| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28378063
Identifier: 28378063
GI number: 28378063
Start: 1208146
End: 1208343
Strand: Direct
Name: 28378063
Synonym: lp_1313
Alternate gene names: NA
Gene position: 1208146-1208343 (Clockwise)
Preceding gene: 28378062
Following gene: 28378066
Centisome position: 36.52
GC content: 44.95
Gene sequence:
>198_bases ATGTTAATGATTATGACCATTTATGGGACCGTTAAGATGTTTACCCGAATGATCGTGTACTGTGGCATCGGTGGTCTTGT CCTAATTGTTCGTCACCATAATCGTAAGAAGCGGCGTAACGAGATGGACGAGGGAACTAAGCGGATCATGCGTAATACCC CTAAGGATGAGAACGGTAAGTATCCGTGGGAGAAGTAA
Upstream 100 bases:
>100_bases CAGAAGAAGCCGTTTTCAAACAGTGGCAAGCATTGTTAGATTACTTTAAGCCTGCTAAGGTCACGGCTTAAGTAGATTTG ACGGCAAGGGAGGACGCAAA
Downstream 100 bases:
>100_bases GGTACCATTGGTTTTTAAGTTAAGTATCTAATTGAAAAGACCTGTCAGACGAAGCTAATCGTCTGACAGGTCTTTTCGGC TAATTTATCGTTAAATTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MLMIMTIYGTVKMFTRMIVYCGIGGLVLIVRHHNRKKRRNEMDEGTKRIMRNTPKDENGKYPWEK
Sequences:
>Translated_65_residues MLMIMTIYGTVKMFTRMIVYCGIGGLVLIVRHHNRKKRRNEMDEGTKRIMRNTPKDENGKYPWEK >Mature_65_residues MLMIMTIYGTVKMFTRMIVYCGIGGLVLIVRHHNRKKRRNEMDEGTKRIMRNTPKDENGKYPWEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7788; Mature: 7788
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 10.8 %Met (Translated Protein) 12.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 10.8 %Met (Mature Protein) 12.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMIMTIYGTVKMFTRMIVYCGIGGLVLIVRHHNRKKRRNEMDEGTKRIMRNTPKDENGK CEEEEEHHHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCC YPWEK CCCCC >Mature Secondary Structure MLMIMTIYGTVKMFTRMIVYCGIGGLVLIVRHHNRKKRRNEMDEGTKRIMRNTPKDENGK CEEEEEHHHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCC YPWEK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA