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The map label for this gene is ysxB [H]

Identifier: 28378294

GI number: 28378294

Start: 1450985

End: 1451320

Strand: Direct

Name: ysxB [H]

Synonym: lp_1593

Alternate gene names: 28378294

Gene position: 1450985-1451320 (Clockwise)

Preceding gene: 28378293

Following gene: 28378295

Centisome position: 43.86

GC content: 43.75

Gene sequence:

>336_bases
ATGATTCAGGCAACCATTTCTCGTAATGCGACCGGTCAAGTGACCGCTTTTAAGTTGACGGGACATGCTGATTCAGGTGC
TTATGGACAAGACATCGTTTGTGCAGCGGTTTCGGTGTTAGCAATTAGTACAATCAATGGGATTGAACAAGTTGCCCGCT
TGCAACCCGTAGTACAAAGTGATGAAACCAATGGTGGGCTATTAATTGCAGATTTCACTAAGCTGGACTTGGCGAACACA
CAATTACAAACCTTACTTGAAAGTTTCACACTTGGTTTGAACGATGTGGCCACGAATTACGGAGATTACATCCGAGTTCG
TGAACAAACACGATAA

Upstream 100 bases:

>100_bases
GGCCAAGAAGGGCCAACATACTAAGAAGGGTCATCGCCAACCATACACTAAGGTAACGATCGACACAATTAATGCATAAT
TAAGAAAGTAGGCATTCTTT

Downstream 100 bases:

>100_bases
CCACATTCGGAGGTGGACTTTACTATGTTAATGAACTTGCAATTCTTCTCTCACCATAAAGGTGGCGGTTCAACTGCCAA
CGGTCGGGATTCAGCTGGTC

Product: ribosomal protein (putative)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MIQATISRNATGQVTAFKLTGHADSGAYGQDIVCAAVSVLAISTINGIEQVARLQPVVQSDETNGGLLIADFTKLDLANT
QLQTLLESFTLGLNDVATNYGDYIRVREQTR

Sequences:

>Translated_111_residues
MIQATISRNATGQVTAFKLTGHADSGAYGQDIVCAAVSVLAISTINGIEQVARLQPVVQSDETNGGLLIADFTKLDLANT
QLQTLLESFTLGLNDVATNYGDYIRVREQTR
>Mature_111_residues
MIQATISRNATGQVTAFKLTGHADSGAYGQDIVCAAVSVLAISTINGIEQVARLQPVVQSDETNGGLLIADFTKLDLANT
QLQTLLESFTLGLNDVATNYGDYIRVREQTR

Specific function: Unknown

COG id: COG2868

COG function: function code J; Predicted ribosomal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.genitalium MG233 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007422 [H]

Pfam domain/function: PF04327 DUF464 [H]

EC number: NA

Molecular weight: Translated: 11873; Mature: 11873

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQATISRNATGQVTAFKLTGHADSGAYGQDIVCAAVSVLAISTINGIEQVARLQPVVQS
CEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DETNGGLLIADFTKLDLANTQLQTLLESFTLGLNDVATNYGDYIRVREQTR
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCEEEEECCCC
>Mature Secondary Structure
MIQATISRNATGQVTAFKLTGHADSGAYGQDIVCAAVSVLAISTINGIEQVARLQPVVQS
CEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DETNGGLLIADFTKLDLANTQLQTLLESFTLGLNDVATNYGDYIRVREQTR
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1942049; 9384377; 3918016 [H]