Definition Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome.
Accession NC_004578
Length 6,397,126

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 28869459

GI number:

Start: 2501881

End: 2504172

Strand: Direct

Name: Not Available

Synonym: PSPTO_2259

Alternate gene names: NA

Gene position: NA

Preceding gene: 28869458

Following gene: 28869460

Centisome position: NA

GC content: NA

Gene sequence:

>2292_bases
TTGAGTGATCGTGAGCTATTGCGTAGACCCTCGGAGCCCGACGTTCTTGCTGTCGGGGCCTCAGCTGCGTTTGTACGGGT
CATTCATCAGGTTGATCAGATCGCACCGACAGGCCATACGGTACTGATCACCGGGCCGTCGGGGGCAGGAAAAGAAGTCA
TCGCCCAGCGCTTGCATCGGCTTGGGGTGAACCCGCTCCATCCCTTTGTGGATATCAACTGCGCTGCATTGCCAGCACAC
CTCATTGAAGCAGAGCTATTCTGTCATAGCCGAGGTGCGTTCACCGGTGCCGTCCATACCCGTGTAGGTCACTTTGAAGC
GGCCGGTAGCGGGACGCTTTTTCTGGACGAGATCGGTGAATTGCCTCTTGCCTTGCAGCCTGTGCTGTTGAGGGTGCTGG
AGACGCGCAGCTTTCGCCCGCTGGGCAGCAACCTCGTCCGGGCTTTTCAGGGAAGGATTGTTGCGGCCACACATCGCAAC
CTTCGTGAGATGGTTGATCAAGGCCTGTTTCGTGAAGACCTCTATTACCGGCTGGCTGTTTTTGAAATCGTCTTGCCAGG
CCTGGATCAGCGTCCTGAAGATGTTGTGTTGCTCGCGCACTATTTTGCCAGCCGGCTATCCAGACCTCTGAGCTTCACCC
CGGATGCTGACGTATTGCTCGCCCGTCAGCGCTGGCCAGGGCATGCCCGTCAATTGCGCACTCTGATCGAACGCCTGAGT
GTTATGGCGGACAGCACACTTATCAGCGCAATTGTTTTACAGCCCTTTCTGGAGGTGTCTCGTTCGCAAGAACGGCTGCC
GCCACCCCGCGACATCGTTGACGACCTGATGCGTTTACCGGGCAAGGACAAGTTGGCTGCTGCCGAGCAGTTGCTCATTG
ACCGAGCGCTTCATCTCTCCAGCGGAAACAAAAGCGCAGCCGCCAAGTTACTGGGGGTCGGCCGCAAGGTAATCGAACGA
CGTCTGAGAGGGCGCGAGCGCGATTTACCCGTGCAATTTGTTTTAAAGCAAGCCAGTCAGGCAATCGCTCGGTCCGAGTT
TCAGGCCACGATTCAACTGCTTCAGGCCGCGCTGAGCCAGCGCTACAGCCAGCCGCCCAACCCTGTTGTGGGACGTCGGT
TTTTTGAGCTAAATCGGCTTATGGGGGTGTGCTATCGCGGCCTTCAGGGCTGGCTGAGCCCGGATGCCCGAGCCTGTGAT
GAAGCGGCCCTGCATGCCGGAACGGATATCTGTGAGCCCGCGGAGCTTGCTGCGCTGCAGTTCGGTGTCTGGAGCAGTCA
ACTGATGGCGCTGGATTTGCAACAAGCACGCTCTACGGCTCAGATAATGTTGCGCCGGGCGCAGGCGAGCGGCGTTCCGG
AAATGCTTGAAGAGGCTCAAATCGCCCTCGCCAATACCCTTTACTGGCTGGGCGACAACGAGCGCTGCCTGTCCATCATT
GCTCAATCGGGGTTGAGCGCTGACGTAGCGCGCAATCGCATTGGTCAGCAAGGCATCAATTTTGCCGCGCTGGCATTGAT
GCTTGAGGGGTTATCCGCGTTTCACTGTGGTCTTTTCACCCAGGCAAGGAAAGCTCTGGATGATCTGAGAGCGCTTGGAG
CCGAACGATATTCTGCTTTCAGTGACGCGGTCATTTTGCAGGGTGTGGTCTGGCTCGCCTGCCTTTTTGAAGAGGGGACG
ATAGTGGGCGACTGCGTTCAAGAGCTGATACAGGTATCGCGGGAGAACGGGTTTACCTTCTACCTCGGTGTCGGACAGAT
CTTTCAAGGTTGGCACATGGCCCAGAGATCACCCATCGAAGCTGGGCTGGCCACCATAGTGGAAGGTTACGAAAAACAGA
TGCTGCAACATGGCGGGCATTTGTTTTATTCATTCCAGATCTTGAAACGCGCCGAATTGCTGTTGCGAGATGGCCGCTTC
GAGGAGTCCGAGGCGCTGGTCACTGAGGCGTTCGGCAGGATCGATATAACGCAAGAGAAGGCCTATCAGAGTGATCTGAT
GATCATCAGGGGGCGCTCGATCCTTGCTCAGGGCAACGTGCAGGAAGCCGAGCGTGCGTTGCGCAGTGCATTGTCCATGG
CGTTTGCGGTGGGGTCGGTGTCGGCGCGAATATCCGCAGCGACATACCTCGCCACTGTGCTCATTGCCCGGGGCCAATCG
GATCAGGCATGCGAAATTCTGGATCATGCAGTCGGCGGCATTTCTGCGCATCATGCGCCCCCCATTCTGTCTCGATCTCA
CGCCCTGTTAGCCACGCTTTTGCCAACACGGATACCGGTTTCCTATAACTGA

Upstream 100 bases:

>100_bases
CAGCGTGGAGATGACTGTTTAATTCCTGGTAAAACCACGACTGCCTCGAACATGTTTCACCCCTTGCCTCGGATGGTTGA
GTTTTTCTGGAGGGATTCCC

Downstream 100 bases:

>100_bases
ACTGCAAGGATGAGAACCACGATGGCATTTGTACTCAATGGTCAGGATCTGGATGCGCTTGCGACGGGTGGGTGTTTTTT
CGGCAGTGGAGGCGGGGGCA

Product: sigma-54 dependent transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>763_residues
MSDRELLRRPSEPDVLAVGASAAFVRVIHQVDQIAPTGHTVLITGPSGAGKEVIAQRLHRLGVNPLHPFVDINCAALPAH
LIEAELFCHSRGAFTGAVHTRVGHFEAAGSGTLFLDEIGELPLALQPVLLRVLETRSFRPLGSNLVRAFQGRIVAATHRN
LREMVDQGLFREDLYYRLAVFEIVLPGLDQRPEDVVLLAHYFASRLSRPLSFTPDADVLLARQRWPGHARQLRTLIERLS
VMADSTLISAIVLQPFLEVSRSQERLPPPRDIVDDLMRLPGKDKLAAAEQLLIDRALHLSSGNKSAAAKLLGVGRKVIER
RLRGRERDLPVQFVLKQASQAIARSEFQATIQLLQAALSQRYSQPPNPVVGRRFFELNRLMGVCYRGLQGWLSPDARACD
EAALHAGTDICEPAELAALQFGVWSSQLMALDLQQARSTAQIMLRRAQASGVPEMLEEAQIALANTLYWLGDNERCLSII
AQSGLSADVARNRIGQQGINFAALALMLEGLSAFHCGLFTQARKALDDLRALGAERYSAFSDAVILQGVVWLACLFEEGT
IVGDCVQELIQVSRENGFTFYLGVGQIFQGWHMAQRSPIEAGLATIVEGYEKQMLQHGGHLFYSFQILKRAELLLRDGRF
EESEALVTEAFGRIDITQEKAYQSDLMIIRGRSILAQGNVQEAERALRSALSMAFAVGSVSARISAATYLATVLIARGQS
DQACEILDHAVGGISAHHAPPILSRSHALLATLLPTRIPVSYN

Sequences:
NA

Specific function: NA

COG id: COG2204

COG function: function code T; Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA