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The map label for this gene is 28379725

Identifier: 28379725

GI number: 28379725

Start: 3005702

End: 3006082

Strand: Direct

Name: 28379725

Synonym: lp_3389

Alternate gene names: NA

Gene position: 3005702-3006082 (Clockwise)

Preceding gene: 28379710

Following gene: 28379726

Centisome position: 90.85

GC content: 32.02

Gene sequence:

>381_bases
ATGTCTATCGTTTCTCTCGCAAAACAAAGTGGTTTATCGGTTTCATCAATAAGCGCCTATGAAAACAACAAAAGGCAGCC
AAAAATTGAATCACTTCAAAAAATATCTAAAGTTCTTGGTGTATCATCAGCATATTTAAATGGCATGTCAGAAGAAAAAA
ATATTCTCAATGTAAATTCTCAAAGCCTGAAAAACAACACAATAGACATTGATGTTATAGGTTTTTTATTAAACGTACGA
TCAACTTACCCCGGTAAAGTTCCTATTTTTATTCAGGATGTACTAGCCGGAGCGCCTATCTATATCGATGATAATGGCAA
TAAACTAGACGCAAAAAAAAGAAAACTTTTAATTACATTTCTCAAAACACTCTTAAACTAA

Upstream 100 bases:

>100_bases
GTCAAGCACATTTGTAGAATAATAGCCGTAAAGTACAAATAAATGTAGAATAGTGGTGAACTCATTGAATAATATACGAA
TAGCTCGTAAAGCTAAAAAT

Downstream 100 bases:

>100_bases
TTAGCCTTTACATACTTGCCCGCCAGCTGGTATGAAAGGAATAATCAATATGGCTACATTCAAGCAGTATAAAACTAAAT
CTGGTGCTTTCTGGGAGGCT

Product: prophage Lp4 protein 2, CI-like repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MSIVSLAKQSGLSVSSISAYENNKRQPKIESLQKISKVLGVSSAYLNGMSEEKNILNVNSQSLKNNTIDIDVIGFLLNVR
STYPGKVPIFIQDVLAGAPIYIDDNGNKLDAKKRKLLITFLKTLLN

Sequences:

>Translated_126_residues
MSIVSLAKQSGLSVSSISAYENNKRQPKIESLQKISKVLGVSSAYLNGMSEEKNILNVNSQSLKNNTIDIDVIGFLLNVR
STYPGKVPIFIQDVLAGAPIYIDDNGNKLDAKKRKLLITFLKTLLN
>Mature_125_residues
SIVSLAKQSGLSVSSISAYENNKRQPKIESLQKISKVLGVSSAYLNGMSEEKNILNVNSQSLKNNTIDIDVIGFLLNVRS
TYPGKVPIFIQDVLAGAPIYIDDNGNKLDAKKRKLLITFLKTLLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13825; Mature: 13694

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVSLAKQSGLSVSSISAYENNKRQPKIESLQKISKVLGVSSAYLNGMSEEKNILNVNS
CCHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCC
QSLKNNTIDIDVIGFLLNVRSTYPGKVPIFIQDVLAGAPIYIDDNGNKLDAKKRKLLITF
HHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHH
LKTLLN
HHHHCC
>Mature Secondary Structure 
SIVSLAKQSGLSVSSISAYENNKRQPKIESLQKISKVLGVSSAYLNGMSEEKNILNVNS
CHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCC
QSLKNNTIDIDVIGFLLNVRSTYPGKVPIFIQDVLAGAPIYIDDNGNKLDAKKRKLLITF
HHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHH
LKTLLN
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA