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The map label for this gene is yvcS [H]

Identifier: 28379232

GI number: 28379232

Start: 2438702

End: 2440483

Strand: Direct

Name: yvcS [H]

Synonym: lp_2740

Alternate gene names: 28379232

Gene position: 2438702-2440483 (Clockwise)

Preceding gene: 28379231

Following gene: 28379233

Centisome position: 73.72

GC content: 42.59

Gene sequence:

>1782_bases
ATGTTAACTAAACTTGCCATGACCGGCTTCAAACACCGTTGGCGCGACTACCTCGTTCTCTTTTCAGGACTGATCATGTC
TAGCGCAATCTTCTATATGTTTGAAGCACTGGCCACTAACCAAGATTTCTTAAAACAAAATACGAGTATTAGTATGGTCG
GCCTCATCTTCCAATTTGGTTCCGTACTACTCACAATCATCACATTAGTCTACATTGGCTATGCTAACTCATTCTTATTA
AGTATGCGTAAGCGAGACTACGGGCTCTTCATGCTCGTTGGTGCACGCAAAAGTAAGATTGGTCAATTAATTTGGCTGGA
AACACTACTTGTCGGTATCACTGCAACCATTGTCGGCATTCTTGTGGGAACAGCCTTAACTGTCGGCGTAAGCCAGATTC
TGATTAACAGTCTAGGCCTGACGCTTCACCATTTTACAGCCTGGTACACGCCAGCTGCCATTGCGACACTGTTACTCTAC
GTTGGATTGTTCTTAATTGCCGGTTTATTCAACCTGCTATCCCTGACCAAGACACCAGCCTTGAAATTACTACACAGTAA
TGATCAACCTAACCGGCCACAACTAAAACCAGCCCGTCAACTCATCGAAATTGTCGTCGGTGTCATTTCAATTGCAATTG
GTTACTGGTCAATGGCTAACCTGAAAATTTTGCAACTGATGGGAATTGGAATTGCGCTCGTCACAATTGTTCTTGGAACT
TATCTGCTGTTTAACGCTATTTTTGTCTGGTTAATGGTCGCACTCAAACGATTCTCATTTGCCCAACGTGGTTTGAATGG
CTTCACCTTATCACAGCTAAGCTTTAGAATTCGTAATTACACTAAGATGCTGTCAATTGTCGCAATGCTATTCGCACTAG
CTCTCGGCGCAATTACAGTTGGAATGGGCTTTCACAGTCAAATTCCATCAATGGCTAATATTAATAACGCTTATGATATG
GGACTGGTCAACGCTAGTACCGCTGAAAAAGCACAAATTGCAGCGATGAAGCCCAAGACAACGGCGACCTATCATTTCAA
AGCAACCAAGAAAGTCGTTTATTTCCAAGCTGCTGAATTCAATCGGCAACCATTCACGACTATTCATACTCGCAATAAGA
ATCAACTGACTTTTAATACCGTTCATAATAATGCGGCTAAATTACAAAAATCAGAAGATAATTATCAACTGATGCAGCTT
CAGAGTGGTGTCATGGCAACCGCAACACCCGTATTTTTATCAAAAACGGCGTACGCGAAACTTGCCCAGCCTGAACAGCG
ACTAACTGTGTTTACTACCAACAACGTTATCGAACATCGCGTTGCATTGAACAAACTGGCCAAACATCACTTTCACACTA
CCAGCCCTGAACAATTTGGAGGTCGCTATGCGATGTATCTAATGGTTAACGGCATGTACTCCGGGCTGGAATTTATGGGT
ATGTTCCTCGGAATCGCCTTTCTTGCAATGCTAGCTAGTTGCCTGATGTTCAAGATTCTGTCTGGTGCCGATGCTGATCA
ACACCGTTACAAGATGATCGATAAAGTTGGAACCACTAGACGCCAGCTCAACGGTGCCATTAACAAAGAAATTGCTGTGC
TCTTTATTCTTCCTGGAATCGTTGGTATTGTACACGTCTTGTTTGGGTTACAAATGTTCAAAATCATAATGGTTACCTCA
CCATATACCGGAATTTGGTTACCATTCTTGATTTTTGCCGGTCTCTACCTACTTTACTATCTCATTACGATCACCATCTA
TCGGCGAATCGTTTTACAATAA

Upstream 100 bases:

>100_bases
ACGTGGGGATTTAAGCCGCAGTGATTTTTATCAACAAGTCCTCGACAACCTAGGGACGTTTGAACAGTAAGCCGAAACAG
TAAAAGGAGTCCTTTAAACT

Downstream 100 bases:

>100_bases
CCTTTCGGAGGAGGGAAAAATCATGGTATACTTTGGATTAGTCGCTTTATTAATCGTTATTACACCATTACACCGTTACG
TGCTCGCAAGTCGTCGTCAA

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MLTKLAMTGFKHRWRDYLVLFSGLIMSSAIFYMFEALATNQDFLKQNTSISMVGLIFQFGSVLLTIITLVYIGYANSFLL
SMRKRDYGLFMLVGARKSKIGQLIWLETLLVGITATIVGILVGTALTVGVSQILINSLGLTLHHFTAWYTPAAIATLLLY
VGLFLIAGLFNLLSLTKTPALKLLHSNDQPNRPQLKPARQLIEIVVGVISIAIGYWSMANLKILQLMGIGIALVTIVLGT
YLLFNAIFVWLMVALKRFSFAQRGLNGFTLSQLSFRIRNYTKMLSIVAMLFALALGAITVGMGFHSQIPSMANINNAYDM
GLVNASTAEKAQIAAMKPKTTATYHFKATKKVVYFQAAEFNRQPFTTIHTRNKNQLTFNTVHNNAAKLQKSEDNYQLMQL
QSGVMATATPVFLSKTAYAKLAQPEQRLTVFTTNNVIEHRVALNKLAKHHFHTTSPEQFGGRYAMYLMVNGMYSGLEFMG
MFLGIAFLAMLASCLMFKILSGADADQHRYKMIDKVGTTRRQLNGAINKEIAVLFILPGIVGIVHVLFGLQMFKIIMVTS
PYTGIWLPFLIFAGLYLLYYLITITIYRRIVLQ

Sequences:

>Translated_593_residues
MLTKLAMTGFKHRWRDYLVLFSGLIMSSAIFYMFEALATNQDFLKQNTSISMVGLIFQFGSVLLTIITLVYIGYANSFLL
SMRKRDYGLFMLVGARKSKIGQLIWLETLLVGITATIVGILVGTALTVGVSQILINSLGLTLHHFTAWYTPAAIATLLLY
VGLFLIAGLFNLLSLTKTPALKLLHSNDQPNRPQLKPARQLIEIVVGVISIAIGYWSMANLKILQLMGIGIALVTIVLGT
YLLFNAIFVWLMVALKRFSFAQRGLNGFTLSQLSFRIRNYTKMLSIVAMLFALALGAITVGMGFHSQIPSMANINNAYDM
GLVNASTAEKAQIAAMKPKTTATYHFKATKKVVYFQAAEFNRQPFTTIHTRNKNQLTFNTVHNNAAKLQKSEDNYQLMQL
QSGVMATATPVFLSKTAYAKLAQPEQRLTVFTTNNVIEHRVALNKLAKHHFHTTSPEQFGGRYAMYLMVNGMYSGLEFMG
MFLGIAFLAMLASCLMFKILSGADADQHRYKMIDKVGTTRRQLNGAINKEIAVLFILPGIVGIVHVLFGLQMFKIIMVTS
PYTGIWLPFLIFAGLYLLYYLITITIYRRIVLQ
>Mature_593_residues
MLTKLAMTGFKHRWRDYLVLFSGLIMSSAIFYMFEALATNQDFLKQNTSISMVGLIFQFGSVLLTIITLVYIGYANSFLL
SMRKRDYGLFMLVGARKSKIGQLIWLETLLVGITATIVGILVGTALTVGVSQILINSLGLTLHHFTAWYTPAAIATLLLY
VGLFLIAGLFNLLSLTKTPALKLLHSNDQPNRPQLKPARQLIEIVVGVISIAIGYWSMANLKILQLMGIGIALVTIVLGT
YLLFNAIFVWLMVALKRFSFAQRGLNGFTLSQLSFRIRNYTKMLSIVAMLFALALGAITVGMGFHSQIPSMANINNAYDM
GLVNASTAEKAQIAAMKPKTTATYHFKATKKVVYFQAAEFNRQPFTTIHTRNKNQLTFNTVHNNAAKLQKSEDNYQLMQL
QSGVMATATPVFLSKTAYAKLAQPEQRLTVFTTNNVIEHRVALNKLAKHHFHTTSPEQFGGRYAMYLMVNGMYSGLEFMG
MFLGIAFLAMLASCLMFKILSGADADQHRYKMIDKVGTTRRQLNGAINKEIAVLFILPGIVGIVHVLFGLQMFKIIMVTS
PYTGIWLPFLIFAGLYLLYYLITITIYRRIVLQ

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 66209; Mature: 66209

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKLAMTGFKHRWRDYLVLFSGLIMSSAIFYMFEALATNQDFLKQNTSISMVGLIFQFG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHH
SVLLTIITLVYIGYANSFLLSMRKRDYGLFMLVGARKSKIGQLIWLETLLVGITATIVGI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
LVGTALTVGVSQILINSLGLTLHHFTAWYTPAAIATLLLYVGLFLIAGLFNLLSLTKTPA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LKLLHSNDQPNRPQLKPARQLIEIVVGVISIAIGYWSMANLKILQLMGIGIALVTIVLGT
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
YLLFNAIFVWLMVALKRFSFAQRGLNGFTLSQLSFRIRNYTKMLSIVAMLFALALGAITV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMGFHSQIPSMANINNAYDMGLVNASTAEKAQIAAMKPKTTATYHFKATKKVVYFQAAEF
CCCCHHCCCCHHCCCCCHHCCCCCCCCHHHHHHEEECCCCCEEEEEEECCEEEEEEEHHC
NRQPFTTIHTRNKNQLTFNTVHNNAAKLQKSEDNYQLMQLQSGVMATATPVFLSKTAYAK
CCCCCCEEEECCCCCEEEEEHHCCHHHCCCCCCCHHHHHHHCCCHHHCCHHHHHHHHHHH
LAQPEQRLTVFTTNNVIEHRVALNKLAKHHFHTTSPEQFGGRYAMYLMVNGMYSGLEFMG
HCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEEHHHHHHHHHHH
MFLGIAFLAMLASCLMFKILSGADADQHRYKMIDKVGTTRRQLNGAINKEIAVLFILPGI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VGIVHVLFGLQMFKIIMVTSPYTGIWLPFLIFAGLYLLYYLITITIYRRIVLQ
HHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTKLAMTGFKHRWRDYLVLFSGLIMSSAIFYMFEALATNQDFLKQNTSISMVGLIFQFG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHH
SVLLTIITLVYIGYANSFLLSMRKRDYGLFMLVGARKSKIGQLIWLETLLVGITATIVGI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
LVGTALTVGVSQILINSLGLTLHHFTAWYTPAAIATLLLYVGLFLIAGLFNLLSLTKTPA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LKLLHSNDQPNRPQLKPARQLIEIVVGVISIAIGYWSMANLKILQLMGIGIALVTIVLGT
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
YLLFNAIFVWLMVALKRFSFAQRGLNGFTLSQLSFRIRNYTKMLSIVAMLFALALGAITV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMGFHSQIPSMANINNAYDMGLVNASTAEKAQIAAMKPKTTATYHFKATKKVVYFQAAEF
CCCCHHCCCCHHCCCCCHHCCCCCCCCHHHHHHEEECCCCCEEEEEEECCEEEEEEEHHC
NRQPFTTIHTRNKNQLTFNTVHNNAAKLQKSEDNYQLMQLQSGVMATATPVFLSKTAYAK
CCCCCCEEEECCCCCEEEEEHHCCHHHCCCCCCCHHHHHHHCCCHHHCCHHHHHHHHHHH
LAQPEQRLTVFTTNNVIEHRVALNKLAKHHFHTTSPEQFGGRYAMYLMVNGMYSGLEFMG
HCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEEHHHHHHHHHHH
MFLGIAFLAMLASCLMFKILSGADADQHRYKMIDKVGTTRRQLNGAINKEIAVLFILPGI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VGIVHVLFGLQMFKIIMVTSPYTGIWLPFLIFAGLYLLYYLITITIYRRIVLQ
HHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]