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The map label for this gene is 28379012

Identifier: 28379012

GI number: 28379012

Start: 2197016

End: 2197399

Strand: Direct

Name: 28379012

Synonym: lp_2449

Alternate gene names: NA

Gene position: 2197016-2197399 (Clockwise)

Preceding gene: 28379011

Following gene: 28379013

Centisome position: 66.41

GC content: 41.93

Gene sequence:

>384_bases
ATTGTCAATCGTTATCACACAGCGGACCCGTTTGTAATTGCGGAAAAGCTTAACATACAAGTGGAATGGTGTGATTTTGG
GGCAATGCCCCTGGGAAAAAATGCTTATGACAACCAAGAGCCTATCATACTACTCAACGATTCCATTAAACACACGCCTA
CACAGTATTTCATACTCGGTCATGAGCTGGGACACGTTATATTCCATGAGGGGCTGATTGGGTACTACACTTCCGTTAAA
CATGGACATTCTAAGTTTGAACGTGAAGCTGATGAATTTTCAGTTGGATTGATGGGAATGTTGTTTATTGAGGAGAATGG
CCATATTCCCTATTCATACAGAGAACTGTCCTATCAATACGGGGTACCATTCGACGGAGATTAA

Upstream 100 bases:

>100_bases
AACAACAAGTGCGTGTGGCCATGGCAACAATATTCTGGAAACGCCACAAGCATGATTAGGAGTTGTACTTATGGATAGAG
TAAAAGATATCGTTAAAACT

Downstream 100 bases:

>100_bases
TATCAATTAATTTGGAGGAATTATAAATGAAAAAGATGAGTATTGGTTTCATAGCCGTTATAGCTATAATTTTTACACTG
ACCGGTTGTGGAAACAAAAA

Product: prophage Lp2 protein 8

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MVNRYHTADPFVIAEKLNIQVEWCDFGAMPLGKNAYDNQEPIILLNDSIKHTPTQYFILGHELGHVIFHEGLIGYYTSVK
HGHSKFEREADEFSVGLMGMLFIEENGHIPYSYRELSYQYGVPFDGD

Sequences:

>Translated_127_residues
MVNRYHTADPFVIAEKLNIQVEWCDFGAMPLGKNAYDNQEPIILLNDSIKHTPTQYFILGHELGHVIFHEGLIGYYTSVK
HGHSKFEREADEFSVGLMGMLFIEENGHIPYSYRELSYQYGVPFDGD
>Mature_127_residues
MVNRYHTADPFVIAEKLNIQVEWCDFGAMPLGKNAYDNQEPIILLNDSIKHTPTQYFILGHELGHVIFHEGLIGYYTSVK
HGHSKFEREADEFSVGLMGMLFIEENGHIPYSYRELSYQYGVPFDGD

Specific function: Unknown

COG id: COG2856

COG function: function code E; Predicted Zn peptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14615; Mature: 14615

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNRYHTADPFVIAEKLNIQVEWCDFGAMPLGKNAYDNQEPIILLNDSIKHTPTQYFILG
CCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEE
HELGHVIFHEGLIGYYTSVKHGHSKFEREADEFSVGLMGMLFIEENGHIPYSYRELSYQY
CHHCCEEHHCCHHHHHHHCCCCHHHHHHCHHHHCEEEEEEEEEECCCCCCEEHHEEEEEE
GVPFDGD
CCCCCCC
>Mature Secondary Structure
MVNRYHTADPFVIAEKLNIQVEWCDFGAMPLGKNAYDNQEPIILLNDSIKHTPTQYFILG
CCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEE
HELGHVIFHEGLIGYYTSVKHGHSKFEREADEFSVGLMGMLFIEENGHIPYSYRELSYQY
CHHCCEEHHCCHHHHHHHCCCCHHHHHHCHHHHCEEEEEEEEEECCCCCCEEHHEEEEEE
GVPFDGD
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA