| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is galM2 [H]
Identifier: 28378412
GI number: 28378412
Start: 1568652
End: 1569665
Strand: Direct
Name: galM2 [H]
Synonym: lp_1731
Alternate gene names: 28378412
Gene position: 1568652-1569665 (Clockwise)
Preceding gene: 28378411
Following gene: 28378417
Centisome position: 47.42
GC content: 49.11
Gene sequence:
>1014_bases ATGAGGCGTACGATTTCTGCAGTACCATTTGGTGTGTATCAAGGCGAGTCAGTCTATTTATACACGATTGAAAATATCCA TCATAGCAAACTAAAAGTGTTGAGTTATGCGGCAACGTGGTATGACTTCGAAGTGCAGGTCGACCGCCAGCCACAATCAT TAGTGCTTCACTTTGATAACTTGGCGGATTATATCGAGACGCCTTATCAAGTCGGCAAAACAGTGGGTCGAGTTGCTGGC CGAATCGGTAACGCGACGTTTTCCTTGAATGGGCAGACATACCACTTACCGCCAAATAACGGCCGGCATTTGCTACACGG TGGCGGTCATGGCTTACAAACGCATAATTTTCGAGCCCGTTTTGATCCTGATGGCGACACTGTCATATTGACGACAACGC TAGCGAGCGCTGACGATGGGTTTCCAGGCGACTTGACAGTAACTATAAGCTATACGTTAACGGCCGATGATGAGGTTCAA ATCAGCTATCACGGGGTGACCACTGCTGATACGTTATTCAATCCGACCTGTCACGTTTACTTTAATCTTGATGGTCAGGC CGCACTGATTAATCCCCAGCAATTACGTATCAACTCGACCAAGCTAGTTCATACGAATCACGAGAAGGTTCCGACCGGCG TCTTCTACGTCCCGTCACCAGCGTATGACTTTCGTGAGCAGCCAACGATTCAATCGCAGCTCGATCGATTGATCCAAGAA ACTGGCAGGACGGAATACGATGATTGCTATGTGCTTGACCACCAGGATGAACCCGCTGGCGTGTTGGCAACGACTCACGG GCGACTGCTCATCAACACGGATCGCAATGGTTTAGTTATCTTTACCGCTAATCCCGAACGAACGCAGCCGTATCGTTTAG GGGACTACCATGCGCTGGCCGTAGAATTGCAAACCTTGCCGGATGCTATTAATCATCATGGCTTTGGCGATGTTGTTCTA CGGGCTGGTCAGCCACGGACGTACGTGAACCGCTACCAATACGTGTCAAAATAG
Upstream 100 bases:
>100_bases GACTTTGAAGTTGATTGCCGGGGAACCGATTGATGTTCAAGTGGATGGTACCACGCAAACATTGACACAGAACTAGTTCA ATCCGCACTGATCGAAGGGA
Downstream 100 bases:
>100_bases CAATCAATAGATGATGGAAATTATTTTCTTTACCACGATCAAAAAGCAGTGCTTGCCATAGGGGCACACTGCTTTTTTGG TGTACTTGGTTATAACAAAA
Product: aldose 1-epimerase
Products: NA
Alternate protein names: Galactose mutarotase; Type-1 mutarotase [H]
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MRRTISAVPFGVYQGESVYLYTIENIHHSKLKVLSYAATWYDFEVQVDRQPQSLVLHFDNLADYIETPYQVGKTVGRVAG RIGNATFSLNGQTYHLPPNNGRHLLHGGGHGLQTHNFRARFDPDGDTVILTTTLASADDGFPGDLTVTISYTLTADDEVQ ISYHGVTTADTLFNPTCHVYFNLDGQAALINPQQLRINSTKLVHTNHEKVPTGVFYVPSPAYDFREQPTIQSQLDRLIQE TGRTEYDDCYVLDHQDEPAGVLATTHGRLLINTDRNGLVIFTANPERTQPYRLGDYHALAVELQTLPDAINHHGFGDVVL RAGQPRTYVNRYQYVSK
Sequences:
>Translated_337_residues MRRTISAVPFGVYQGESVYLYTIENIHHSKLKVLSYAATWYDFEVQVDRQPQSLVLHFDNLADYIETPYQVGKTVGRVAG RIGNATFSLNGQTYHLPPNNGRHLLHGGGHGLQTHNFRARFDPDGDTVILTTTLASADDGFPGDLTVTISYTLTADDEVQ ISYHGVTTADTLFNPTCHVYFNLDGQAALINPQQLRINSTKLVHTNHEKVPTGVFYVPSPAYDFREQPTIQSQLDRLIQE TGRTEYDDCYVLDHQDEPAGVLATTHGRLLINTDRNGLVIFTANPERTQPYRLGDYHALAVELQTLPDAINHHGFGDVVL RAGQPRTYVNRYQYVSK >Mature_337_residues MRRTISAVPFGVYQGESVYLYTIENIHHSKLKVLSYAATWYDFEVQVDRQPQSLVLHFDNLADYIETPYQVGKTVGRVAG RIGNATFSLNGQTYHLPPNNGRHLLHGGGHGLQTHNFRARFDPDGDTVILTTTLASADDGFPGDLTVTISYTLTADDEVQ ISYHGVTTADTLFNPTCHVYFNLDGQAALINPQQLRINSTKLVHTNHEKVPTGVFYVPSPAYDFREQPTIQSQLDRLIQE TGRTEYDDCYVLDHQDEPAGVLATTHGRLLINTDRNGLVIFTANPERTQPYRLGDYHALAVELQTLPDAINHHGFGDVVL RAGQPRTYVNRYQYVSK
Specific function: Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose [H]
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldose epimerase family [H]
Homologues:
Organism=Homo sapiens, GI20270355, Length=318, Percent_Identity=29.2452830188679, Blast_Score=110, Evalue=3e-24, Organism=Escherichia coli, GI1786971, Length=338, Percent_Identity=26.3313609467456, Blast_Score=120, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17557428, Length=293, Percent_Identity=29.3515358361775, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI115533334, Length=293, Percent_Identity=29.3515358361775, Blast_Score=107, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6319493, Length=306, Percent_Identity=28.4313725490196, Blast_Score=83, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6322004, Length=337, Percent_Identity=26.4094955489614, Blast_Score=73, Evalue=5e-14, Organism=Drosophila melanogaster, GI24583720, Length=326, Percent_Identity=28.8343558282209, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24659048, Length=334, Percent_Identity=27.8443113772455, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI24668278, Length=329, Percent_Identity=27.0516717325228, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI24641876, Length=347, Percent_Identity=25.6484149855908, Blast_Score=85, Evalue=8e-17, Organism=Drosophila melanogaster, GI24668282, Length=335, Percent_Identity=26.5671641791045, Blast_Score=83, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018052 - InterPro: IPR013458 - InterPro: IPR008183 - InterPro: IPR015443 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.3 [H]
Molecular weight: Translated: 37789; Mature: 37789
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTISAVPFGVYQGESVYLYTIENIHHSKLKVLSYAATWYDFEVQVDRQPQSLVLHFDN CCCEECCCEEEEECCCEEEEEEECCCCCCCEEEEEEEEEEEEEEEEECCCCCEEEEEEHH LADYIETPYQVGKTVGRVAGRIGNATFSLNGQTYHLPPNNGRHLLHGGGHGLQTHNFRAR HHHHHHCHHHHHHHHHHHHHHCCCEEEEECCEEEECCCCCCCEEEECCCCCCCCCCEEEE FDPDGDTVILTTTLASADDGFPGDLTVTISYTLTADDEVQISYHGVTTADTLFNPTCHVY ECCCCCEEEEEEEEECCCCCCCCCEEEEEEEEEECCCEEEEEECCCEEHHHHCCCEEEEE FNLDGQAALINPQQLRINSTKLVHTNHEKVPTGVFYVPSPAYDFREQPTIQSQLDRLIQE EEECCCEEEECCHHEEECCEEEEECCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH TGRTEYDDCYVLDHQDEPAGVLATTHGRLLINTDRNGLVIFTANPERTQPYRLGDYHALA HCCCCCCCEEEEECCCCCCCEEEEECCEEEEEECCCCEEEEECCCCCCCCEECCCEEEEE VELQTLPDAINHHGFGDVVLRAGQPRTYVNRYQYVSK EEEEHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCC >Mature Secondary Structure MRRTISAVPFGVYQGESVYLYTIENIHHSKLKVLSYAATWYDFEVQVDRQPQSLVLHFDN CCCEECCCEEEEECCCEEEEEEECCCCCCCEEEEEEEEEEEEEEEEECCCCCEEEEEEHH LADYIETPYQVGKTVGRVAGRIGNATFSLNGQTYHLPPNNGRHLLHGGGHGLQTHNFRAR HHHHHHCHHHHHHHHHHHHHHCCCEEEEECCEEEECCCCCCCEEEECCCCCCCCCCEEEE FDPDGDTVILTTTLASADDGFPGDLTVTISYTLTADDEVQISYHGVTTADTLFNPTCHVY ECCCCCEEEEEEEEECCCCCCCCCEEEEEEEEEECCCEEEEEECCCEEHHHHCCCEEEEE FNLDGQAALINPQQLRINSTKLVHTNHEKVPTGVFYVPSPAYDFREQPTIQSQLDRLIQE EEECCCEEEECCHHEEECCEEEEECCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH TGRTEYDDCYVLDHQDEPAGVLATTHGRLLINTDRNGLVIFTANPERTQPYRLGDYHALA HCCCCCCCEEEEECCCCCCCEEEEECCEEEEEECCCCEEEEECCCCCCCCEECCCEEEEE VELQTLPDAINHHGFGDVVLRAGQPRTYVNRYQYVSK EEEEHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1694527 [H]