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The map label for this gene is zntR [C]

Identifier: 28378085

GI number: 28378085

Start: 1233646

End: 1234038

Strand: Direct

Name: zntR [C]

Synonym: lp_1341

Alternate gene names: 28378085

Gene position: 1233646-1234038 (Clockwise)

Preceding gene: 28378076

Following gene: 28378086

Centisome position: 37.29

GC content: 38.17

Gene sequence:

>393_bases
TTGGATGATGAAGTCGCCAAATATACAACCCAAGAGATTTCAGTATTAGTTGGAATGAGTGTCTCTCAGGTCCATTACTA
TGATCGCCTGGGCCTAATTCCTAATCTAAGACGATCTGAGAATGGGTATCGTGTTTTTACGGAAAAGAATCTGATTTGGA
TGAAAAATTTGAAGATTTTTATTGATTCCGAAATGCCGTTGAAGGATATTCGTCAACTAACTGATTTAGTTGTTCAAGGC
AAGCAAGCAACAGCGGAAAAGCGTCAAGCGATTGTTGAACATCATCTGAAAGAATTAGAGAAAAAACAGGCTGAACTTAA
GAAACAGGTCGCATTCATGAACGGGTTTATTAAAACATATCAGCAAATGGAAAAGGAGTCCGATGAACGATGA

Upstream 100 bases:

>100_bases
GGGTATTATTCACCCAAGTCCAATTTGATTGGAAAAGCTTGCTATGAAGTATGGTTGATAGTTTATAATGAATCGCATGC
GAAAAAAGGAGGAACTAAAA

Downstream 100 bases:

>100_bases
ATACAGTTTTAGTTATTGGTGCAACTTCGCCAACTGCCCAGGCCTTCATTAAATTAATGGAACGTGATTATCCAGAAATG
ACTTTAAAATTATTTGTTCG

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MDDEVAKYTTQEISVLVGMSVSQVHYYDRLGLIPNLRRSENGYRVFTEKNLIWMKNLKIFIDSEMPLKDIRQLTDLVVQG
KQATAEKRQAIVEHHLKELEKKQAELKKQVAFMNGFIKTYQQMEKESDER

Sequences:

>Translated_130_residues
MDDEVAKYTTQEISVLVGMSVSQVHYYDRLGLIPNLRRSENGYRVFTEKNLIWMKNLKIFIDSEMPLKDIRQLTDLVVQG
KQATAEKRQAIVEHHLKELEKKQAELKKQVAFMNGFIKTYQQMEKESDER
>Mature_130_residues
MDDEVAKYTTQEISVLVGMSVSQVHYYDRLGLIPNLRRSENGYRVFTEKNLIWMKNLKIFIDSEMPLKDIRQLTDLVVQG
KQATAEKRQAIVEHHLKELEKKQAELKKQVAFMNGFIKTYQQMEKESDER

Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 15321; Mature: 15321

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDEVAKYTTQEISVLVGMSVSQVHYYDRLGLIPNLRRSENGYRVFTEKNLIWMKNLKIF
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEECEEEE
IDSEMPLKDIRQLTDLVVQGKQATAEKRQAIVEHHLKELEKKQAELKKQVAFMNGFIKTY
ECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQMEKESDER
HHHHHHCCCC
>Mature Secondary Structure
MDDEVAKYTTQEISVLVGMSVSQVHYYDRLGLIPNLRRSENGYRVFTEKNLIWMKNLKIF
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEECEEEE
IDSEMPLKDIRQLTDLVVQGKQATAEKRQAIVEHHLKELEKKQAELKKQVAFMNGFIKTY
ECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQMEKESDER
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]