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The map label for this gene is gbpA [H]

Identifier: 28378386

GI number: 28378386

Start: 1544901

End: 1545506

Strand: Direct

Name: gbpA [H]

Synonym: lp_1697

Alternate gene names: 28378386

Gene position: 1544901-1545506 (Clockwise)

Preceding gene: 28378385

Following gene: 28378388

Centisome position: 46.7

GC content: 41.25

Gene sequence:

>606_bases
ATGTTGAGCACCAAGAAGAATCATGTATTACGGTACTTATTTATTATAGTTGGTATGATGATCGCGTTTTTAGGTTGTGG
CGTGATTCAAGTTTCAGCACATGGCTTTGTGACGAACCCGGGTGGCAGAGCTTATCTGGGGAGTACTTGGTATCCAGGTG
GGCCTTTGAATACCAATATTGGTTCGGTTATGTATGAACCACAGAGTATTGAAGCGCCCCAAAATACATTTATTGATGGC
AAAATTGCCAGTGCCGGTATTGCTAACTTTGCACCACTGGACGAGCAAAATGCCAAACGGTGGTATAAGACACCTGTGAA
GGCCGGCAATCTTAGTGTGACTTGGCAGTTAACTGCTCGTCATAAAACTAGTACTTGGGATTACTATATTACCAAGCCTA
GCTGGAATCCAAACGCACCACTTAAGTTTAGTGATTTCAAGAAGATAGCTAGTTATAATGACAATGGTGCCATCCCTAGT
GAATTTGTAACCCATCAAGTCAATATTTCTGCTAATGAAAAAGGCTATCAAGTGTTACTCAGTGTTTGGAATATAGCGGA
TACTGGTAATGCGTTCTATCAAGTCTCAGATATTGACGTACAGTAA

Upstream 100 bases:

>100_bases
GGCTGGAATCGATAGGCATAGAAAAGATTTCGGGCCTCTGTGCATCTTGGTGGCTATCATGTTGTCAGGGCGTTATAGTG
ACAATTGAGGAGGGGATCTT

Downstream 100 bases:

>100_bases
TTAGATGAGGCCTAAATTTACTTTGAGGTGATTTTAGACTATAAAAGTTGTCTTTGAGATATCGTAAAGGTCTTACTGGC
GTTTATTGGCTAGTAAGACC

Product: extracellular protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MLSTKKNHVLRYLFIIVGMMIAFLGCGVIQVSAHGFVTNPGGRAYLGSTWYPGGPLNTNIGSVMYEPQSIEAPQNTFIDG
KIASAGIANFAPLDEQNAKRWYKTPVKAGNLSVTWQLTARHKTSTWDYYITKPSWNPNAPLKFSDFKKIASYNDNGAIPS
EFVTHQVNISANEKGYQVLLSVWNIADTGNAFYQVSDIDVQ

Sequences:

>Translated_201_residues
MLSTKKNHVLRYLFIIVGMMIAFLGCGVIQVSAHGFVTNPGGRAYLGSTWYPGGPLNTNIGSVMYEPQSIEAPQNTFIDG
KIASAGIANFAPLDEQNAKRWYKTPVKAGNLSVTWQLTARHKTSTWDYYITKPSWNPNAPLKFSDFKKIASYNDNGAIPS
EFVTHQVNISANEKGYQVLLSVWNIADTGNAFYQVSDIDVQ
>Mature_201_residues
MLSTKKNHVLRYLFIIVGMMIAFLGCGVIQVSAHGFVTNPGGRAYLGSTWYPGGPLNTNIGSVMYEPQSIEAPQNTFIDG
KIASAGIANFAPLDEQNAKRWYKTPVKAGNLSVTWQLTARHKTSTWDYYITKPSWNPNAPLKFSDFKKIASYNDNGAIPS
EFVTHQVNISANEKGYQVLLSVWNIADTGNAFYQVSDIDVQ

Specific function: Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin [H]

COG id: COG3397

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chitin-binding type-4 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004302
- InterPro:   IPR020879
- InterPro:   IPR014756 [H]

Pfam domain/function: PF03067 Chitin_bind_3 [H]

EC number: NA

Molecular weight: Translated: 22229; Mature: 22229

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSTKKNHVLRYLFIIVGMMIAFLGCGVIQVSAHGFVTNPGGRAYLGSTWYPGGPLNTNI
CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCEEECCCCCCCCCCCCCC
GSVMYEPQSIEAPQNTFIDGKIASAGIANFAPLDEQNAKRWYKTPVKAGNLSVTWQLTAR
CCEEECCCCCCCCCCCEECCEECCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEEC
HKTSTWDYYITKPSWNPNAPLKFSDFKKIASYNDNGAIPSEFVTHQVNISANEKGYQVLL
CCCCCCEEEEECCCCCCCCCEEHHHHHHHHCCCCCCCCCHHHEEEEEEECCCCCHHEEEE
SVWNIADTGNAFYQVSDIDVQ
EHHCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MLSTKKNHVLRYLFIIVGMMIAFLGCGVIQVSAHGFVTNPGGRAYLGSTWYPGGPLNTNI
CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCEEECCCCCCCCCCCCCC
GSVMYEPQSIEAPQNTFIDGKIASAGIANFAPLDEQNAKRWYKTPVKAGNLSVTWQLTAR
CCEEECCCCCCCCCCCEECCEECCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEEC
HKTSTWDYYITKPSWNPNAPLKFSDFKKIASYNDNGAIPSEFVTHQVNISANEKGYQVLL
CCCCCCEEEEECCCCCCCCCEEHHHHHHHHCCCCCCCCCHHHEEEEEEECCCCCHHEEEE
SVWNIADTGNAFYQVSDIDVQ
EHHCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA