Click here to switch to the map view.

The map label for this gene is 28379758

Identifier: 28379758

GI number: 28379758

Start: 3041615

End: 3042193

Strand: Direct

Name: 28379758

Synonym: lp_3429

Alternate gene names: NA

Gene position: 3041615-3042193 (Clockwise)

Preceding gene: 28379754

Following gene: 28379759

Centisome position: 91.94

GC content: 42.83

Gene sequence:

>579_bases
ATGACAAAATTAATTATGAACAATCAATTGCATATTGATCAGCGAACTCATCAAACTCATCGTAAATTGATTACTGCCCT
GCAAGCGAATTTCAAGGCTCAAAAGATCTTCAACGAGTTAACTGTCAAACAACTTTGTCTGGATGCTCACGTTGGACGTG
CCACTTTTTATCGCCATCACCAGGATATTGAAGATATCATTGTGATTGAATACTTAATTGCCTTACAACAGTTAGGACAA
GCGTTAAATGACTTAACTACCACATCTTACGCGACCATTGCTGGTGCAATCGTCACGACGCTTCGCGCGCATCTGGATCT
CCCCTTACTCGTGTCATGGGCACAGTGTCGCGATCGGGTCATCCCATTAGAAGTTGGTTTTGCCCAACAGCTGCTAACTA
GCTTAGCCATCCATCCTAAGCAACGGCATTTTATGGCAACTTATCTCGGCAACTGTCTTCATCAGTTAGCTTGGCAACTT
GCGACCACGCAGCCAACACTCAGCAGAATTGAGACTTACCGGCTATTTATTCAATTAATTCCTAATGTCTTACAAGCACC
AACAATTCCAACTGACTAA

Upstream 100 bases:

>100_bases
TTGGTCAGCTATATCTAACTGTGACAGCTATTATAGACGCTTTCACATGCTAAAAAAGGGACGTTTTGAGACATATCACA
AGTTGGTGTATCATTGACAT

Downstream 100 bases:

>100_bases
TCCGTTTAGTTATCATGATACACACCACGGTAGTTTGGCCGCCTGTCCCTGATGGTGGCGAATGTCGTCATTATTCACCC
CCGCCGTTTGCCTTTATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MTKLIMNNQLHIDQRTHQTHRKLITALQANFKAQKIFNELTVKQLCLDAHVGRATFYRHHQDIEDIIVIEYLIALQQLGQ
ALNDLTTTSYATIAGAIVTTLRAHLDLPLLVSWAQCRDRVIPLEVGFAQQLLTSLAIHPKQRHFMATYLGNCLHQLAWQL
ATTQPTLSRIETYRLFIQLIPNVLQAPTIPTD

Sequences:

>Translated_192_residues
MTKLIMNNQLHIDQRTHQTHRKLITALQANFKAQKIFNELTVKQLCLDAHVGRATFYRHHQDIEDIIVIEYLIALQQLGQ
ALNDLTTTSYATIAGAIVTTLRAHLDLPLLVSWAQCRDRVIPLEVGFAQQLLTSLAIHPKQRHFMATYLGNCLHQLAWQL
ATTQPTLSRIETYRLFIQLIPNVLQAPTIPTD
>Mature_191_residues
TKLIMNNQLHIDQRTHQTHRKLITALQANFKAQKIFNELTVKQLCLDAHVGRATFYRHHQDIEDIIVIEYLIALQQLGQA
LNDLTTTSYATIAGAIVTTLRAHLDLPLLVSWAQCRDRVIPLEVGFAQQLLTSLAIHPKQRHFMATYLGNCLHQLAWQLA
TTQPTLSRIETYRLFIQLIPNVLQAPTIPTD

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21908; Mature: 21777

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLIMNNQLHIDQRTHQTHRKLITALQANFKAQKIFNELTVKQLCLDAHVGRATFYRHH
CCCEEECCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QDIEDIIVIEYLIALQQLGQALNDLTTTSYATIAGAIVTTLRAHLDLPLLVSWAQCRDRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
IPLEVGFAQQLLTSLAIHPKQRHFMATYLGNCLHQLAWQLATTQPTLSRIETYRLFIQLI
CCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
PNVLQAPTIPTD
HHHHHCCCCCCC
>Mature Secondary Structure 
TKLIMNNQLHIDQRTHQTHRKLITALQANFKAQKIFNELTVKQLCLDAHVGRATFYRHH
CCEEECCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QDIEDIIVIEYLIALQQLGQALNDLTTTSYATIAGAIVTTLRAHLDLPLLVSWAQCRDRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
IPLEVGFAQQLLTSLAIHPKQRHFMATYLGNCLHQLAWQLATTQPTLSRIETYRLFIQLI
CCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
PNVLQAPTIPTD
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA