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The map label for this gene is 28378032

Identifier: 28378032

GI number: 28378032

Start: 1152851

End: 1153240

Strand: Direct

Name: 28378032

Synonym: lp_1267

Alternate gene names: NA

Gene position: 1152851-1153240 (Clockwise)

Preceding gene: 28378031

Following gene: 28378033

Centisome position: 34.85

GC content: 42.82

Gene sequence:

>390_bases
ATGCAACAACCAATTAATTATATTATGAATATCATGCACCTTGAACGGGACTTAAAACGACTTACGTCGAACTGGTCGTC
CGCCACAGGGCTTAGTTTGAACGAGTTACGGATCTTAGTTTATGTCGAACAACATCCTGGTATCCAGATTGGTGATGTGG
CAAATGCGTTGAATGTGGCGAAAGCCTCGTTGGCACAAAATATTGGCACCTTGATAACCCAAGGATGGTTGAAAAGTCAA
CCAATTAAACAAGACCGGCGTTTACGGGTCTTAACGCTTACGAAGGCTGGTCAGGATCGAATGAAGGATGTTGATGCACA
ATTGACTAAATCACTTGACACGACACCAGCAACACAGTTAGCGGATCAATTATCAGCTTTGCAATTATAG

Upstream 100 bases:

>100_bases
AATCAATTCGCACTATTTTTTTAAAATCATGCGAAGGGACAATGGCTTGTTTTGAACGGTTAATGAAAAAAGTACAAATT
TCAGGAAGGATGCTGTTAGT

Downstream 100 bases:

>100_bases
GCAGATGTACACGTTCACGGATATTAAGTGAAGTAATATCCTTAACGCGGGATAAAGGGGAGACTCTTTGTCCCGCGCTT
TTGTTTTAGCACTTAATAGT

Product: transcription regulator (putative)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MQQPINYIMNIMHLERDLKRLTSNWSSATGLSLNELRILVYVEQHPGIQIGDVANALNVAKASLAQNIGTLITQGWLKSQ
PIKQDRRLRVLTLTKAGQDRMKDVDAQLTKSLDTTPATQLADQLSALQL

Sequences:

>Translated_129_residues
MQQPINYIMNIMHLERDLKRLTSNWSSATGLSLNELRILVYVEQHPGIQIGDVANALNVAKASLAQNIGTLITQGWLKSQ
PIKQDRRLRVLTLTKAGQDRMKDVDAQLTKSLDTTPATQLADQLSALQL
>Mature_129_residues
MQQPINYIMNIMHLERDLKRLTSNWSSATGLSLNELRILVYVEQHPGIQIGDVANALNVAKASLAQNIGTLITQGWLKSQ
PIKQDRRLRVLTLTKAGQDRMKDVDAQLTKSLDTTPATQLADQLSALQL

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14376; Mature: 14376

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQPINYIMNIMHLERDLKRLTSNWSSATGLSLNELRILVYVEQHPGIQIGDVANALNVA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEEEECCCCEEHHHHHHHHHHH
KASLAQNIGTLITQGWLKSQPIKQDRRLRVLTLTKAGQDRMKDVDAQLTKSLDTTPATQL
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHH
ADQLSALQL
HHHHHHHCC
>Mature Secondary Structure
MQQPINYIMNIMHLERDLKRLTSNWSSATGLSLNELRILVYVEQHPGIQIGDVANALNVA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEEEECCCCEEHHHHHHHHHHH
KASLAQNIGTLITQGWLKSQPIKQDRRLRVLTLTKAGQDRMKDVDAQLTKSLDTTPATQL
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHH
ADQLSALQL
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA