMGAGIVDWSASVTEWKKDKAGLLKKIAYWERAFGQLLPSE
VTSPQGGTLSIEWSRNQGQFLLKKISSDGNVILSSTYSAPSSDTSTVEISVWPKTDEAYTVRLELSSYALTGLTRIEKNL
KVSQKLKYGYCADPTLDRVLNRIEEEDGSIELVTYREGGMPFPYYRQPPLPCVTLHSLFPGACQSNITDHYFYSGTNYLG
FSEPPDAHQNRLYYERLELRELVDDEGYYVQILRQNPDHIVSTRHAFNKNHLQVREDLQVQFQAEKVISWEFANASPGEK
VFGLPTKITTDYTDLSHPNTERTTTVQTLAYNNIGQLTKSIAVDGVVTEWLYYPDTGGQGLDISLIAEKPLSKDLVTLTC
PKVSEGYMPPVKVEYVHDPAYPKSQQITAYAYQARENPVNQRSVLVPSTVVVLTGVTLDTTTMLPSLMEGRKNALIEQRV
ISRSIPDVATENTTAWKESVVQNSWLGMQRNTLTTSMLYDDNPSVGRTVRAEAQGKIISSRIFSRLSGRPLSETRDGLEF
RYVHDSLGRLVRQERGTTEAGAWKADAVETTDYSITAEGLQVTVTEAEQQVRTLYDGLQRPVWVAIKRTILPDSAFCVIS
RIEYDGPDATNQTLYDYLPGGLRRTKDARPEAAVDASKLAWMADYTREDAGILINEQVIGADSGAQLIRQLSGRNLDKSH
TALLETLRPSTARDASTDRTIERTFDDERRLIKIRTSNTSEHCIEYDELERAVAIIAPDGTRTERKYHQLSDYITQLNVG
STVLGTQKMTAAARQTTVGELTYEFPGGSASTVVRPDKTLLESAVSADGHTATLSINKKVHTQRVISQPNVLTVTVDPVS
VPSAEAWSSLTSSPQSLGLTSITQTSPRGSRQAEMTRSLKGRLLTNTAVDGRQMRVFRDYLDRVVRVILGELHYHYLWSA
FGEPLQRTVVNQASGERLDVRFTWDAFGQEIAREYTLNNKPLLALTNSYLANGQVSSKTLTREGVLQRTEGFSYDARDRL
NSYECTTDVADWPQDQAGKSLSKQSYGYDELHNLSECSSTYADGSTCIQTYTYDTVKNPTRRLSVKTELRSGSQTTSTQT
ATLAYDANGNQTTDESGRTLAYTPLGQLASVKDNDGKLLTRYSYDAFGRLISQYIGATKHTCELLYDGTQLTGEAWFDDA
NREFKRILFSEDMVQQTCIGETVRSDFVLTDPGSGVVGFSAHDGTAGVKLHPLGYTPYGESTNLDSGCRLGFNSERIDPV
LGWYHLGNGYRTYSPAQRHWLQPDSWSPFGAGGINNTAYCAGDPVNLFDPSGHVMISRWGASNMISDLTKALQETSPQPL
GHFWRGLAVNASVAVAGVLMVPLTGGSSLGFAAGVLATTLAVASAGLDIASYVLEDVNPELARKLGTAATALGFISNAPF
RAGLRLGGRLLRWTSSRTGRLISRVESIFTKGPKLKLLTGTIKVLKPGMSSYGASNVTRWAPGKLDKFEKLENALFMTVD
KQGKRVTFMAHGVKPDDVGDAAMMAIEEYSGSGPYSGKSFSAYSFFDFLKSKKVDLNKYEKVRLIMCHSADGGEKSFAAT
FSKLTNKPVKGYEGVVDTRFGMEDSMDAFRGVRGPDQIKAVQEQLKSTPQETIKKVISNEPGFSKEGLK

Sequences:
NA

Specific function: NA

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA