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The map label for this gene is dnaB [H]

Identifier: 28378226

GI number: 28378226

Start: 1383167

End: 1384567

Strand: Direct

Name: dnaB [H]

Synonym: lp_1512

Alternate gene names: 28378226

Gene position: 1383167-1384567 (Clockwise)

Preceding gene: 28378225

Following gene: 28378227

Centisome position: 41.81

GC content: 48.18

Gene sequence:

>1401_bases
ATGCCAAATGATGAACCCTTAACACCCAAAACTGGGTTAGTGGTCCCGCAAGCACCAGCGCTCAGTGCGGCGCAACAAGC
TGTATTGGCGGAATTATACTTGCCACTGATGGGGCCATTGGCATATAGCTTGTACGCGGCGTTACGTAGCTTACAGAGTA
GCGAGAATGAGCTGAGCAATCGACGCAGTCACGCGGAACTGCTTGGCATCCTAAATGTGGACTTGCCGACGGTGTTAGCG
GCTCGGCGTAAACTTGAAGCAACTGGCTTGTTGCGCAGCTATTATCAACAAGATGAATTGGGTGCCATGTATATTTATCA
ATTACAAGCACCATTACTGGCGTTACAATTCTTTGCGGATGATCTATTGAGTGTCCTATTGTTAGATACGGTCGGTGAGT
TACGTTATCAACAACTTGCTGGCGATTTTGCAGCACAGCCGATTGACTTGACGGCTGCCAAAGACGTGACGGCAAATATC
TTAGATGTGTTTCACGTTGATAGTCAAAAAGTTACGACGCCACCTCTTTCAGTGCAAAAGGTGCGCGCCCAATTGGCGGC
CAATGAACCGGCCGAGGATCACTCGCCCGTGCTCAGTGACGATGACTTTGACTGGCAACTGTTGGGGCAAATTTTAAAGC
AGAACTATGTTGATCTCAAACAGGTTGCGAGTTCACGGCAACTGATCATTACGGAAAGTCGGGTCTACGGCATCAGTGAG
ATTGAGATGGCTAAGTTAATCAGTGAAGTGGCTAGTTTAACAACGGGTCAGTTTGATGAAAATCAATTGAAATTATTGAT
TGCGCGGCGCTATGAACGGCCCGCAGTTTCGAGTCAGCAGGTCGCTACGGAAGCAACGGTTGCAACGACGACCAAGGATA
ACAAGGCTTCAGCACAGCTCTCAACGGCTGAGCAGCAACTCGTGACGTATGCTAAGCAGACAGCGCCGTATGACTTTTTA
TCAGCTTTGAAGCAGGAGAAACATGGTTTTGTGACAAGCGGTGAGAACCGGCTAGTTCATGATTTAATTGGTCGGGGGGT
ATTACCCAATGCCGTCATCAACATGGTGATCTACTACTTATTGCAAAATCGGGAGTTAGCTGCCCTTAATCGTAATTTGC
TAGAAACAGTCGCCAATGATTGGCAACAACACGGCATTACGACGCCGGAAGCGGCTTTGATGTATTTGAAGCAACGTAAA
CAGCCGAGATCAACACCAACACGGCGCAAGAACAATCGACCGACGCGTAAGGAGATTATGCCAAAGTGGGCCCAACAACA
GCAACAGACTGAGAGTGGTAAGCAACCAGCTCAGACCGGTAAACAAATTACTGCTGCCCAACGCAAACAGCTTGCTGATC
GACTAGCAAAGCTTGAGACAAATTCGGAAAAGGAGGACTAA

Upstream 100 bases:

>100_bases
TATGATGGAGCGTGATAAGGTCAAACTGGCAAAACCGTCAGCGAAGACGACCCACGCACCTAAACGAAAAAAAGATTAGT
GAAAAAGAATGGTGAACAAC

Downstream 100 bases:

>100_bases
AACATGGAGAATATCTCAGAAACACTCCGGACGTTAATGAATCGGAAAAACTTGAATCATCGGTATGAGGCGTTAATGAC
AGCTGTGTACCAAGATCCAG

Product: replication initiation and membrane attachment protein DnaB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MPNDEPLTPKTGLVVPQAPALSAAQQAVLAELYLPLMGPLAYSLYAALRSLQSSENELSNRRSHAELLGILNVDLPTVLA
ARRKLEATGLLRSYYQQDELGAMYIYQLQAPLLALQFFADDLLSVLLLDTVGELRYQQLAGDFAAQPIDLTAAKDVTANI
LDVFHVDSQKVTTPPLSVQKVRAQLAANEPAEDHSPVLSDDDFDWQLLGQILKQNYVDLKQVASSRQLIITESRVYGISE
IEMAKLISEVASLTTGQFDENQLKLLIARRYERPAVSSQQVATEATVATTTKDNKASAQLSTAEQQLVTYAKQTAPYDFL
SALKQEKHGFVTSGENRLVHDLIGRGVLPNAVINMVIYYLLQNRELAALNRNLLETVANDWQQHGITTPEAALMYLKQRK
QPRSTPTRRKNNRPTRKEIMPKWAQQQQQTESGKQPAQTGKQITAAQRKQLADRLAKLETNSEKED

Sequences:

>Translated_466_residues
MPNDEPLTPKTGLVVPQAPALSAAQQAVLAELYLPLMGPLAYSLYAALRSLQSSENELSNRRSHAELLGILNVDLPTVLA
ARRKLEATGLLRSYYQQDELGAMYIYQLQAPLLALQFFADDLLSVLLLDTVGELRYQQLAGDFAAQPIDLTAAKDVTANI
LDVFHVDSQKVTTPPLSVQKVRAQLAANEPAEDHSPVLSDDDFDWQLLGQILKQNYVDLKQVASSRQLIITESRVYGISE
IEMAKLISEVASLTTGQFDENQLKLLIARRYERPAVSSQQVATEATVATTTKDNKASAQLSTAEQQLVTYAKQTAPYDFL
SALKQEKHGFVTSGENRLVHDLIGRGVLPNAVINMVIYYLLQNRELAALNRNLLETVANDWQQHGITTPEAALMYLKQRK
QPRSTPTRRKNNRPTRKEIMPKWAQQQQQTESGKQPAQTGKQITAAQRKQLADRLAKLETNSEKED
>Mature_465_residues
PNDEPLTPKTGLVVPQAPALSAAQQAVLAELYLPLMGPLAYSLYAALRSLQSSENELSNRRSHAELLGILNVDLPTVLAA
RRKLEATGLLRSYYQQDELGAMYIYQLQAPLLALQFFADDLLSVLLLDTVGELRYQQLAGDFAAQPIDLTAAKDVTANIL
DVFHVDSQKVTTPPLSVQKVRAQLAANEPAEDHSPVLSDDDFDWQLLGQILKQNYVDLKQVASSRQLIITESRVYGISEI
EMAKLISEVASLTTGQFDENQLKLLIARRYERPAVSSQQVATEATVATTTKDNKASAQLSTAEQQLVTYAKQTAPYDFLS
ALKQEKHGFVTSGENRLVHDLIGRGVLPNAVINMVIYYLLQNRELAALNRNLLETVANDWQQHGITTPEAALMYLKQRKQ
PRSTPTRRKNNRPTRKEIMPKWAQQQQQTESGKQPAQTGKQITAAQRKQLADRLAKLETNSEKED

Specific function: Probable component of primosome involved in the initiation of DNA replication. It is essential for both replication initiation and membrane attachment of the origin region of the chromosome and plasmid pUB110 [H]

COG id: COG3611

COG function: function code L; Replication initiation/membrane attachment protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006343 [H]

Pfam domain/function: PF07261 DnaB_2 [H]

EC number: NA

Molecular weight: Translated: 51869; Mature: 51737

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNDEPLTPKTGLVVPQAPALSAAQQAVLAELYLPLMGPLAYSLYAALRSLQSSENELSN
CCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRSHAELLGILNVDLPTVLAARRKLEATGLLRSYYQQDELGAMYIYQLQAPLLALQFFAD
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
DLLSVLLLDTVGELRYQQLAGDFAAQPIDLTAAKDVTANILDVFHVDSQKVTTPPLSVQK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
VRAQLAANEPAEDHSPVLSDDDFDWQLLGQILKQNYVDLKQVASSRQLIITESRVYGISE
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHCCCHH
IEMAKLISEVASLTTGQFDENQLKLLIARRYERPAVSSQQVATEATVATTTKDNKASAQL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCCHHHHH
STAEQQLVTYAKQTAPYDFLSALKQEKHGFVTSGENRLVHDLIGRGVLPNAVINMVIYYL
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCCCHHHHHHHCCCCCHHHHHHHHHHHH
LQNRELAALNRNLLETVANDWQQHGITTPEAALMYLKQRKQPRSTPTRRKNNRPTRKEIM
HCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
PKWAQQQQQTESGKQPAQTGKQITAAQRKQLADRLAKLETNSEKED
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PNDEPLTPKTGLVVPQAPALSAAQQAVLAELYLPLMGPLAYSLYAALRSLQSSENELSN
CCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRSHAELLGILNVDLPTVLAARRKLEATGLLRSYYQQDELGAMYIYQLQAPLLALQFFAD
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
DLLSVLLLDTVGELRYQQLAGDFAAQPIDLTAAKDVTANILDVFHVDSQKVTTPPLSVQK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
VRAQLAANEPAEDHSPVLSDDDFDWQLLGQILKQNYVDLKQVASSRQLIITESRVYGISE
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHCCCHH
IEMAKLISEVASLTTGQFDENQLKLLIARRYERPAVSSQQVATEATVATTTKDNKASAQL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCCHHHHH
STAEQQLVTYAKQTAPYDFLSALKQEKHGFVTSGENRLVHDLIGRGVLPNAVINMVIYYL
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCCCHHHHHHHCCCCCHHHHHHHHHHHH
LQNRELAALNRNLLETVANDWQQHGITTPEAALMYLKQRKQPRSTPTRRKNNRPTRKEIM
HCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
PKWAQQQQQTESGKQPAQTGKQITAAQRKQLADRLAKLETNSEKED
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3027697; 3027671; 8969504; 9387221; 9384377 [H]