Click here to switch to the map view.

The map label for this gene is 28378395

Identifier: 28378395

GI number: 28378395

Start: 1550149

End: 1550415

Strand: Direct

Name: 28378395

Synonym: lp_1706

Alternate gene names: NA

Gene position: 1550149-1550415 (Clockwise)

Preceding gene: 28378394

Following gene: 28378399

Centisome position: 46.86

GC content: 53.56

Gene sequence:

>267_bases
ATGCATTGGTTATGGGTAATGATTGTTGGCGCGGCGGTTGGTGCTTTTGCAGGTGCTATCATGAGCCCCAGTCAATCGCG
GGGTTGGATCGGTCACATTATTGCTGGCGTTCTTGGGGCACTCATTGGTGAAGGTGTGCTGGGGCCGATGGGGCCTGAGT
TAGCCGGAATGACTGTGATACCAGCCGCAATCGGTGCAATTGCCGTCGTTCTGATAATGATGTTCGTGGTTCAGTGGGCA
CGGGTTCGACGGTCAAAACACAATTGA

Upstream 100 bases:

>100_bases
GGGTAAATTGTCACTATTGATTGCAATTGGGCAATTAGGATTGACTGTGTTTCGAGAAGTGCGGCAGTTCAAACACCGCC
GCTAAAAAGGGGATGACAGC

Downstream 100 bases:

>100_bases
ACAGTGCCAATTGACAGCCTGGCTGTACGCTCGGCATCAAAAAATGTTAAACATCACCCTAAACAGCCCCACAGGTGACT
TCGAGGTACTAGCTTACTCG

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MHWLWVMIVGAAVGAFAGAIMSPSQSRGWIGHIIAGVLGALIGEGVLGPMGPELAGMTVIPAAIGAIAVVLIMMFVVQWA
RVRRSKHN

Sequences:

>Translated_88_residues
MHWLWVMIVGAAVGAFAGAIMSPSQSRGWIGHIIAGVLGALIGEGVLGPMGPELAGMTVIPAAIGAIAVVLIMMFVVQWA
RVRRSKHN
>Mature_88_residues
MHWLWVMIVGAAVGAFAGAIMSPSQSRGWIGHIIAGVLGALIGEGVLGPMGPELAGMTVIPAAIGAIAVVLIMMFVVQWA
RVRRSKHN

Specific function: Unknown

COG id: COG2261

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9173; Mature: 9173

Theoretical pI: Translated: 12.06; Mature: 12.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.0 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHWLWVMIVGAAVGAFAGAIMSPSQSRGWIGHIIAGVLGALIGEGVLGPMGPELAGMTVI
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
PAAIGAIAVVLIMMFVVQWARVRRSKHN
HHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHWLWVMIVGAAVGAFAGAIMSPSQSRGWIGHIIAGVLGALIGEGVLGPMGPELAGMTVI
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
PAAIGAIAVVLIMMFVVQWARVRRSKHN
HHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA