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The map label for this gene is yisX [H]

Identifier: 28379248

GI number: 28379248

Start: 2453752

End: 2454387

Strand: Direct

Name: yisX [H]

Synonym: lp_2760

Alternate gene names: 28379248

Gene position: 2453752-2454387 (Clockwise)

Preceding gene: 28379247

Following gene: 28379254

Centisome position: 74.17

GC content: 46.7

Gene sequence:

>636_bases
ATGCAAGATCCCCGCATTATCCCAGCAGAATTAACGACTGGCGCTTTTTTCGATATTTTAGCAGATGAGGACCACAGCTT
AAGTTATATTCAGGTTAGTGAAGAAGACGTGAGTCACCAGCACATCGATCACCCCATGCTGGATCACGTGCACTTCGAAA
ATGTCCGGTTTACGGCCAGTCAATTCGAACGGCTTGACTTGACCGATGCCGTCTTTATCAATTGTGACTTTTCTAATTGC
CAGTTTGAAAAAGCCAGCTGGCTACGTGTTCAATTCAAAGATTGTAAGCTCGTCGGTGTCGATTTGAACGAGGCTGCCCT
CAATAACGTCGCCTTTGACCACTGTCAGCTCGACTTAGCCATGCTGTGCGACATGCGGTTCAAAACCGTGACCTTTGATC
ACTGTCGGCTGAATGGGGCCAGCTTTATGAACAATCGACTAACGACCGTCAAGTTTAACGAAACCAACCTTGACCAAGTC
GCTTTCAACGATACCGCCCTCAAAAATATTGACCTAAGTACCTGTCAATTCGAGCGTCTCGAACTTGATACTGCCGCAGC
ACGCGGTATGATCGTCAATATTGATCAGGCTGCTTATTTGGCTGCTGCTTTAAACGGCATCAAAGTTAAACCCTGA

Upstream 100 bases:

>100_bases
CCGTTTTCCTAGAAAATTACTTCAACTGATCCCAAACTGAAGCCTGTAACGGGCTTCTTTTTTAGCACAACAACTCAAAA
TCAAACTAACGAGGTGTCCC

Downstream 100 bases:

>100_bases
TACCGGTGGAACAGTCACCGTATGAGTGACCAACTCACAATGCCAAGGACGATTAAGCTGCTGGCTGGTAAATCTTCTAA
TAACACTGCACGTATCTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MQDPRIIPAELTTGAFFDILADEDHSLSYIQVSEEDVSHQHIDHPMLDHVHFENVRFTASQFERLDLTDAVFINCDFSNC
QFEKASWLRVQFKDCKLVGVDLNEAALNNVAFDHCQLDLAMLCDMRFKTVTFDHCRLNGASFMNNRLTTVKFNETNLDQV
AFNDTALKNIDLSTCQFERLELDTAAARGMIVNIDQAAYLAAALNGIKVKP

Sequences:

>Translated_211_residues
MQDPRIIPAELTTGAFFDILADEDHSLSYIQVSEEDVSHQHIDHPMLDHVHFENVRFTASQFERLDLTDAVFINCDFSNC
QFEKASWLRVQFKDCKLVGVDLNEAALNNVAFDHCQLDLAMLCDMRFKTVTFDHCRLNGASFMNNRLTTVKFNETNLDQV
AFNDTALKNIDLSTCQFERLELDTAAARGMIVNIDQAAYLAAALNGIKVKP
>Mature_211_residues
MQDPRIIPAELTTGAFFDILADEDHSLSYIQVSEEDVSHQHIDHPMLDHVHFENVRFTASQFERLDLTDAVFINCDFSNC
QFEKASWLRVQFKDCKLVGVDLNEAALNNVAFDHCQLDLAMLCDMRFKTVTFDHCRLNGASFMNNRLTTVKFNETNLDQV
AFNDTALKNIDLSTCQFERLELDTAAARGMIVNIDQAAYLAAALNGIKVKP

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646
- InterPro:   IPR012334 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 23925; Mature: 23925

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDPRIIPAELTTGAFFDILADEDHSLSYIQVSEEDVSHQHIDHPMLDHVHFENVRFTAS
CCCCCEECCCCCCCEEEEEECCCCCCEEEEEECCCCCCHHHCCCCHHHCEEECCEEEEHH
QFERLDLTDAVFINCDFSNCQFEKASWLRVQFKDCKLVGVDLNEAALNNVAFDHCQLDLA
HHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCEEEEEECCHHHHHCEEHHHHEEEHH
MLCDMRFKTVTFDHCRLNGASFMNNRLTTVKFNETNLDQVAFNDTALKNIDLSTCQFERL
HHCCCCEEEEEEEHEECCCCHHHCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEE
ELDTAAARGMIVNIDQAAYLAAALNGIKVKP
EECHHHHCCEEEEECHHHHHHHHHCCEEECC
>Mature Secondary Structure
MQDPRIIPAELTTGAFFDILADEDHSLSYIQVSEEDVSHQHIDHPMLDHVHFENVRFTAS
CCCCCEECCCCCCCEEEEEECCCCCCEEEEEECCCCCCHHHCCCCHHHCEEECCEEEEHH
QFERLDLTDAVFINCDFSNCQFEKASWLRVQFKDCKLVGVDLNEAALNNVAFDHCQLDLA
HHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCEEEEEECCHHHHHCEEHHHHEEEHH
MLCDMRFKTVTFDHCRLNGASFMNNRLTTVKFNETNLDQVAFNDTALKNIDLSTCQFERL
HHCCCCEEEEEEEHEECCCCHHHCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEE
ELDTAAARGMIVNIDQAAYLAAALNGIKVKP
EECHHHHCCEEEEECHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]