Click here to switch to the map view.

The map label for this gene is 28379098

Identifier: 28379098

GI number: 28379098

Start: 2283905

End: 2285068

Strand: Direct

Name: 28379098

Synonym: lp_2564

Alternate gene names: NA

Gene position: 2283905-2285068 (Clockwise)

Preceding gene: 28379083

Following gene: 28379099

Centisome position: 69.04

GC content: 46.91

Gene sequence:

>1164_bases
ATGCACGAACTCATTACAAAACTTTATCAACTCGCACTTTCCAGTCACATTGTCAGTACGTTGCTGGAACCCGTGCACAT
CGTTATCTTAGCTTTACCCATCATGACCTTACTACTCGCCATGATTATCCTGACTATCCAGCTCCGAACACGTCAAACAC
TGAGTGAGCGTAACTTGATCAGTACCTATTCGTTTATTTGGTACTTGGCAGCAGCCTACTTACTAATTATTCTGCCACTC
CCGACTCGCTCATCCGTGGCTAGCCTAACAACTGCTGAGTATAATTTACAACCCTTCTACTTTCTCACCCAGTTGAAGGC
ACTCACGCCGTTTGAACTCGGGGACCCCAGTACTTGGTTAGCCGCCTTCAAATCTGACACGTTCTTCCAGCCGTTCTTCA
ATATTCTATTATTTATGCCGATCGGTGCCTACTTAAAGTGGCGGCACCGCTGGCCGCTCTGGTTGATCACCCTGACGAGC
TTCTCGATTTCATTGTTCTTCGAAACCACGCAGTTAACCGGATTATACGGCTACTACTCACGAGCCTACCGGATGTTCGA
TGTCGACGATTTAATGATGAACACACTTGGTGGGATTGTCGGTGCTGGGTGTCTACATCTGATTCCTAATCAGTGGCGCA
ATCGCGACCACAGTACCCGGTTGAATTGGCAGGAACACCCCATCAATTGGCGCCGCATTGGGGCGTTGGTCATCGATTGG
CTCGCAATTGCCGCCTTTGACACCGTCTACTTCGTCTTAGTCAAACATTTTAATTGGCCATTACCACATGATTTTCGCTG
GCTATACCTGGCCGATATCATCCTCTTCTTCATTGGGCCCGCCTGGTGTTGGCATGGTAAAACCATTGGTGGTCGCCTGC
TCAATAGTCAGATCGTAACCATCAGTGGTCACCAGGCCAATCTCTGGCAACTGCTTATCCATTACATTGGGCTCTACCTA
ATCGGCCTGCCACTTTTATTCTTGGATTTATGGTTATTCAATCGTCTAGGCAACGTTCCTAGTGCCACCCTTAACCGCCT
GGATGTCTACCTCGTCGTCGTTTCAGTCATTTTACTGATTATCAGTTATGATTTATTGTTAGCACTTTTCAGTCGCAGTC
ACCAGTTATGGTGTGAAAAGTTAAGTAGAACAACTGTTAAATAA

Upstream 100 bases:

>100_bases
ACTTATTTATTTATATTAATTGTCACAATTTCTTTATACCATGATATAGTCAACATTAGTTAAAGAACAGCGCTATTCCC
AAAAAAGGGGGGGACCAGCC

Downstream 100 bases:

>100_bases
TTAGGTGGCCTTAAAACTTCCTTTGCGTTGTCTCGCAACTCATGTTAAATTGAAGATATCTCAAAACGCTGGAAGTAAAA
ACAATGATAAAAGTCCATGA

Product: integral membrane protein

Products: NA

Alternate protein names: VanZ Family Protein; Permease; Integral Membrane Protein; Vanz Family Protein; Carbohydrate Kinase YjeF Related Protein; VanZ-Like Protein; VanZ/RDD Family Protein

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MHELITKLYQLALSSHIVSTLLEPVHIVILALPIMTLLLAMIILTIQLRTRQTLSERNLISTYSFIWYLAAAYLLIILPL
PTRSSVASLTTAEYNLQPFYFLTQLKALTPFELGDPSTWLAAFKSDTFFQPFFNILLFMPIGAYLKWRHRWPLWLITLTS
FSISLFFETTQLTGLYGYYSRAYRMFDVDDLMMNTLGGIVGAGCLHLIPNQWRNRDHSTRLNWQEHPINWRRIGALVIDW
LAIAAFDTVYFVLVKHFNWPLPHDFRWLYLADIILFFIGPAWCWHGKTIGGRLLNSQIVTISGHQANLWQLLIHYIGLYL
IGLPLLFLDLWLFNRLGNVPSATLNRLDVYLVVVSVILLIISYDLLLALFSRSHQLWCEKLSRTTVK

Sequences:

>Translated_387_residues
MHELITKLYQLALSSHIVSTLLEPVHIVILALPIMTLLLAMIILTIQLRTRQTLSERNLISTYSFIWYLAAAYLLIILPL
PTRSSVASLTTAEYNLQPFYFLTQLKALTPFELGDPSTWLAAFKSDTFFQPFFNILLFMPIGAYLKWRHRWPLWLITLTS
FSISLFFETTQLTGLYGYYSRAYRMFDVDDLMMNTLGGIVGAGCLHLIPNQWRNRDHSTRLNWQEHPINWRRIGALVIDW
LAIAAFDTVYFVLVKHFNWPLPHDFRWLYLADIILFFIGPAWCWHGKTIGGRLLNSQIVTISGHQANLWQLLIHYIGLYL
IGLPLLFLDLWLFNRLGNVPSATLNRLDVYLVVVSVILLIISYDLLLALFSRSHQLWCEKLSRTTVK
>Mature_387_residues
MHELITKLYQLALSSHIVSTLLEPVHIVILALPIMTLLLAMIILTIQLRTRQTLSERNLISTYSFIWYLAAAYLLIILPL
PTRSSVASLTTAEYNLQPFYFLTQLKALTPFELGDPSTWLAAFKSDTFFQPFFNILLFMPIGAYLKWRHRWPLWLITLTS
FSISLFFETTQLTGLYGYYSRAYRMFDVDDLMMNTLGGIVGAGCLHLIPNQWRNRDHSTRLNWQEHPINWRRIGALVIDW
LAIAAFDTVYFVLVKHFNWPLPHDFRWLYLADIILFFIGPAWCWHGKTIGGRLLNSQIVTISGHQANLWQLLIHYIGLYL
IGLPLLFLDLWLFNRLGNVPSATLNRLDVYLVVVSVILLIISYDLLLALFSRSHQLWCEKLSRTTVK

Specific function: Unknown

COG id: COG4767

COG function: function code V; Glycopeptide antibiotics resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44921; Mature: 44921

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHELITKLYQLALSSHIVSTLLEPVHIVILALPIMTLLLAMIILTIQLRTRQTLSERNLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STYSFIWYLAAAYLLIILPLPTRSSVASLTTAEYNLQPFYFLTQLKALTPFELGDPSTWL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHH
AAFKSDTFFQPFFNILLFMPIGAYLKWRHRWPLWLITLTSFSISLFFETTQLTGLYGYYS
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHEEEEEEEHHHHHHHHHHHH
RAYRMFDVDDLMMNTLGGIVGAGCLHLIPNQWRNRDHSTRLNWQEHPINWRRIGALVIDW
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LAIAAFDTVYFVLVKHFNWPLPHDFRWLYLADIILFFIGPAWCWHGKTIGGRLLNSQIVT
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEE
ISGHQANLWQLLIHYIGLYLIGLPLLFLDLWLFNRLGNVPSATLNRLDVYLVVVSVILLI
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
ISYDLLLALFSRSHQLWCEKLSRTTVK
HHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHELITKLYQLALSSHIVSTLLEPVHIVILALPIMTLLLAMIILTIQLRTRQTLSERNLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STYSFIWYLAAAYLLIILPLPTRSSVASLTTAEYNLQPFYFLTQLKALTPFELGDPSTWL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHH
AAFKSDTFFQPFFNILLFMPIGAYLKWRHRWPLWLITLTSFSISLFFETTQLTGLYGYYS
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHEEEEEEEHHHHHHHHHHHH
RAYRMFDVDDLMMNTLGGIVGAGCLHLIPNQWRNRDHSTRLNWQEHPINWRRIGALVIDW
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LAIAAFDTVYFVLVKHFNWPLPHDFRWLYLADIILFFIGPAWCWHGKTIGGRLLNSQIVT
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEE
ISGHQANLWQLLIHYIGLYLIGLPLLFLDLWLFNRLGNVPSATLNRLDVYLVVVSVILLI
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
ISYDLLLALFSRSHQLWCEKLSRTTVK
HHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA