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The map label for this gene is ybbI [C]

Identifier: 28379183

GI number: 28379183

Start: 2378141

End: 2378518

Strand: Direct

Name: ybbI [C]

Synonym: lp_2676

Alternate gene names: 28379183

Gene position: 2378141-2378518 (Clockwise)

Preceding gene: 28379180

Following gene: 28379184

Centisome position: 71.88

GC content: 44.97

Gene sequence:

>378_bases
ATGAGACTTTTCACCATTCCAGCCGAACAAACGGCATTTAGTACCAAAGAGGTTGTCGCCATCACCGGTATGACCAAGGA
TGCCCTCCGTTATTATGAACAACAACGGTTGATTGGGCCCGTACCACGCAACCACAACAACTACCGACAGTATTCACGTC
AAAATTTAGAGCGTCTACAATTCGTTGCCACTTTTCGGCAATTAGGCCTTGATCTAAAACTACTCAGCGGTGACGGCCAC
ATTCCAAACCGGGCCCAGCGAATCCAAGAACTGAGCTCATATCGTGCTACTGTGAAAAAGCAAATCGCTCAATTACAGGC
AACTGATCAGTTTTTAGCACATAAGATTGCTTACTTTGAAGCTTCTCCAAATCATTAA

Upstream 100 bases:

>100_bases
TAAATGCGGCCCCCACTCGGCGGAGCCGTTTCATCCGTTTTAGTATTGTTCCGAGAAGCACTGACCACGTGTATACTAAA
GTCAAAAAGGAGCAATTGAC

Downstream 100 bases:

>100_bases
CCAACTTTTTTACTTTTTACTTGCTATCGTGTGGACACCATAGTTTATACTAACGGCACACTTAATCAAAGAAGGTTACG
ATATTATGAAAACAATTGCT

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MRLFTIPAEQTAFSTKEVVAITGMTKDALRYYEQQRLIGPVPRNHNNYRQYSRQNLERLQFVATFRQLGLDLKLLSGDGH
IPNRAQRIQELSSYRATVKKQIAQLQATDQFLAHKIAYFEASPNH

Sequences:

>Translated_125_residues
MRLFTIPAEQTAFSTKEVVAITGMTKDALRYYEQQRLIGPVPRNHNNYRQYSRQNLERLQFVATFRQLGLDLKLLSGDGH
IPNRAQRIQELSSYRATVKKQIAQLQATDQFLAHKIAYFEASPNH
>Mature_125_residues
MRLFTIPAEQTAFSTKEVVAITGMTKDALRYYEQQRLIGPVPRNHNNYRQYSRQNLERLQFVATFRQLGLDLKLLSGDGH
IPNRAQRIQELSSYRATVKKQIAQLQATDQFLAHKIAYFEASPNH

Specific function: Copper responsive transcription regulator [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14478; Mature: 14478

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFTIPAEQTAFSTKEVVAITGMTKDALRYYEQQRLIGPVPRNHNNYRQYSRQNLERLQ
CEEEECCCHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
FVATFRQLGLDLKLLSGDGHIPNRAQRIQELSSYRATVKKQIAQLQATDQFLAHKIAYFE
HHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ASPNH
CCCCC
>Mature Secondary Structure
MRLFTIPAEQTAFSTKEVVAITGMTKDALRYYEQQRLIGPVPRNHNNYRQYSRQNLERLQ
CEEEECCCHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
FVATFRQLGLDLKLLSGDGHIPNRAQRIQELSSYRATVKKQIAQLQATDQFLAHKIAYFE
HHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ASPNH
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA