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The map label for this gene is uspF [C]

Identifier: 28378071

GI number: 28378071

Start: 1218080

End: 1218586

Strand: Direct

Name: uspF [C]

Synonym: lp_1322

Alternate gene names: 28378071

Gene position: 1218080-1218586 (Clockwise)

Preceding gene: 28378070

Following gene: 28378072

Centisome position: 36.82

GC content: 49.31

Gene sequence:

>507_bases
ATGACGATGGTTAAACGCATTTTAGTCGGCATCGATACGAGTCCTCAGTCCCAATTAGCTTTAACGAAAGCAATTAAGAT
CGCGGTCGAGCAAAATGCCGCTTTGGATATTGTGACGGTCATTAATACTGAGAAATTTATTGGTGTGACTCAAGGGCCGA
TGGGTTTTGGCGCAACGACACCGCAGGCATTGAACGAATTGACGGCCGGTCTTAAAGCGAATCTCGCTAAGGCCCGCCAA
CAAGCGATGGCCGCGGGTGTCAGCGATGTGCGGGTTCACTTACATTCAGGTAATTCGAAGTTATTGTTAGCGACGACTTT
ACCAGACCGCTATGGCACTGACTTGATCGTTGTTGGGGCCACAGGTCTTAACAACGTGGCACGGGTGTTAATTGGCTCTA
ATGCTGCTTATGTGATTCGCAATGCTACCTGTGACACGTTGGTGGTGCGCACAGATGCTGATCAACAGCCAGTCAAACTG
CCAAAGCATACCACTCGTCGGCTTTGA

Upstream 100 bases:

>100_bases
AACCAATTGACGAATTAATGGCTGCAATGGCGATTTACGCTGAATCAATTGCCGTGTTAGCAACCGACAAATAGTGATCC
TTTAATGGAGGGTGATGGTT

Downstream 100 bases:

>100_bases
TTGAAATTTTTAGGACATCCGATAGTGTGTCCAGATAAACATTTGAGCGGCTTTTTCAAGCTCGATATCGGACACAGAGA
AAACCGACTCACGGTGGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTMVKRILVGIDTSPQSQLALTKAIKIAVEQNAALDIVTVINTEKFIGVTQGPMGFGATTPQALNELTAGLKANLAKARQ
QAMAAGVSDVRVHLHSGNSKLLLATTLPDRYGTDLIVVGATGLNNVARVLIGSNAAYVIRNATCDTLVVRTDADQQPVKL
PKHTTRRL

Sequences:

>Translated_168_residues
MTMVKRILVGIDTSPQSQLALTKAIKIAVEQNAALDIVTVINTEKFIGVTQGPMGFGATTPQALNELTAGLKANLAKARQ
QAMAAGVSDVRVHLHSGNSKLLLATTLPDRYGTDLIVVGATGLNNVARVLIGSNAAYVIRNATCDTLVVRTDADQQPVKL
PKHTTRRL
>Mature_167_residues
TMVKRILVGIDTSPQSQLALTKAIKIAVEQNAALDIVTVINTEKFIGVTQGPMGFGATTPQALNELTAGLKANLAKARQQ
AMAAGVSDVRVHLHSGNSKLLLATTLPDRYGTDLIVVGATGLNNVARVLIGSNAAYVIRNATCDTLVVRTDADQQPVKLP
KHTTRRL

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 17795; Mature: 17664

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMVKRILVGIDTSPQSQLALTKAIKIAVEQNAALDIVTVINTEKFIGVTQGPMGFGATT
CHHHHEEHHCCCCCCCHHHHHHHHEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCCC
PQALNELTAGLKANLAKARQQAMAAGVSDVRVHLHSGNSKLLLATTLPDRYGTDLIVVGA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEEEEC
TGLNNVARVLIGSNAAYVIRNATCDTLVVRTDADQQPVKLPKHTTRRL
CCCCHHEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCHHCCCC
>Mature Secondary Structure 
TMVKRILVGIDTSPQSQLALTKAIKIAVEQNAALDIVTVINTEKFIGVTQGPMGFGATT
HHHHEEHHCCCCCCCHHHHHHHHEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCCC
PQALNELTAGLKANLAKARQQAMAAGVSDVRVHLHSGNSKLLLATTLPDRYGTDLIVVGA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEEEEC
TGLNNVARVLIGSNAAYVIRNATCDTLVVRTDADQQPVKLPKHTTRRL
CCCCHHEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146 [H]