Definition Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome.
Accession NC_004578
Length 6,397,126

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Identifier: 28870129

GI number:

Start: 3316244

End: 3317929

Strand: Direct

Name: Not Available

Synonym: PSPTO_2951

Alternate gene names: NA

Gene position: NA

Preceding gene: 28870126

Following gene: 28870133

Centisome position: NA

GC content: NA

Gene sequence:

>1686_bases
GTGGGGTCACCGACTGCCGAGGAGTTGACCGGTTGTTTGTTCTTCTCGCCCGACGATGGCCGCATCTGGCTCAATGACCA
GCGCATGTTGCTGCTGCATAGCTCATCGTTCGGCACCCTGCGCCGGGAAATCATCGAGCGGCTGGGGCAGGAGCCGGCGC
GTGGGATGTTTACTCGCGCAGGCTACCTTTCCGGCGCACGTGACGCCCGGCTGATCCGTGAGCGCTGGCCACTCGCCGAC
GCCACGTCGGCGTTTCGCGCCGGCACCCACCTGCACACGCTGGAAGGCATGGCCAAGGTCGAATCGCTGCATTTCAAGTT
CGACGCAGAGTCCGGCTTTTATGAAGGCGAGTTCCTCTGGCACAACTCCTGCGAAGCTGACGAGCATCTTGCAGCGTGTG
GCACCGGGCAGGACCCGGTGTGCTGGACCGAAATCGGCTATGCAATCGGCTTTGTCAGCGGCCTGTTCGGGCAAATGGTG
ATTTTTCGCGAGGTGGAATGCCGTGGCATGGGGCACGCAAGCTGCCGGGTCATCGGCAAGACCGCCGAGCAATGGGGTGA
CGTCGAGCGTGACCTCAGTTACCTGAGCGTGGCCAAGACCGTCGCGCCGGCTCATACGCCTGCATTGGCCAACGCCCACT
ATGACGCCGGCCCGCCGACGGGCACCGACCAGCCACTGATTGGCGCCAGCGCAGCGTTCAACGCGGCCACTCAGGCCTTG
CAGCGCGTGGCGATGACCCCGGCAACCGTGCTGATCAGCGGCGAGTCCGGCGTCGGCAAAGAGATGTTCGCCCGCCAACT
GCATCAGCTCAGCCGCAACCGGGAAGGCCCGTTCGTGGCCCTCAACTGCGCAGCCATTCCCGACAATCTGATCGAGGCAG
AGCTGTTTGGCGTAGAGCGCGGGGCTTACACGGGAGCCACGCACTCAAGACCCGGACGTTTCGAGCGCGCCAATGGCGGC
ACGCTGTTTCTGGATGAAATCACCTCGCTGAGCCTGGCCGGCCAAAGCAAACTGCTGCGCGCCCTGCAGGAACGGGAAAT
AGAGCGCGTCGGTGGCGGCCACGGCATCAAAGTCAACGTGCGCGTGGTGGCGGCGACCAACGTTGATCTGCGCAAGGCCG
TGGCCGAGGGTGATTTTCGCGAAGACCTGTTTTATCGCCTGAACGTCTACCCCATCGCCCTGCCCCCGCTGCGCGAGCGT
CGCGATGACATTCCGCTGCTGATCAATGCCTTTCTCCAGCGCTTCTGCCACGAATACGGCCGCACGCCAGCAGGCTTGAC
CATGCGCGCCTTGAAAACACTGCTGCGCTACGACTTCGCCGGCAATGTGCGCGAACTGCAGAACCTCATCGAGCGCGGCC
TGATTGCCAGCGATGAAGGCCAGGCCATTGATCTGGTGCATATCTTTCGTAACGAATCACTGCCGGTGGATTCGTACTCG
CTGAACCACGACGGCGCACTGTCGAAGGCCGCTCCACCCATTGCACACACGGCACAGGGCGCCGCCTTGCTGGATACGCT
GAGTCAGGAAAAACAGGCTTTTTCGATTGAAGAGCTTGAGCAGCAGTTGATTCGCGAGGCACTGGAAAAAAGTGCAGGCA
ACCTGGCGGCGGCTTCGCGTTTGCTGGGGTTGAGCCGTGCCCAGTTTGCCTATCGTTTGAAGAAGCAGCAGCCCGACGCG
GTATGA

Upstream 100 bases:

>100_bases
TCGAGGTACAACAATGACCCGCCCTCACTCCCAGCTTCCTGACCACCGCGTGGCCACTGAACATTTCTCGCCTCGTGGCG
ACAGCAGTCTGCATGACGCC

Downstream 100 bases:

>100_bases
CGGGCGAGCGCAAGATGCGCAGCCGACCTGGCTGCGCGGCACTTATCGATCAGATCGGCAAGGTGCTGACCACGCGCAGG
GCGAGGCCTTCGTAGGCGTC

Product: sigma-54 dependent transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>561_residues
MGSPTAEELTGCLFFSPDDGRIWLNDQRMLLLHSSSFGTLRREIIERLGQEPARGMFTRAGYLSGARDARLIRERWPLAD
ATSAFRAGTHLHTLEGMAKVESLHFKFDAESGFYEGEFLWHNSCEADEHLAACGTGQDPVCWTEIGYAIGFVSGLFGQMV
IFREVECRGMGHASCRVIGKTAEQWGDVERDLSYLSVAKTVAPAHTPALANAHYDAGPPTGTDQPLIGASAAFNAATQAL
QRVAMTPATVLISGESGVGKEMFARQLHQLSRNREGPFVALNCAAIPDNLIEAELFGVERGAYTGATHSRPGRFERANGG
TLFLDEITSLSLAGQSKLLRALQEREIERVGGGHGIKVNVRVVAATNVDLRKAVAEGDFREDLFYRLNVYPIALPPLRER
RDDIPLLINAFLQRFCHEYGRTPAGLTMRALKTLLRYDFAGNVRELQNLIERGLIASDEGQAIDLVHIFRNESLPVDSYS
LNHDGALSKAAPPIAHTAQGAALLDTLSQEKQAFSIEELEQQLIREALEKSAGNLAAASRLLGLSRAQFAYRLKKQQPDA
V

Sequences:
NA

Specific function: NA

COG id: COG1221

COG function: function code KT; Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA