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The map label for this gene is crtM [H]

Identifier: 28379633

GI number: 28379633

Start: 2903201

End: 2904082

Strand: Direct

Name: crtM [H]

Synonym: lp_3263

Alternate gene names: 28379633

Gene position: 2903201-2904082 (Clockwise)

Preceding gene: 28379632

Following gene: 28379634

Centisome position: 87.76

GC content: 45.24

Gene sequence:

>882_bases
ATGACCAAACTAATGCCTAAATTCGAACAACATCGCACTGACTTTGCGTACTGTCAAACAATTACTAAAAGGTCTTCTAG
CGCATTCTACACCGCCTTCTCGCAATTACCACTAGAACGCGCTTGGAGTATTTACGCCGTTTATGCTTTTTGTCGAACAG
CCGACGACCTCGTTGATGTTGACCATGATATTGATGGTCTAATGGCATTGCGCCAATCATTGACCACCTTTGCCAATGGT
CATGTCCCAGACCACCCAATGTGGCGCGCACTGGCCGTCGTTTTTGAGACTTATGATATGAATCTTGACGTCTTTTTCGA
TATGCTCACTGGTCAAGAACAAGACGCGACTTTTAAACAACCTCAAACTCAGCAAGCACTTGAAGACTATTGCTATTACG
TCGCCGGATCGGTTGGTCTGATGATTTTGCCAATGCTAGCAACTAACCCGCAATCACTTGTCAAACCAGCCGTAGAATTA
GGCAGCGCCATGCAACTCACCAATATTTTAAGAGATGTTGGTGAAGACTACCAACGTGGCCGAATCTACCTGCCATCAAA
ACTATTGGCACACTATCAGCTCAATCCAACTGACTTGCATGGCCCCATCCCATCTGCCAATTTTATTCGGCTTTGGGAAC
ATGAAGCACAGATTGCCATGAACAAGTACGAGGCTGCATTAACCATGATGCCACAAATTGATCCCGTCGCCCGGCCATCG
CTATTAGCCGCCACTTTGCTTTATCGTGAATTATTGCTAATCGCACGTGAACAACACTACCCAATTTTAAGTCAGCGCGT
CTTTTTGACAGATGAACGTAAAACACAGGTCCTTAATCAAGTTAGCACTAAAGTGCATGAACTAGCCCTTAAGGAGGCTT
AA

Upstream 100 bases:

>100_bases
GCCGACCATCTTTATTTTTGTGGTAGTAGCACCCACCCTGGGGCCGGTGTTCCCATTGTTATGCAAAGTGCTAAATTAGC
CGTTGAGGAGTTGATTAAAG

Downstream 100 bases:

>100_bases
TGCGACTTGAATCGGTATCATACTTGGCACGACGAAATCTGTCCATACCGGAATATTGACCACCCACAAATAATTTTTAG
TTTTTTCACCAGTCAAGTAA

Product: phytoene synthase

Products: NA

Alternate protein names: 4,4'-diapophytoene synthase; DAP synthase; Diapophytoene synthase [H]

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MTKLMPKFEQHRTDFAYCQTITKRSSSAFYTAFSQLPLERAWSIYAVYAFCRTADDLVDVDHDIDGLMALRQSLTTFANG
HVPDHPMWRALAVVFETYDMNLDVFFDMLTGQEQDATFKQPQTQQALEDYCYYVAGSVGLMILPMLATNPQSLVKPAVEL
GSAMQLTNILRDVGEDYQRGRIYLPSKLLAHYQLNPTDLHGPIPSANFIRLWEHEAQIAMNKYEAALTMMPQIDPVARPS
LLAATLLYRELLLIAREQHYPILSQRVFLTDERKTQVLNQVSTKVHELALKEA

Sequences:

>Translated_293_residues
MTKLMPKFEQHRTDFAYCQTITKRSSSAFYTAFSQLPLERAWSIYAVYAFCRTADDLVDVDHDIDGLMALRQSLTTFANG
HVPDHPMWRALAVVFETYDMNLDVFFDMLTGQEQDATFKQPQTQQALEDYCYYVAGSVGLMILPMLATNPQSLVKPAVEL
GSAMQLTNILRDVGEDYQRGRIYLPSKLLAHYQLNPTDLHGPIPSANFIRLWEHEAQIAMNKYEAALTMMPQIDPVARPS
LLAATLLYRELLLIAREQHYPILSQRVFLTDERKTQVLNQVSTKVHELALKEA
>Mature_292_residues
TKLMPKFEQHRTDFAYCQTITKRSSSAFYTAFSQLPLERAWSIYAVYAFCRTADDLVDVDHDIDGLMALRQSLTTFANGH
VPDHPMWRALAVVFETYDMNLDVFFDMLTGQEQDATFKQPQTQQALEDYCYYVAGSVGLMILPMLATNPQSLVKPAVELG
SAMQLTNILRDVGEDYQRGRIYLPSKLLAHYQLNPTDLHGPIPSANFIRLWEHEAQIAMNKYEAALTMMPQIDPVARPSL
LAATLLYRELLLIAREQHYPILSQRVFLTDERKTQVLNQVSTKVHELALKEA

Specific function: Catalyzes the head-to-head condensation of two molecules of farnesyl diphosphate (FPP) into the colorless C(30) carotenoid dehydrosqualene (4,4'-diapophytoene). This is the initial step in the biosynthesis of staphyloxanthin, an orange carotenoid present

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family. CrtM subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: NA

Molecular weight: Translated: 33454; Mature: 33323

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLMPKFEQHRTDFAYCQTITKRSSSAFYTAFSQLPLERAWSIYAVYAFCRTADDLVDV
CCCCCCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
DHDIDGLMALRQSLTTFANGHVPDHPMWRALAVVFETYDMNLDVFFDMLTGQEQDATFKQ
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
PQTQQALEDYCYYVAGSVGLMILPMLATNPQSLVKPAVELGSAMQLTNILRDVGEDYQRG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
RIYLPSKLLAHYQLNPTDLHGPIPSANFIRLWEHEAQIAMNKYEAALTMMPQIDPVARPS
EEECCHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
LLAATLLYRELLLIAREQHYPILSQRVFLTDERKTQVLNQVSTKVHELALKEA
HHHHHHHHHHHHHHHHHCCCCHHHCEEEECCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TKLMPKFEQHRTDFAYCQTITKRSSSAFYTAFSQLPLERAWSIYAVYAFCRTADDLVDV
CCCCCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
DHDIDGLMALRQSLTTFANGHVPDHPMWRALAVVFETYDMNLDVFFDMLTGQEQDATFKQ
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
PQTQQALEDYCYYVAGSVGLMILPMLATNPQSLVKPAVELGSAMQLTNILRDVGEDYQRG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
RIYLPSKLLAHYQLNPTDLHGPIPSANFIRLWEHEAQIAMNKYEAALTMMPQIDPVARPS
EEECCHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
LLAATLLYRELLLIAREQHYPILSQRVFLTDERKTQVLNQVSTKVHELALKEA
HHHHHHHHHHHHHHHHHCCCCHHHCEEEECCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA