Click here to switch to the map view.

The map label for this gene is hopAD1

Identifier: 28871821

GI number:

Start: 5305803

End: 5307701

Strand: Direct

Name: hopAD1

Synonym: PSPTO_4691

Alternate gene names: NA

Gene position: NA

Preceding gene: 28871820

Following gene: 28871824

Centisome position: NA

GC content: NA

Gene sequence:

>1899_bases
ATGCTTATCGGGCACAGCTTGCATCACATGCGACCCACTGCTGTGGATTCTAGCCTACCAACTTCCGCAACTAGCCAGAC
TATCAGCAATACCAAAAGTCGGCTGGATCCGCATCGTGTCCGTGAACTTACATTCATCGGAGTGGGTAGTAGTGTTGCCT
ACCTACTCAATGAGCTTAATGGTCGCTTTGCCGATAGCGGGGTAACAACGCCGTTTTTAGGAAAAGTCAGTATTGTAGGC
AAGGACGACTCTTGGGCCGAGAATGTTCGTGGGAAAGGTTATATTAACCACCAGACTGAAATTATAAGCCAATGGGACCA
ACAGGTTCCAAAATATGATCCTAACTATGCTGCTCGTGCCGAATTTTCTGCGAGTAACCGAAGACAGTTGACGCGAACAG
TGGAGTTAGGCGCAGAACATTTGAAAGCACAGGTAACAGGCATTTCGCGATTGGATGACGGTTGTTTTCGAATAAATCTG
GACAATGGCCAGATTTTGCAAAGCCGACAGATTGTACTGGGGACTGGTGCCGGACCCCATACCAGTATCTGGAACAGCGT
TACATCACACACTCAAGCAGAAAAACGACTGGACAACATCAAATTGCATGAGCAGAAAGCCTTGCGTGGCAAGGTGCTGG
ACCTGGATGAGTTTATGCGAGCGAGTGATGCCTCTCCCCAGACGTTTGCTGGAAAAACGGTGGTGATACATGGACCAAAT
GCAGGCATTGATGCAGCTGAACGTGCCGGGGAGCTTGGGGCAAATGCGGTTTGGTTTACCCGCAGTACGAATCCGGTATT
GCTGGATGGCAATCAACTAAAATTCGCGCCAGAGCTGGCCAAAAGCGCTATACATAAAGTTGACAAATTAGATATTCGCC
CAACAAAACTAGAGAATGGTTTCGCATTGCGACTACATTACAGTTCGCTAGGACAAGACTCACGGGAGCCAAAGAAGGTG
CTAGATGCGGACTATTATGTGTACGCCATGGGTCAAGATATTCATAAGCCGGGTAGCGCAGCGGCCATACTAGGCAGTCT
TCTTGACCACCTAGAACCTATATATGACTACGATCAAGTCTATAGCGACCAGCCTTTCAAGACAGTAATAGGCTTGCAAA
GTCGCGGCTCCAATAGCGATAATGGTTTAATTATTGTCGGGGCGGCAGTTGCTCAGCTGGCCACTAATGTTCAGCATAGC
TATAAGGACCACGCGTTGGATCGTATACTTGAGGAAATGACCAGGCTCCCCGAAAAGCAAACAGAAAAGCTATCACAAAT
GCTGTTAGAAGGTGCGCCATCAGTACAGATCCAGACATATCTAAAAACCTGGCAGTTAGATAGCGGTCAACCGCCAGATA
AACAGGTACTGCAGAATCAAGTAGAAAACTATCTGGCGGCCCGAGACTACTTCCAGCGGCAAACCAACGAACAAAAGGGC
AACCTGGACGGGGTTGCCGCAGAGGTAAAAAATCAAACCTTAACCGAGGTTGCATCGGTCATCGTGTCACCACAGTTAGG
CACGATCAAGGCCTCCGCTGCAGCATTGTCGGGACTTATGCCAGCATATGTGGCTAACGGCGAAAATAACTTTACCACCG
ATAATCGAACTATGCTCCGTGCCGGCATTGCAGCAAGATATCCGAATATAGGTAACGCTGAAGCCAGTGCATTTATCGAT
GAAGTAGTAACTTTGCGTCACCTTAATAGTCAGCGTTTTATTGAGAAGGTAGCAGGCGAAATGATGGACAAAGGAGCTCA
ACCACTGGTGTCGTTACGCCCCCCGGTCCTAGGTGTCCCGGCGTCGGTCAGGACTGCTTATGAGGCTTACTTGCACGCGC
TGAATTCTGGAGCGCACGATGGTACGCCGTTAAGTCAGCGCTGGCTGCCCAAAAAATAG

Upstream 100 bases:

>100_bases
TGAACCGAGAATTTCCATAGTAGTACAAAAACGGGCAGGTATTGCAAGCTCGTATTAGATCTTAATGCTTCCTAACTGAT
TTTAGAGAGAGCACCACACA

Downstream 100 bases:

>100_bases
TTCCACAGGGACAACATGGGACAGGTCGGCTAATGGCTCAACCAGCAGAATCAGTAACATCGAGGTGACTGCGCCGTATC
CGATCAACAACCCCTACGTT

Product: type III effector HopAD1

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>632_residues
MLIGHSLHHMRPTAVDSSLPTSATSQTISNTKSRLDPHRVRELTFIGVGSSVAYLLNELNGRFADSGVTTPFLGKVSIVG
KDDSWAENVRGKGYINHQTEIISQWDQQVPKYDPNYAARAEFSASNRRQLTRTVELGAEHLKAQVTGISRLDDGCFRINL
DNGQILQSRQIVLGTGAGPHTSIWNSVTSHTQAEKRLDNIKLHEQKALRGKVLDLDEFMRASDASPQTFAGKTVVIHGPN
AGIDAAERAGELGANAVWFTRSTNPVLLDGNQLKFAPELAKSAIHKVDKLDIRPTKLENGFALRLHYSSLGQDSREPKKV
LDADYYVYAMGQDIHKPGSAAAILGSLLDHLEPIYDYDQVYSDQPFKTVIGLQSRGSNSDNGLIIVGAAVAQLATNVQHS
YKDHALDRILEEMTRLPEKQTEKLSQMLLEGAPSVQIQTYLKTWQLDSGQPPDKQVLQNQVENYLAARDYFQRQTNEQKG
NLDGVAAEVKNQTLTEVASVIVSPQLGTIKASAAALSGLMPAYVANGENNFTTDNRTMLRAGIAARYPNIGNAEASAFID
EVVTLRHLNSQRFIEKVAGEMMDKGAQPLVSLRPPVLGVPASVRTAYEAYLHALNSGAHDGTPLSQRWLPKK

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA