Click here to switch to the map view.

The map label for this gene is 28378147

Identifier: 28378147

GI number: 28378147

Start: 1300481

End: 1301719

Strand: Direct

Name: 28378147

Synonym: lp_1419

Alternate gene names: NA

Gene position: 1300481-1301719 (Clockwise)

Preceding gene: 28378146

Following gene: 28378150

Centisome position: 39.31

GC content: 49.96

Gene sequence:

>1239_bases
GTGGCACGTGACGGGACCGTCACAGAGACAAATGATTTAAAATTGCACGCATTAGGGGAGATTATCGGGATGAACGAACA
AGAAGCATATGTAACGACATTTTATTGGCTCGCGGATTGTTGGTTGGAAACTAGCTATCTGGGACTTGAGGATGAATTTG
ACGACGATGAAATCGATGACGCCGTCAAGTCACTACTAAATCGGATGCAAGCCGGGGCAATTTATGAGGTAACGGCGGAT
GATCCAATGTGGCAAGCATGGAAGCGGGCAGTTAGGGCCGTGCTTACGCCCAATGATCATGCTGAACATGAAGTTGATGA
GACCGACGGAGAGGATGAATTAGTGCTACCAGCTGGGGTACGACCAGAACGTCAATTAGAAGAAGTTCAAGCCTATGCAG
CGATGAACGCGTTTTTGCAGGCACAAGATCAGGAATATCTGCAAGAAATTGGTAAACGGGCGGCCACTCAGGTCAGTGGT
GCCGGGTGGCAAGTGTGGCGTGCACATCGTCAGAGCATGCATCCGGAGTCTGCCGCCCCGCTGACGTTGACTGCTGAACA
ATTACCAGCCGTGATGTGGGCCTTTTTCGATAAGTACCAGGATACTGAGGACTCTTTTGAGATTTTTGAATTGGTTAATC
GACTTGAACAATGGCAAAAAAGTGCTGATCGAGATTTGGACGCGCAATGGTCACAGCTTGTGGCGAAAAGTCAGATTGAT
CCGGCCGCAATTACGCTCATGCAGGGCTTGTCGTTAGCGATTGAGTTCTTTGATCAGCTTGAGTGGGACGGTGATTTGAC
TGCCAAGGCAACTTTGCAGAATAAATTGATGCAACGCACGCTCGATGACACGCTCAATGATGAGACGACAGCCAACTGGA
CGGATGCCTGGCAACACTGGGATTTAGCAGATCCGTTGACAACTGAACAGTGGGCCCGACGGTTTGATCCGGCGGACGAC
TATGAAGACGATGAAGACGAGAGTGAAGAAGATGGCGCGGCTCGGCCAGCTTGGCAACTTGGTGCGAGTTATAGTACCGT
TTTGATTGCAATGCGCTTAGTCGCTTACGGTGTACTGCGGCCTGAGAGTGTGCCTGGTATGGCAACTGTGAAGATGGCGA
ACCGTGCACTGGCAGCTACCGTCAGTATTGGTATCGTGTTAGTTGCTTGGCTGGTCACAGCTATTCTGATTACAATTGTA
ATTTGGGGATGGCGGTGGCTGCGTAAGCTGATTTTTTAG

Upstream 100 bases:

>100_bases
TTGCATACGTGTTGAATTAGGGCACGTTGAGCAGTATTGGCGTGCACGATGCGCGTAATCTAGCGGCCAGACTGATTGAT
TAAACGATAATCCGGCAACT

Downstream 100 bases:

>100_bases
TGCAGCTGAACGGCCAACTGAATCACAATAGTGCCGATTGACTAGGCTGAAGTTTGTGAATCCAGTAGTTGAAGCTGAAA
GGACGGGGCGTCAGTGGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MARDGTVTETNDLKLHALGEIIGMNEQEAYVTTFYWLADCWLETSYLGLEDEFDDDEIDDAVKSLLNRMQAGAIYEVTAD
DPMWQAWKRAVRAVLTPNDHAEHEVDETDGEDELVLPAGVRPERQLEEVQAYAAMNAFLQAQDQEYLQEIGKRAATQVSG
AGWQVWRAHRQSMHPESAAPLTLTAEQLPAVMWAFFDKYQDTEDSFEIFELVNRLEQWQKSADRDLDAQWSQLVAKSQID
PAAITLMQGLSLAIEFFDQLEWDGDLTAKATLQNKLMQRTLDDTLNDETTANWTDAWQHWDLADPLTTEQWARRFDPADD
YEDDEDESEEDGAARPAWQLGASYSTVLIAMRLVAYGVLRPESVPGMATVKMANRALAATVSIGIVLVAWLVTAILITIV
IWGWRWLRKLIF

Sequences:

>Translated_412_residues
MARDGTVTETNDLKLHALGEIIGMNEQEAYVTTFYWLADCWLETSYLGLEDEFDDDEIDDAVKSLLNRMQAGAIYEVTAD
DPMWQAWKRAVRAVLTPNDHAEHEVDETDGEDELVLPAGVRPERQLEEVQAYAAMNAFLQAQDQEYLQEIGKRAATQVSG
AGWQVWRAHRQSMHPESAAPLTLTAEQLPAVMWAFFDKYQDTEDSFEIFELVNRLEQWQKSADRDLDAQWSQLVAKSQID
PAAITLMQGLSLAIEFFDQLEWDGDLTAKATLQNKLMQRTLDDTLNDETTANWTDAWQHWDLADPLTTEQWARRFDPADD
YEDDEDESEEDGAARPAWQLGASYSTVLIAMRLVAYGVLRPESVPGMATVKMANRALAATVSIGIVLVAWLVTAILITIV
IWGWRWLRKLIF
>Mature_411_residues
ARDGTVTETNDLKLHALGEIIGMNEQEAYVTTFYWLADCWLETSYLGLEDEFDDDEIDDAVKSLLNRMQAGAIYEVTADD
PMWQAWKRAVRAVLTPNDHAEHEVDETDGEDELVLPAGVRPERQLEEVQAYAAMNAFLQAQDQEYLQEIGKRAATQVSGA
GWQVWRAHRQSMHPESAAPLTLTAEQLPAVMWAFFDKYQDTEDSFEIFELVNRLEQWQKSADRDLDAQWSQLVAKSQIDP
AAITLMQGLSLAIEFFDQLEWDGDLTAKATLQNKLMQRTLDDTLNDETTANWTDAWQHWDLADPLTTEQWARRFDPADDY
EDDEDESEEDGAARPAWQLGASYSTVLIAMRLVAYGVLRPESVPGMATVKMANRALAATVSIGIVLVAWLVTAILITIVI
WGWRWLRKLIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46783; Mature: 46651

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDGTVTETNDLKLHALGEIIGMNEQEAYVTTFYWLADCWLETSYLGLEDEFDDDEIDD
CCCCCCCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
AVKSLLNRMQAGAIYEVTADDPMWQAWKRAVRAVLTPNDHAEHEVDETDGEDELVLPAGV
HHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCC
RPERQLEEVQAYAAMNAFLQAQDQEYLQEIGKRAATQVSGAGWQVWRAHRQSMHPESAAP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC
LTLTAEQLPAVMWAFFDKYQDTEDSFEIFELVNRLEQWQKSADRDLDAQWSQLVAKSQID
EEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
PAAITLMQGLSLAIEFFDQLEWDGDLTAKATLQNKLMQRTLDDTLNDETTANWTDAWQHW
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC
DLADPLTTEQWARRFDPADDYEDDEDESEEDGAARPAWQLGASYSTVLIAMRLVAYGVLR
CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCC
PESVPGMATVKMANRALAATVSIGIVLVAWLVTAILITIVIWGWRWLRKLIF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
ARDGTVTETNDLKLHALGEIIGMNEQEAYVTTFYWLADCWLETSYLGLEDEFDDDEIDD
CCCCCCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
AVKSLLNRMQAGAIYEVTADDPMWQAWKRAVRAVLTPNDHAEHEVDETDGEDELVLPAGV
HHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCC
RPERQLEEVQAYAAMNAFLQAQDQEYLQEIGKRAATQVSGAGWQVWRAHRQSMHPESAAP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC
LTLTAEQLPAVMWAFFDKYQDTEDSFEIFELVNRLEQWQKSADRDLDAQWSQLVAKSQID
EEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
PAAITLMQGLSLAIEFFDQLEWDGDLTAKATLQNKLMQRTLDDTLNDETTANWTDAWQHW
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC
DLADPLTTEQWARRFDPADDYEDDEDESEEDGAARPAWQLGASYSTVLIAMRLVAYGVLR
CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCC
PESVPGMATVKMANRALAATVSIGIVLVAWLVTAILITIVIWGWRWLRKLIF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA