Click here to switch to the map view.

The map label for this gene is 28378042

Identifier: 28378042

GI number: 28378042

Start: 1165862

End: 1166098

Strand: Direct

Name: 28378042

Synonym: lp_1281

Alternate gene names: NA

Gene position: 1165862-1166098 (Clockwise)

Preceding gene: 28378040

Following gene: 28378043

Centisome position: 35.24

GC content: 43.88

Gene sequence:

>237_bases
ATGGATAAATCTGAACTATCAGCAATTCTCAAACGACTAGAAGCCATGCGCACAACTGAAGCAACCGAAGTGCAATCACG
GCGGTTCGAAAAGGAAGGCGTTCAACGTGGGCAAGTAGCGTATGATCCCGCTACCTCGACGTACACGTTACAAGAATTCA
ATCCAGACCAAACGTTTGAATTTGATAACATTGACCTCGTGGCAATTGAATTATACGATTTGCTAACGGATAACTAG

Upstream 100 bases:

>100_bases
AAAATTTGTGGTAAAAATGGGCTTTCTACTAAAAAAACGTGTTATTAGTCCTATTTTTTGCTAGAATGTAAACAAAACTT
GAAGGAGCGAGATTAGTATA

Downstream 100 bases:

>100_bases
ATTCCCCCAAAATCCAGATAGATTTTCGATAGATCCATATTATGACGCGTTGTAATGTTGAAGAATTTTTGAAGAAATCT
TCAAGATATTGCTAACTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MDKSELSAILKRLEAMRTTEATEVQSRRFEKEGVQRGQVAYDPATSTYTLQEFNPDQTFEFDNIDLVAIELYDLLTDN

Sequences:

>Translated_78_residues
MDKSELSAILKRLEAMRTTEATEVQSRRFEKEGVQRGQVAYDPATSTYTLQEFNPDQTFEFDNIDLVAIELYDLLTDN
>Mature_78_residues
MDKSELSAILKRLEAMRTTEATEVQSRRFEKEGVQRGQVAYDPATSTYTLQEFNPDQTFEFDNIDLVAIELYDLLTDN

Specific function: Unknown

COG id: COG4703

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9008; Mature: 9008

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKSELSAILKRLEAMRTTEATEVQSRRFEKEGVQRGQVAYDPATSTYTLQEFNPDQTFE
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCCEE
FDNIDLVAIELYDLLTDN
CCCCCEEHHHHHHHHCCC
>Mature Secondary Structure
MDKSELSAILKRLEAMRTTEATEVQSRRFEKEGVQRGQVAYDPATSTYTLQEFNPDQTFE
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCCEE
FDNIDLVAIELYDLLTDN
CCCCCEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA