| Definition | Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. |
|---|---|
| Accession | NC_004578 |
| Length | 6,397,126 |
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Identifier: 28870683
GI number:
Start: 3974297
End: 3976225
Strand: Direct
Name: Not Available
Synonym: PSPTO_3522
Alternate gene names: NA
Gene position: NA
Preceding gene: 28870681
Following gene: 28870686
Centisome position: NA
GC content: NA
Gene sequence:
>1929_bases ATGCGCAGTCGTTTGTTCAGCTTTTTATCGTGCCTGCTCCTCTCCACCACCGCCGTCCAGACTGCTCATGCGGTAGACCT CAACCAACAACGCAAGTATTACGACGAAGCGAAACGTGCGCTGGCCAAGGGCGATTCAGGCCCCTATCAGATGTACAGCA CGGCGCTGGCCGACTATCCGCTGGAGCCTTACCTCGAATACGACGAGTTGACCGCTCGCCTGAAAACCGCCAGCAATGCG GAAATCGAGAAGTTTCTTGCCGAGCATGGCGACCTGCCGCAGGCCAACTGGATGAAGCTGCGCTGGTTGCGCTGGCTGGC AGACCGTGGCGACTGGCAGCCCTTCGTCAAGTATTACGACCCGAAGATGAATTTCGTCGAACTGGACTGCCTGTACGGGC AGTACCAATTGAACAACAACCAGCGCGCCGAAGGTTACGCCAGCGCCGAAAAGCTATGGATGACCGGCAAAACGTTACCA GCAGCCTGTGACGGCTTTTTCGCCCAGTGGGCAGCCGCCGGCCAGCTGACCGAACAGAAGCGCTGGCAGCGGGCCAAACT GGCGGCTCAGGCGCGCAACTACAGCCTGGCCAACACGCTGGTCAACAGCCTCAATTCCCTGGCACCGCAAGGACGTCTGC TGCTGGCTGTCGCGCAGAAGCCGGACATGGTCAGCAACCCGGGGCAATTTGCGCCGGTCGATGAGGCCATGTCCGACGTG GTCGGCCTTGGCCTGCGCCGCCTGGCCAAGGACGATCCGCAAAAAGCCCTGTCGATGCTCGACGGTTACTCGGCGACCAT GCACTTTTCCCGTGAAGAGCAGGTAGAAATCGCCAAGCAAATCGGCCTGACCCTGGCACGTCGCTACGACGACCGTGCGC TTGAGGTCATGACCAAATATGATCCAGAACTGCGCGACAACACCGTGACTGAGTGGCGCTTGCGTCTGCTGTTGCGCCTC GGGCGCTGGGAAGAGGCCTACGAACTGGCGCGCCGCCTGCCCAAGGACCTCGCTGCAACCAATCGCTGGCGCTATTGGGA AGCGCGCTCCCTGGAACTGGCCCAACCCAACAGCCCGTTGATTGCCTCGCTGTACAAGGACGTCGCCAAAGAGCGTGACT TCTACGGTTTTCTGGCGGCAGACCGCACCCAGAGCCCTTATCAACTCAACAACAAACCGCTGGTGCTCAGCCAGGCGCTG ATCAACAAGGTGCGCAACACGCCAGGTGTGCGTCGCGCGCTGGAGTTTCATGATCGCGGCGAAATCGTCGACGGGCGTCG CGAGTGGTATCACGTCAGCCGCCTGTTCAGCCGTGATGAAATGGTGGCCCAGGCCAAACTGGCTTACGACCTGAAGTGGT ATTTCCCGGCCATCCGCACGATCAGTCAGGCGCAGTACTGGGATGACCTGGACATTCGCTTCCCGATGGCGCACCGCGAC ACGCTGGTGCGCGAAGCCAAGGTCCGTGGCCTGCACTCAAGCTGGGTGTTCGCCATCATCCGTCAGGAGAGCGCCTTCAT GGACGACGCTCGCTCGGGCGTCGGTGCCAGCGGCCTGATGCAACTGATGCCTGCCACCGCCAAGGAAACAGCCCGCAAGT TCAGCATTCCGCTGTCTTCCCCGCAGCAGGTGCTGGACCCGGACACCAACATTCAGCTCGGCGCTGCCTACCTGAGCTCG GTGCACGCCCAGTTCAACGGCAATCGCGTGCTCGCCTCCGCTGCCTACAACGCAGGCCCTGGGCGCGTGCGTCAATGGCT CAGGGGTGCCAACCATCTGGCCTTCGACGTCTGGGTTGAAAGCATCCCGTTCGACGAAACCCGCCAGTACGTGCAAAACG TGTTGTCTTATTCGGTGATCTACGGCCAGAAGCTCAATTCGCCACAGCCGCTGGTGGACTGGCACGAACGTTTCTTCGAC GATCTGTAA
Upstream 100 bases:
>100_bases TATTGCTACATGAGTCAAGCTTGTCGGCAATGCTTTCACCAGACGCTGGCAAAAGGCTAAGCTAGCGATACTTTTCACGA CTCATCTGCTCGGAAGTCTC
Downstream 100 bases:
>100_bases GCCGTCGACAAGGGTGCCGCGCAGAGCACCCTTGCCGCCGGACGCTGCTATTCGAGCACGTGCACCGGCATGCCCACTTC CAGCTCGCCCGGCCCGTCAT
Product: soluble lytic murein transglycosylase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>642_residues MRSRLFSFLSCLLLSTTAVQTAHAVDLNQQRKYYDEAKRALAKGDSGPYQMYSTALADYPLEPYLEYDELTARLKTASNA EIEKFLAEHGDLPQANWMKLRWLRWLADRGDWQPFVKYYDPKMNFVELDCLYGQYQLNNNQRAEGYASAEKLWMTGKTLP AACDGFFAQWAAAGQLTEQKRWQRAKLAAQARNYSLANTLVNSLNSLAPQGRLLLAVAQKPDMVSNPGQFAPVDEAMSDV VGLGLRRLAKDDPQKALSMLDGYSATMHFSREEQVEIAKQIGLTLARRYDDRALEVMTKYDPELRDNTVTEWRLRLLLRL GRWEEAYELARRLPKDLAATNRWRYWEARSLELAQPNSPLIASLYKDVAKERDFYGFLAADRTQSPYQLNNKPLVLSQAL INKVRNTPGVRRALEFHDRGEIVDGRREWYHVSRLFSRDEMVAQAKLAYDLKWYFPAIRTISQAQYWDDLDIRFPMAHRD TLVREAKVRGLHSSWVFAIIRQESAFMDDARSGVGASGLMQLMPATAKETARKFSIPLSSPQQVLDPDTNIQLGAAYLSS VHAQFNGNRVLASAAYNAGPGRVRQWLRGANHLAFDVWVESIPFDETRQYVQNVLSYSVIYGQKLNSPQPLVDWHERFFD DL
Sequences:
NA
Specific function: NA
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA