| Definition | Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. |
|---|---|
| Accession | NC_004578 |
| Length | 6,397,126 |
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Identifier: 28869452
GI number:
Start: 2492420
End: 2494345
Strand: Direct
Name: Not Available
Synonym: PSPTO_2250
Alternate gene names: NA
Gene position: NA
Preceding gene: 28869451
Following gene: 28869453
Centisome position: NA
GC content: NA
Gene sequence:
>1926_bases GTGCTGCCATTTGTCCAGCACGTGCCGATTTCCATCACCCTCCTGTGGCTGGGCTGCACATTCTGGCGGGTTCAGGTGTT TCGCATGCGCGCCCGGCTGCCCGGCACCTGGATCAAGTCCGGGTTGCTGGTGGGCACCGCGGGTGGCGTGTACCTGGCCC GTGGCAGCCTGGTCGGTCTGGATGCGGGCGCTGCGCTGCTGGTGGCGGCTTTCGTCCTGAAAATGCTGGAGATGAACAAC CGTCGCGACGCACGAGTGCTGATCTTCCTCGGCTTTTTTTGCGTGGCGGTTGGCTATCTGTTCGAGGACAACCTGCTGTG GGCGCTTTTCAGTTTGTTACCGGTCGGGGCGTTGCTGGCTGCGTTGATCGGCCTGCAACAATCGGATCTGGCTGGCAAAT CCGCCGATACGCTCAAGATGGCCTTCAAACTGATGGCCCAGGCCGTGCCGCTGATGCTGCTGCTGTTTGTGTTTTTTCCG CGCCTGGACCCGCTCTGGTCCTTGCCGCAACCGAGCAACAAGGGTGTCACGGGGCTGTCCGACAACATGGCGCCGGGCGA CATGGCAGAACTGAGCAAATCCCCCGCGCTGGTATTTCGTGCCAGTTTTGAGGGGCCGATGCCGGCGCGCAATCAGCTTT ACTGGCGCGGCCTGACCCTTGAGCAGTTCGACGGACGTCGCTGGTCGCAGTCGGCACGCGCGCAGACCGTGCAGGTGCCG CAGTGGGAAAAACGTGGCCCTGCGCTGGCCTACAGCATTGTCATGGAGGCCAGCGGTCGACCTTGGATGCCGAGCCTCGA CGTGGCGCAAACCACGTTGCCCGACGTGCGCCAGATGAGCGATTTTCGCCTGCAACGCAGACGGCCCATCGAGCAGTCGT TGCTGTATGCCGTCAGTTCCTGGCCGCAGAGCCTTCGCGACCCGCAGTCCAGCGAGCAGATTCAGCGGCAGAACCTGCAA CTGCCCGCCAAAGGCGATGAGCAGGCTCGCCAGTGGGCCGCTGACCTGCGCCGTCGCTATGCCAGGCCGGATGCGCTGGT TGAGGCCATGCTCGGCTATTTCAGCGACCAGCCGTTTCATTACACCCTCAAGCCTACGCCGCTGGGTAACGACAGCATTG ACGAGTTCCTGTTTGCCAGTCGCCGCGGCTTCTGCGCGCACTACGCCGGGGCCATGACCTTTGTACTGCGTGCTGCAGGC ATTCCGGCGCGGGTGGTGGCCGGGTATCAGGGCGGCGAACTGAACCCGGACGGGCAGTACCTGACGGTGCGTCAGTTCGA TGCCCACGCCTGGGTCGAATACTGGCAGCCGGGCGTGGGCTGGCGGAGTGTCGACCCGACGGCGGCCGTTGCGCCGCAAC GTATCGAACAAGGTCTGGAGCAGGCACTGGCGGCTGACGAAGCGTTCCTGCAGGATTCGCCGCTGTCAGCGCTGCGCTAT CGCAACGTGCCCTGGCTCAACACCCTGCGCCTGAGCTGGGACAACCTCAACTACGGTTGGCAGCGCTGGGTACTGGGCTA TCAGGGACAACAACAGTTACAAATTCTCGGCCGCTGGTTTTCCGGGTTTCAGGCACCGGTTTTTGTAGCGGGCATCGTGC TTTCACTGGGTTTGATTGCATTGTGGCTGTTCAAGCCATGGCAGCGCGAGAGCGATTCGCAGCTGCGCGTGTTCGGCGCA TTTGAACGCTTGCTGGCCCGCCATGGTCTGCGTCGTATGCCGGGTGAGGGCGCTGATGCGTTCTGCCGTCGTGCGGTGTT GTTCTTTCCGCAGCATGCCGAGGCTATCACCGCGTTCATTCGCGAGTTTCAGGCGCAGCGCTACGCTGGACGACTGGCCT CGGCGAGTCGCCTGAGAGAGGCGTTGAGGGCGCTGCGTCGGCGTTTGCCGTGGAGAGTGTCAGCCGTCAGGGACAGGCAT TCATGA
Upstream 100 bases:
>100_bases CATGATCAACAGGGCCGATGCCATTGCCGCCGTGTCGATAACCGCCGCGCCCATTGCGCGTGTCAGCCTCACCTGGCTGC TGTTGGCACAGGCGCTGGTG
Downstream 100 bases:
>100_bases GTCGTCTTGTCGAAGGGGAATTGCATGTCTTCAATGGTCAATCATCTGGTTGCCGAAGTGTTGGCGCTGGATGTCAAATT GCTCGCTTGTCAGGCGCGTC
Product: transglutaminase-like domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>641_residues MLPFVQHVPISITLLWLGCTFWRVQVFRMRARLPGTWIKSGLLVGTAGGVYLARGSLVGLDAGAALLVAAFVLKMLEMNN RRDARVLIFLGFFCVAVGYLFEDNLLWALFSLLPVGALLAALIGLQQSDLAGKSADTLKMAFKLMAQAVPLMLLLFVFFP RLDPLWSLPQPSNKGVTGLSDNMAPGDMAELSKSPALVFRASFEGPMPARNQLYWRGLTLEQFDGRRWSQSARAQTVQVP QWEKRGPALAYSIVMEASGRPWMPSLDVAQTTLPDVRQMSDFRLQRRRPIEQSLLYAVSSWPQSLRDPQSSEQIQRQNLQ LPAKGDEQARQWAADLRRRYARPDALVEAMLGYFSDQPFHYTLKPTPLGNDSIDEFLFASRRGFCAHYAGAMTFVLRAAG IPARVVAGYQGGELNPDGQYLTVRQFDAHAWVEYWQPGVGWRSVDPTAAVAPQRIEQGLEQALAADEAFLQDSPLSALRY RNVPWLNTLRLSWDNLNYGWQRWVLGYQGQQQLQILGRWFSGFQAPVFVAGIVLSLGLIALWLFKPWQRESDSQLRVFGA FERLLARHGLRRMPGEGADAFCRRAVLFFPQHAEAITAFIREFQAQRYAGRLASASRLREALRALRRRLPWRVSAVRDRH S
Sequences:
NA
Specific function: NA
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA